RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 MS4A1P11836 297 aa18.73■□□□□ 0.59
SMCO2-204ENST00000538647 FAM217BQ9NTX9 383 aaPredicted RBP18.73■□□□□ 0.59
SMCO2-204ENST00000538647 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
SMCO2-204ENST00000538647 STAC3Q96MF2 364 aa18.71■□□□□ 0.59
SMCO2-204ENST00000538647 SWT1Q5T5J6 900 aaKnown RBP18.7■□□□□ 0.58
SMCO2-204ENST00000538647 FAM117AQ9C073 453 aa18.7■□□□□ 0.58
SMCO2-204ENST00000538647 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
SMCO2-204ENST00000538647 IL27Q8NEV9 243 aa18.67■□□□□ 0.58
SMCO2-204ENST00000538647 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
SMCO2-204ENST00000538647 SAMD7Q7Z3H4 446 aa18.66■□□□□ 0.58
SMCO2-204ENST00000538647 DDX11L8A8MPP1 907 aa18.64■□□□□ 0.57
SMCO2-204ENST00000538647 SULF1Q8IWU6 871 aa18.63■□□□□ 0.57
SMCO2-204ENST00000538647 GOLGA8CPA6NN73 597 aa18.62■□□□□ 0.57
SMCO2-204ENST00000538647 TMEM132AQ24JP5 1023 aa18.62■□□□□ 0.57
SMCO2-204ENST00000538647 DDRGK1Q96HY6 314 aa18.62■□□□□ 0.57
SMCO2-204ENST00000538647 BEGAINQ9BUH8 593 aa18.6■□□□□ 0.57
SMCO2-204ENST00000538647 PLEKHG3A1L390 1219 aa18.59■□□□□ 0.57
SMCO2-204ENST00000538647 RDH13Q8NBN7 331 aa18.58■□□□□ 0.56
SMCO2-204ENST00000538647 RNF40O75150 1001 aa18.57■□□□□ 0.56
SMCO2-204ENST00000538647 CD46P15529 392 aa18.57■□□□□ 0.56
SMCO2-204ENST00000538647 SLC4A3P48751 1232 aa18.56■□□□□ 0.56
SMCO2-204ENST00000538647 SLF2Q8IX21 1173 aa18.56■□□□□ 0.56
SMCO2-204ENST00000538647 ANKK1Q8NFD2 765 aa18.56■□□□□ 0.56
SMCO2-204ENST00000538647 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
SMCO2-204ENST00000538647 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.54■□□□□ 0.56
SMCO2-204ENST00000538647 SLC10A3P09131 477 aa18.53■□□□□ 0.56
SMCO2-204ENST00000538647 WNT2BQ93097 391 aa18.53■□□□□ 0.56
SMCO2-204ENST00000538647 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.56
SMCO2-204ENST00000538647 BCAMP50895 628 aa18.49■□□□□ 0.55
SMCO2-204ENST00000538647 SOWAHBA6NEL2 793 aa18.48■□□□□ 0.55
SMCO2-204ENST00000538647 PCDH10Q9P2E7 1040 aa18.46■□□□□ 0.55
SMCO2-204ENST00000538647 GCGRP47871 477 aa18.44■□□□□ 0.54
SMCO2-204ENST00000538647 KCTD12Q96CX2 325 aaKnown RBP18.43■□□□□ 0.54
SMCO2-204ENST00000538647 TBC1D2Q9BYX2 928 aa18.43■□□□□ 0.54
SMCO2-204ENST00000538647 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
SMCO2-204ENST00000538647 CFHP08603 1231 aa18.42■□□□□ 0.54
SMCO2-204ENST00000538647 NUTM1Q86Y26 1132 aa18.42■□□□□ 0.54
SMCO2-204ENST00000538647 SPIRE2Q8WWL2 714 aa18.41■□□□□ 0.54
SMCO2-204ENST00000538647 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
SMCO2-204ENST00000538647 THSD4Q6ZMP0 1018 aa18.39■□□□□ 0.53
SMCO2-204ENST00000538647 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
SMCO2-204ENST00000538647 TSR3Q9UJK0 312 aaKnown RBP18.39■□□□□ 0.53
SMCO2-204ENST00000538647 KDM4AO75164 1064 aa18.38■□□□□ 0.53
SMCO2-204ENST00000538647 PPP4CP60510 307 aa18.38■□□□□ 0.53
SMCO2-204ENST00000538647 SH3D19Q5HYK7 790 aa18.38■□□□□ 0.53
SMCO2-204ENST00000538647 DIXDC1Q155Q3 683 aa18.37■□□□□ 0.53
SMCO2-204ENST00000538647 MYSM1Q5VVJ2 828 aa18.37■□□□□ 0.53
SMCO2-204ENST00000538647 GOPCQ9HD26 462 aa18.36■□□□□ 0.53
SMCO2-204ENST00000538647 MYT1LQ9UL68 1186 aa18.36■□□□□ 0.53
SMCO2-204ENST00000538647 KMT5BQ4FZB7 885 aa18.34■□□□□ 0.53
SMCO2-204ENST00000538647 POLR3EQ9NVU0 708 aa18.34■□□□□ 0.53
SMCO2-204ENST00000538647 WBP1LQ9NX94 342 aa18.33■□□□□ 0.52
SMCO2-204ENST00000538647 SKIV2LQ15477 1246 aaKnown RBP18.32■□□□□ 0.52
SMCO2-204ENST00000538647 USP46P62068 366 aa18.31■□□□□ 0.52
SMCO2-204ENST00000538647 FUT2Q10981 343 aa18.31■□□□□ 0.52
SMCO2-204ENST00000538647 SPNS2Q8IVW8 549 aa18.3■□□□□ 0.52
SMCO2-204ENST00000538647 MOXD2PA6NHM9 499 aa18.29■□□□□ 0.52
SMCO2-204ENST00000538647 HOXA2O43364 376 aa18.29■□□□□ 0.52
SMCO2-204ENST00000538647 APLP1P51693 650 aa18.29■□□□□ 0.52
SMCO2-204ENST00000538647 PCMTD1Q96MG8 357 aaPredicted RBP18.29■□□□□ 0.52
SMCO2-204ENST00000538647 PRR14Q9BWN1 585 aa18.28■□□□□ 0.52
SMCO2-204ENST00000538647 NDUFV2P19404 249 aa18.27■□□□□ 0.52
SMCO2-204ENST00000538647 CLK2P49760 499 aaKnown RBP18.27■□□□□ 0.52
SMCO2-204ENST00000538647 RIC3Q7Z5B4 369 aa18.27■□□□□ 0.52
SMCO2-204ENST00000538647 ACTN4O43707 911 aaKnown RBP18.26■□□□□ 0.51
SMCO2-204ENST00000538647 PTPN5P54829 565 aa18.26■□□□□ 0.51
SMCO2-204ENST00000538647 LIMD1Q9UGP4 676 aa18.26■□□□□ 0.51
SMCO2-204ENST00000538647 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
SMCO2-204ENST00000538647 PROCA1Q8NCQ7 364 aaPredicted RBP18.25■□□□□ 0.51
SMCO2-204ENST00000538647 HLA-CQ95604 372 aa18.25■□□□□ 0.51
SMCO2-204ENST00000538647 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
SMCO2-204ENST00000538647 SPTLC1O15269 473 aa18.23■□□□□ 0.51
SMCO2-204ENST00000538647 ATP6V1AP38606 617 aa18.23■□□□□ 0.51
SMCO2-204ENST00000538647 GRIPAP1Q4V328 841 aa18.22■□□□□ 0.51
SMCO2-204ENST00000538647 GUCA2AQ02747 115 aa18.21■□□□□ 0.51
SMCO2-204ENST00000538647 PUS10Q3MIT2 529 aaKnown RBP18.2■□□□□ 0.5
SMCO2-204ENST00000538647 FDX1P10109 184 aa18.19■□□□□ 0.5
SMCO2-204ENST00000538647 GJA5P36382 358 aa18.19■□□□□ 0.5
SMCO2-204ENST00000538647 RNF166Q96A37 237 aaPredicted RBP18.19■□□□□ 0.5
SMCO2-204ENST00000538647 CSPP1Q1MSJ5 1256 aa18.18■□□□□ 0.5
SMCO2-204ENST00000538647 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.17■□□□□ 0.5
SMCO2-204ENST00000538647 PCDHB3Q9Y5E6 796 aa18.17■□□□□ 0.5
SMCO2-204ENST00000538647 GTF3C3Q9Y5Q9 886 aa18.17■□□□□ 0.5
SMCO2-204ENST00000538647 MORN1Q5T089 497 aa18.16■□□□□ 0.5
SMCO2-204ENST00000538647 NYAP1Q6ZVC0 841 aa18.16■□□□□ 0.5
SMCO2-204ENST00000538647 PCDHGC3Q9UN70 934 aa18.16■□□□□ 0.5
SMCO2-204ENST00000538647 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
SMCO2-204ENST00000538647 TUSC1Q2TAM9 212 aa18.14■□□□□ 0.49
SMCO2-204ENST00000538647 SLC27A5Q9Y2P5 690 aa18.12■□□□□ 0.49
SMCO2-204ENST00000538647 BLOC1S3Q6QNY0 202 aa18.11■□□□□ 0.49
SMCO2-204ENST00000538647 QPCTQ16769 361 aa18.1■□□□□ 0.49
SMCO2-204ENST00000538647 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
SMCO2-204ENST00000538647 CABLES1Q8TDN4 633 aa18.08■□□□□ 0.48
SMCO2-204ENST00000538647 COPS2P61201 443 aa18.07■□□□□ 0.48
SMCO2-204ENST00000538647 HCSTQ9UBK5 93 aa18.07■□□□□ 0.48
SMCO2-204ENST00000538647 LILRB3O75022 631 aa18.06■□□□□ 0.48
SMCO2-204ENST00000538647 PRPF38BQ5VTL8 546 aaKnown RBP18.06■□□□□ 0.48
SMCO2-204ENST00000538647 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
SMCO2-204ENST00000538647 NR1I2O75469 434 aa18.05■□□□□ 0.48
SMCO2-204ENST00000538647 HRCP23327 699 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms