RNA–Protein interactions for RNA: ENST00000538564.5

FOXM1-208, Transcript of forkhead box M1, humanhuman

TSL 3

Gene FOXM1, Length 693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-208ENST00000538564 ADGRB3O60242 1522 aa12.41□□□□□ -0.42
FOXM1-208ENST00000538564 SLIT1O75093 1534 aa12.41□□□□□ -0.42
FOXM1-208ENST00000538564 TRPM2O94759 1503 aa12.41□□□□□ -0.42
FOXM1-208ENST00000538564 ANKRD30BQ9BXX2 1392 aa12.41□□□□□ -0.42
FOXM1-208ENST00000538564 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
FOXM1-208ENST00000538564 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.42
FOXM1-208ENST00000538564 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
FOXM1-208ENST00000538564 HDGFP51858 240 aaKnown RBP12.4□□□□□ -0.42
FOXM1-208ENST00000538564 TXNDC2Q86VQ3 553 aa12.4□□□□□ -0.42
FOXM1-208ENST00000538564 SCAF11Q99590 1463 aaKnown RBP12.39□□□□□ -0.43
FOXM1-208ENST00000538564 LTKP29376 864 aa12.38□□□□□ -0.43
FOXM1-208ENST00000538564 MED14O60244 1454 aa12.38□□□□□ -0.43
FOXM1-208ENST00000538564 CPS1P31327 1500 aa12.37□□□□□ -0.43
FOXM1-208ENST00000538564 TMEM131LA2VDJ0 1609 aa12.37□□□□□ -0.43
FOXM1-208ENST00000538564 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.37□□□□□ -0.43
FOXM1-208ENST00000538564 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
FOXM1-208ENST00000538564 NPHP4O75161 1426 aaPredicted RBP12.37□□□□□ -0.43
FOXM1-208ENST00000538564 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
FOXM1-208ENST00000538564 NEURL4Q96JN8 1562 aa12.35□□□□□ -0.43
FOXM1-208ENST00000538564 ZNF326Q5BKZ1 582 aaKnown RBP12.35□□□□□ -0.43
FOXM1-208ENST00000538564 CCER1Q8TC90 406 aaPredicted RBP12.35□□□□□ -0.43
FOXM1-208ENST00000538564 CLTCL1P53675 1640 aa12.35□□□□□ -0.43
FOXM1-208ENST00000538564 ZFYVE9O95405 1425 aa12.35□□□□□ -0.43
FOXM1-208ENST00000538564 POLR1AO95602 1720 aaPredicted RBP12.34□□□□□ -0.43
FOXM1-208ENST00000538564 PPP1R15AO75807 674 aaPredicted RBP12.34□□□□□ -0.43
FOXM1-208ENST00000538564 POTEAQ6S8J7 498 aa12.34□□□□□ -0.43
FOXM1-208ENST00000538564 SIN3AQ96ST3 1273 aa12.34□□□□□ -0.43
FOXM1-208ENST00000538564 RPGRIP1LQ68CZ1 1315 aa12.33□□□□□ -0.44
FOXM1-208ENST00000538564 CLSPNQ9HAW4 1339 aa12.32□□□□□ -0.44
FOXM1-208ENST00000538564 PLEKHG1Q9ULL1 1385 aa12.31□□□□□ -0.44
FOXM1-208ENST00000538564 ALKQ9UM73 1620 aa12.31□□□□□ -0.44
FOXM1-208ENST00000538564 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
FOXM1-208ENST00000538564 KIF1BO60333 1816 aa12.3□□□□□ -0.44
FOXM1-208ENST00000538564 MYO5BQ9ULV0 1848 aa12.3□□□□□ -0.44
FOXM1-208ENST00000538564 BCANQ96GW7 911 aa12.3□□□□□ -0.44
FOXM1-208ENST00000538564 SPATA31E1Q6ZUB1 1445 aa12.29□□□□□ -0.44
FOXM1-208ENST00000538564 VGFO15240 615 aaPredicted RBP12.29□□□□□ -0.44
FOXM1-208ENST00000538564 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
FOXM1-208ENST00000538564 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
FOXM1-208ENST00000538564 RGL3Q3MIN7 710 aa12.28□□□□□ -0.44
FOXM1-208ENST00000538564 SLC26A8Q96RN1 970 aa12.28□□□□□ -0.44
FOXM1-208ENST00000538564 TBX22Q9Y458 520 aa12.27□□□□□ -0.45
FOXM1-208ENST00000538564 NEXMIFQ5QGS0 1516 aa12.27□□□□□ -0.45
FOXM1-208ENST00000538564 ADAMTS13Q76LX8 1427 aa12.25□□□□□ -0.45
FOXM1-208ENST00000538564 KCNA6P17658 529 aa12.24□□□□□ -0.45
FOXM1-208ENST00000538564 PIK3R4Q99570 1358 aa12.23□□□□□ -0.45
FOXM1-208ENST00000538564 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
FOXM1-208ENST00000538564 DIP2AQ14689 1571 aa12.22□□□□□ -0.45
FOXM1-208ENST00000538564 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
FOXM1-208ENST00000538564 LRRC7Q96NW7 1537 aa12.22□□□□□ -0.45
FOXM1-208ENST00000538564 L3MBTL2Q969R5 705 aa12.22□□□□□ -0.45
FOXM1-208ENST00000538564 ADGRF5Q8IZF2 1346 aa12.21□□□□□ -0.45
FOXM1-208ENST00000538564 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
FOXM1-208ENST00000538564 PPLO60437 1756 aa12.2□□□□□ -0.46
FOXM1-208ENST00000538564 DCAF11Q8TEB1 546 aa12.19□□□□□ -0.46
FOXM1-208ENST00000538564 MYOM2P54296 1465 aa12.19□□□□□ -0.46
FOXM1-208ENST00000538564 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
FOXM1-208ENST00000538564 TONSLQ96HA7 1378 aa12.18□□□□□ -0.46
FOXM1-208ENST00000538564 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
FOXM1-208ENST00000538564 KDM2AQ9Y2K7 1162 aa12.18□□□□□ -0.46
FOXM1-208ENST00000538564 NKTRP30414 1462 aaKnown RBP12.18□□□□□ -0.46
FOXM1-208ENST00000538564 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
FOXM1-208ENST00000538564 METP08581 1390 aa12.18□□□□□ -0.46
FOXM1-208ENST00000538564 NRXN1Q9ULB1 1477 aa12.17□□□□□ -0.46
FOXM1-208ENST00000538564 AMOTL2Q9Y2J4 779 aa12.17□□□□□ -0.46
FOXM1-208ENST00000538564 NWD1Q149M9 1564 aa12.17□□□□□ -0.46
FOXM1-208ENST00000538564 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
FOXM1-208ENST00000538564 PROSER2Q86WR7 435 aaPredicted RBP12.16□□□□□ -0.46
FOXM1-208ENST00000538564 C14orf93Q9H972 538 aaKnown RBP12.16□□□□□ -0.46
FOXM1-208ENST00000538564 STRCP1A6NGW2 1772 aa12.15□□□□□ -0.46
FOXM1-208ENST00000538564 FAM135BQ49AJ0 1406 aa12.15□□□□□ -0.46
FOXM1-208ENST00000538564 PTPRUQ92729 1446 aa12.15□□□□□ -0.46
FOXM1-208ENST00000538564 TMEM94Q12767 1356 aa12.15□□□□□ -0.46
FOXM1-208ENST00000538564 CHD2O14647 1828 aaKnown RBP12.14□□□□□ -0.47
FOXM1-208ENST00000538564 NBPF8Q3BBV2 869 aa12.14□□□□□ -0.47
FOXM1-208ENST00000538564 SRCAPQ6ZRS2 3230 aa12.14□□□□□ -0.47
FOXM1-208ENST00000538564 NCOA3Q9Y6Q9 1424 aa12.13□□□□□ -0.47
FOXM1-208ENST00000538564 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
FOXM1-208ENST00000538564 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
FOXM1-208ENST00000538564 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
FOXM1-208ENST00000538564 LRPPRCP42704 1394 aaKnown RBP12.11□□□□□ -0.47
FOXM1-208ENST00000538564 PTCH1Q13635 1447 aa12.11□□□□□ -0.47
FOXM1-208ENST00000538564 MSH6P52701 1360 aa12.1□□□□□ -0.47
FOXM1-208ENST00000538564 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
FOXM1-208ENST00000538564 TMEM132EQ6IEE7 984 aa12.1□□□□□ -0.47
FOXM1-208ENST00000538564 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
FOXM1-208ENST00000538564 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
FOXM1-208ENST00000538564 XRN1Q8IZH2 1706 aaKnown RBP12.1□□□□□ -0.47
FOXM1-208ENST00000538564 LAMC1P11047 1609 aa12.09□□□□□ -0.47
FOXM1-208ENST00000538564 TECPR2O15040 1411 aa12.09□□□□□ -0.47
FOXM1-208ENST00000538564 ROBO2Q9HCK4 1378 aa12.08□□□□□ -0.48
FOXM1-208ENST00000538564 SIRT1Q96EB6 747 aa12.08□□□□□ -0.48
FOXM1-208ENST00000538564 C19orf44Q9H6X5 657 aa12.08□□□□□ -0.48
FOXM1-208ENST00000538564 STK26Q9P289 416 aa12.08□□□□□ -0.48
FOXM1-208ENST00000538564 YTHDC2Q9H6S0 1430 aaKnown RBP12.08□□□□□ -0.48
FOXM1-208ENST00000538564 ASXL1Q8IXJ9 1541 aa12.07□□□□□ -0.48
FOXM1-208ENST00000538564 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
FOXM1-208ENST00000538564 ZEB1P37275 1124 aaPredicted RBP12.06□□□□□ -0.48
FOXM1-208ENST00000538564 ZNF772Q68DY9 489 aaPredicted RBP12.06□□□□□ -0.48
FOXM1-208ENST00000538564 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms