RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.48■□□□□ 0.55
CDK2AP1-204ENST00000538446 NEURL4Q96JN8 1562 aa18.47■□□□□ 0.55
CDK2AP1-204ENST00000538446 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
CDK2AP1-204ENST00000538446 ZFYVE9O95405 1425 aa18.46■□□□□ 0.55
CDK2AP1-204ENST00000538446 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.54
CDK2AP1-204ENST00000538446 KIF1BO60333 1816 aa18.45■□□□□ 0.54
CDK2AP1-204ENST00000538446 NCKAP5LQ9HCH0 1330 aa18.45■□□□□ 0.54
CDK2AP1-204ENST00000538446 LTKP29376 864 aa18.44■□□□□ 0.54
CDK2AP1-204ENST00000538446 NUTM2DQ5VT03 806 aaPredicted RBP18.44■□□□□ 0.54
CDK2AP1-204ENST00000538446 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
CDK2AP1-204ENST00000538446 NEXMIFQ5QGS0 1516 aa18.41■□□□□ 0.54
CDK2AP1-204ENST00000538446 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
CDK2AP1-204ENST00000538446 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
CDK2AP1-204ENST00000538446 BCANQ96GW7 911 aa18.4■□□□□ 0.54
CDK2AP1-204ENST00000538446 STAC3Q96MF2 364 aa18.4■□□□□ 0.54
CDK2AP1-204ENST00000538446 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
CDK2AP1-204ENST00000538446 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
CDK2AP1-204ENST00000538446 PLEKHG1Q9ULL1 1385 aa18.39■□□□□ 0.53
CDK2AP1-204ENST00000538446 MED14O60244 1454 aa18.39■□□□□ 0.53
CDK2AP1-204ENST00000538446 MYO5BQ9ULV0 1848 aa18.38■□□□□ 0.53
CDK2AP1-204ENST00000538446 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
CDK2AP1-204ENST00000538446 KDM2AQ9Y2K7 1162 aa18.37■□□□□ 0.53
CDK2AP1-204ENST00000538446 MYOM2P54296 1465 aa18.36■□□□□ 0.53
CDK2AP1-204ENST00000538446 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
CDK2AP1-204ENST00000538446 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
CDK2AP1-204ENST00000538446 POLR1AO95602 1720 aaPredicted RBP18.34■□□□□ 0.53
CDK2AP1-204ENST00000538446 STRCQ7RTU9 1775 aa18.33■□□□□ 0.53
CDK2AP1-204ENST00000538446 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
CDK2AP1-204ENST00000538446 PPLO60437 1756 aa18.32■□□□□ 0.52
CDK2AP1-204ENST00000538446 SLC26A8Q96RN1 970 aa18.32■□□□□ 0.52
CDK2AP1-204ENST00000538446 NRXN1Q9ULB1 1477 aa18.31■□□□□ 0.52
CDK2AP1-204ENST00000538446 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
CDK2AP1-204ENST00000538446 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
CDK2AP1-204ENST00000538446 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
CDK2AP1-204ENST00000538446 IFT172Q9UG01 1749 aa18.29■□□□□ 0.52
CDK2AP1-204ENST00000538446 TBX22Q9Y458 520 aa18.29■□□□□ 0.52
CDK2AP1-204ENST00000538446 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
CDK2AP1-204ENST00000538446 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
CDK2AP1-204ENST00000538446 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
CDK2AP1-204ENST00000538446 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
CDK2AP1-204ENST00000538446 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
CDK2AP1-204ENST00000538446 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
CDK2AP1-204ENST00000538446 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
CDK2AP1-204ENST00000538446 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
CDK2AP1-204ENST00000538446 METP08581 1390 aa18.22■□□□□ 0.51
CDK2AP1-204ENST00000538446 ZNF335Q9H4Z2 1342 aaPredicted RBP18.21■□□□□ 0.51
CDK2AP1-204ENST00000538446 NBPF8Q3BBV2 869 aa18.2■□□□□ 0.5
CDK2AP1-204ENST00000538446 LAMC1P11047 1609 aa18.2■□□□□ 0.5
CDK2AP1-204ENST00000538446 KCNA6P17658 529 aa18.19■□□□□ 0.5
CDK2AP1-204ENST00000538446 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
CDK2AP1-204ENST00000538446 AMOTL2Q9Y2J4 779 aa18.17■□□□□ 0.5
CDK2AP1-204ENST00000538446 ROCK2O75116 1388 aaKnown RBP18.16■□□□□ 0.5
CDK2AP1-204ENST00000538446 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
CDK2AP1-204ENST00000538446 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
CDK2AP1-204ENST00000538446 STK26Q9P289 416 aa18.15■□□□□ 0.5
CDK2AP1-204ENST00000538446 LRPPRCP42704 1394 aaKnown RBP18.15■□□□□ 0.5
CDK2AP1-204ENST00000538446 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
CDK2AP1-204ENST00000538446 ASXL1Q8IXJ9 1541 aa18.14■□□□□ 0.49
CDK2AP1-204ENST00000538446 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.49
CDK2AP1-204ENST00000538446 ADGRB1O14514 1584 aa18.13■□□□□ 0.49
CDK2AP1-204ENST00000538446 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
CDK2AP1-204ENST00000538446 SETD1AO15047 1707 aaKnown RBP18.13■□□□□ 0.49
CDK2AP1-204ENST00000538446 ABCC11Q96J66 1382 aa18.13■□□□□ 0.49
CDK2AP1-204ENST00000538446 RALGAPBQ86X10 1494 aa18.13■□□□□ 0.49
CDK2AP1-204ENST00000538446 CPS1P31327 1500 aa18.12■□□□□ 0.49
CDK2AP1-204ENST00000538446 KIAA1210Q9ULL0 1709 aa18.12■□□□□ 0.49
CDK2AP1-204ENST00000538446 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
CDK2AP1-204ENST00000538446 TRPM1Q7Z4N2 1603 aa18.1■□□□□ 0.49
CDK2AP1-204ENST00000538446 TECPR2O15040 1411 aa18.1■□□□□ 0.49
CDK2AP1-204ENST00000538446 PTCH1Q13635 1447 aa18.1■□□□□ 0.49
CDK2AP1-204ENST00000538446 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
CDK2AP1-204ENST00000538446 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
CDK2AP1-204ENST00000538446 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
CDK2AP1-204ENST00000538446 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
CDK2AP1-204ENST00000538446 LTBP4Q8N2S1 1624 aa18.09■□□□□ 0.49
CDK2AP1-204ENST00000538446 ROBO2Q9HCK4 1378 aa18.08■□□□□ 0.49
CDK2AP1-204ENST00000538446 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
CDK2AP1-204ENST00000538446 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
CDK2AP1-204ENST00000538446 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
CDK2AP1-204ENST00000538446 TMEM94Q12767 1356 aa18.06■□□□□ 0.48
CDK2AP1-204ENST00000538446 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
CDK2AP1-204ENST00000538446 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
CDK2AP1-204ENST00000538446 DLC1Q96QB1 1528 aa18.05■□□□□ 0.48
CDK2AP1-204ENST00000538446 C14orf37Q86TY3 774 aa18.05■□□□□ 0.48
CDK2AP1-204ENST00000538446 PRAM1Q96QH2 718 aa18.05■□□□□ 0.48
CDK2AP1-204ENST00000538446 POGKQ9P215 609 aa18.05■□□□□ 0.48
CDK2AP1-204ENST00000538446 EIF3AQ14152 1382 aaKnown RBP18.04■□□□□ 0.48
CDK2AP1-204ENST00000538446 WAPLQ7Z5K2 1190 aa18.04■□□□□ 0.48
CDK2AP1-204ENST00000538446 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
CDK2AP1-204ENST00000538446 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
CDK2AP1-204ENST00000538446 NCOA3Q9Y6Q9 1424 aa18.03■□□□□ 0.48
CDK2AP1-204ENST00000538446 KNDC1Q76NI1 1749 aa18.02■□□□□ 0.48
CDK2AP1-204ENST00000538446 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.47
CDK2AP1-204ENST00000538446 SAFB2Q14151 953 aaKnown RBP eCLIP18.01■□□□□ 0.47
CDK2AP1-204ENST00000538446 CERKQ8TCT0 537 aa18.01■□□□□ 0.47
CDK2AP1-204ENST00000538446 CENPJQ9HC77 1338 aaPredicted RBP17.99■□□□□ 0.47
CDK2AP1-204ENST00000538446 MSH6P52701 1360 aa17.99■□□□□ 0.47
CDK2AP1-204ENST00000538446 USP47Q96K76 1375 aa17.99■□□□□ 0.47
CDK2AP1-204ENST00000538446 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
CDK2AP1-204ENST00000538446 C19orf44Q9H6X5 657 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms