RNA–Protein interactions for RNA: ENST00000538144.5

PXN-208, Transcript of paxillin, humanhuman

TSL 1 (best)

Gene PXN, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-208ENST00000538144 RPGRIP1LQ68CZ1 1315 aa21.3■■□□□ 1
PXN-208ENST00000538144 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
PXN-208ENST00000538144 USP47Q96K76 1375 aa21.29■■□□□ 1
PXN-208ENST00000538144 TNRQ92752 1358 aa21.28■■□□□ 1
PXN-208ENST00000538144 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
PXN-208ENST00000538144 NEXMIFQ5QGS0 1516 aa21.27■■□□□ 1
PXN-208ENST00000538144 RIMS1Q86UR5 1692 aaKnown RBP21.26■□□□□ 0.99
PXN-208ENST00000538144 NRXN1Q9ULB1 1477 aa21.25■□□□□ 0.99
PXN-208ENST00000538144 GPRASP1Q5JY77 1395 aa21.24■□□□□ 0.99
PXN-208ENST00000538144 ADAMTSL3P82987 1691 aa21.23■□□□□ 0.99
PXN-208ENST00000538144 KIAA1210Q9ULL0 1709 aa21.23■□□□□ 0.99
PXN-208ENST00000538144 VGFO15240 615 aaPredicted RBP21.23■□□□□ 0.99
PXN-208ENST00000538144 CFAP70Q5T0N1 1121 aa21.23■□□□□ 0.99
PXN-208ENST00000538144 LAMC1P11047 1609 aa21.23■□□□□ 0.99
PXN-208ENST00000538144 A2ML1A8K2U0 1454 aa21.23■□□□□ 0.99
PXN-208ENST00000538144 PIK3C2GO75747 1445 aa21.2■□□□□ 0.98
PXN-208ENST00000538144 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
PXN-208ENST00000538144 C11orf95C9JLR9 678 aaPredicted RBP21.18■□□□□ 0.98
PXN-208ENST00000538144 DDX10Q13206 875 aaKnown RBP21.18■□□□□ 0.98
PXN-208ENST00000538144 SENP3Q9H4L4 574 aaPredicted RBP21.18■□□□□ 0.98
PXN-208ENST00000538144 ZFYVE9O95405 1425 aa21.17■□□□□ 0.98
PXN-208ENST00000538144 UBR1Q8IWV7 1749 aa21.17■□□□□ 0.98
PXN-208ENST00000538144 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
PXN-208ENST00000538144 C14orf93Q9H972 538 aaKnown RBP21.16■□□□□ 0.98
PXN-208ENST00000538144 NLRP1Q9C000 1473 aa21.15■□□□□ 0.98
PXN-208ENST00000538144 RIMS2Q9UQ26 1411 aa21.15■□□□□ 0.98
PXN-208ENST00000538144 KDM5AP29375 1690 aaKnown RBP21.15■□□□□ 0.98
PXN-208ENST00000538144 IQGAP1P46940 1657 aa21.15■□□□□ 0.98
PXN-208ENST00000538144 POLR1AO95602 1720 aaPredicted RBP21.14■□□□□ 0.97
PXN-208ENST00000538144 SCAF11Q99590 1463 aaKnown RBP21.12■□□□□ 0.97
PXN-208ENST00000538144 SETBP1Q9Y6X0 1596 aa21.11■□□□□ 0.97
PXN-208ENST00000538144 CCDC7Q96M83 1385 aa21.11■□□□□ 0.97
PXN-208ENST00000538144 TMEM132EQ6IEE7 984 aa21.11■□□□□ 0.97
PXN-208ENST00000538144 MIER1Q8N108 512 aa21.1■□□□□ 0.97
PXN-208ENST00000538144 MYO3AQ8NEV4 1616 aa21.1■□□□□ 0.97
PXN-208ENST00000538144 KIF7Q2M1P5 1343 aa21.1■□□□□ 0.97
PXN-208ENST00000538144 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.08■□□□□ 0.97
PXN-208ENST00000538144 TMEM2Q9UHN6 1383 aa21.08■□□□□ 0.97
PXN-208ENST00000538144 ADGRB1O14514 1584 aa21.08■□□□□ 0.96
PXN-208ENST00000538144 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
PXN-208ENST00000538144 POLR3GLQ9BT43 218 aa21.06■□□□□ 0.96
PXN-208ENST00000538144 TESK2Q96S53 571 aa21.06■□□□□ 0.96
PXN-208ENST00000538144 EIF3AQ14152 1382 aaKnown RBP21.05■□□□□ 0.96
PXN-208ENST00000538144 SETD1BQ9UPS6 1966 aaKnown RBP21.04■□□□□ 0.96
PXN-208ENST00000538144 ALKQ9UM73 1620 aa21.04■□□□□ 0.96
PXN-208ENST00000538144 TRAK1Q9UPV9 953 aa21.04■□□□□ 0.96
PXN-208ENST00000538144 PTPRMP28827 1452 aa21.03■□□□□ 0.96
PXN-208ENST00000538144 THEMISQ8N1K5 641 aaPredicted RBP21.03■□□□□ 0.96
PXN-208ENST00000538144 CEP170BQ9Y4F5 1589 aaPredicted RBP21.03■□□□□ 0.96
PXN-208ENST00000538144 ASXL1Q8IXJ9 1541 aa21.02■□□□□ 0.95
PXN-208ENST00000538144 LTKP29376 864 aa21.01■□□□□ 0.95
PXN-208ENST00000538144 TXNDC2Q86VQ3 553 aa21.01■□□□□ 0.95
PXN-208ENST00000538144 BCANQ96GW7 911 aa21■□□□□ 0.95
PXN-208ENST00000538144 NRXN3Q9Y4C0 1643 aa21■□□□□ 0.95
PXN-208ENST00000538144 DISP3Q9P2K9 1392 aa20.99■□□□□ 0.95
PXN-208ENST00000538144 TMF1P82094 1093 aa20.99■□□□□ 0.95
PXN-208ENST00000538144 STK26Q9P289 416 aa20.99■□□□□ 0.95
PXN-208ENST00000538144 EID1Q9Y6B2 187 aa20.99■□□□□ 0.95
PXN-208ENST00000538144 SLIT1O75093 1534 aa20.99■□□□□ 0.95
PXN-208ENST00000538144 SETD1AO15047 1707 aaKnown RBP20.98■□□□□ 0.95
PXN-208ENST00000538144 CENPBP07199 599 aaPredicted RBP20.98■□□□□ 0.95
PXN-208ENST00000538144 ARHGAP23Q9P227 1491 aa20.98■□□□□ 0.95
PXN-208ENST00000538144 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
PXN-208ENST00000538144 ARHGEF28Q8N1W1 1705 aaKnown RBP20.97■□□□□ 0.95
PXN-208ENST00000538144 ZNF142P52746 1687 aaPredicted RBP20.96■□□□□ 0.95
PXN-208ENST00000538144 CENPJQ9HC77 1338 aaPredicted RBP20.96■□□□□ 0.95
PXN-208ENST00000538144 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.94
PXN-208ENST00000538144 PLEKHG1Q9ULL1 1385 aa20.94■□□□□ 0.94
PXN-208ENST00000538144 QRICH2Q9H0J4 1663 aa20.94■□□□□ 0.94
PXN-208ENST00000538144 METP08581 1390 aa20.91■□□□□ 0.94
PXN-208ENST00000538144 ADAMTS13Q76LX8 1427 aa20.9■□□□□ 0.94
PXN-208ENST00000538144 KDM4FA0A1W2PPD8 638 aa20.9■□□□□ 0.94
PXN-208ENST00000538144 SLC24A1O60721 1099 aa20.9■□□□□ 0.94
PXN-208ENST00000538144 SAFB2Q14151 953 aaKnown RBP eCLIP20.89■□□□□ 0.93
PXN-208ENST00000538144 SBNO2Q9Y2G9 1366 aa20.89■□□□□ 0.93
PXN-208ENST00000538144 SLC26A8Q96RN1 970 aa20.88■□□□□ 0.93
PXN-208ENST00000538144 LRPPRCP42704 1394 aaKnown RBP20.88■□□□□ 0.93
PXN-208ENST00000538144 ANP32CO43423 234 aa20.88■□□□□ 0.93
PXN-208ENST00000538144 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
PXN-208ENST00000538144 PRAM1Q96QH2 718 aa20.87■□□□□ 0.93
PXN-208ENST00000538144 POGKQ9P215 609 aa20.87■□□□□ 0.93
PXN-208ENST00000538144 ANKLE2Q86XL3 938 aa20.86■□□□□ 0.93
PXN-208ENST00000538144 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
PXN-208ENST00000538144 MED14O60244 1454 aa20.85■□□□□ 0.93
PXN-208ENST00000538144 DLC1Q96QB1 1528 aa20.83■□□□□ 0.92
PXN-208ENST00000538144 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
PXN-208ENST00000538144 TBX22Q9Y458 520 aa20.82■□□□□ 0.92
PXN-208ENST00000538144 KNDC1Q76NI1 1749 aa20.81■□□□□ 0.92
PXN-208ENST00000538144 MINK1Q8N4C8 1332 aaPredicted RBP20.81■□□□□ 0.92
PXN-208ENST00000538144 PLEKHH1Q9ULM0 1364 aa20.8■□□□□ 0.92
PXN-208ENST00000538144 EVC2Q86UK5 1308 aa20.79■□□□□ 0.92
PXN-208ENST00000538144 PANK3Q9H999 370 aa20.79■□□□□ 0.92
PXN-208ENST00000538144 TULP4Q9NRJ4 1543 aa20.79■□□□□ 0.92
PXN-208ENST00000538144 MYOM1P52179 1685 aa20.79■□□□□ 0.92
PXN-208ENST00000538144 DIP2AQ14689 1571 aa20.78■□□□□ 0.92
PXN-208ENST00000538144 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
PXN-208ENST00000538144 TECPR2O15040 1411 aa20.77■□□□□ 0.92
PXN-208ENST00000538144 PTPRUQ92729 1446 aa20.77■□□□□ 0.92
PXN-208ENST00000538144 CPS1P31327 1500 aa20.76■□□□□ 0.91
PXN-208ENST00000538144 SIRT1Q96EB6 747 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms