RNA–Protein interactions for RNA: ENST00000537694.1

PPP1CA-209, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 882 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-209ENST00000537694 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
PPP1CA-209ENST00000537694 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
PPP1CA-209ENST00000537694 NUTM2DQ5VT03 806 aaPredicted RBP23.47■■□□□ 1.35
PPP1CA-209ENST00000537694 KDM5AP29375 1690 aaKnown RBP23.47■■□□□ 1.35
PPP1CA-209ENST00000537694 MSH6P52701 1360 aa23.46■■□□□ 1.35
PPP1CA-209ENST00000537694 ADGRB3O60242 1522 aa23.45■■□□□ 1.34
PPP1CA-209ENST00000537694 ITGAEP38570 1179 aa23.45■■□□□ 1.34
PPP1CA-209ENST00000537694 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.45■■□□□ 1.34
PPP1CA-209ENST00000537694 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
PPP1CA-209ENST00000537694 C14orf37Q86TY3 774 aa23.44■■□□□ 1.34
PPP1CA-209ENST00000537694 TBX22Q9Y458 520 aa23.44■■□□□ 1.34
PPP1CA-209ENST00000537694 RIMS2Q9UQ26 1411 aa23.43■■□□□ 1.34
PPP1CA-209ENST00000537694 PLEKHG1Q9ULL1 1385 aa23.42■■□□□ 1.34
PPP1CA-209ENST00000537694 POTEAQ6S8J7 498 aa23.4■■□□□ 1.34
PPP1CA-209ENST00000537694 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
PPP1CA-209ENST00000537694 ZFYVE9O95405 1425 aa23.39■■□□□ 1.33
PPP1CA-209ENST00000537694 NKTRP30414 1462 aaKnown RBP23.38■■□□□ 1.33
PPP1CA-209ENST00000537694 ROBO1Q9Y6N7 1651 aa23.36■■□□□ 1.33
PPP1CA-209ENST00000537694 NUP155O75694 1391 aa23.36■■□□□ 1.33
PPP1CA-209ENST00000537694 ROCK1Q13464 1354 aa23.33■■□□□ 1.33
PPP1CA-209ENST00000537694 ATF3P18847 181 aa23.33■■□□□ 1.33
PPP1CA-209ENST00000537694 C19orf44Q9H6X5 657 aa23.33■■□□□ 1.33
PPP1CA-209ENST00000537694 TMEM131LA2VDJ0 1609 aa23.32■■□□□ 1.32
PPP1CA-209ENST00000537694 NWD1Q149M9 1564 aa23.31■■□□□ 1.32
PPP1CA-209ENST00000537694 MYO5BQ9ULV0 1848 aa23.31■■□□□ 1.32
PPP1CA-209ENST00000537694 CADPS2Q86UW7 1296 aa23.31■■□□□ 1.32
PPP1CA-209ENST00000537694 AMOTL2Q9Y2J4 779 aa23.31■■□□□ 1.32
PPP1CA-209ENST00000537694 JCADQ9P266 1359 aa23.29■■□□□ 1.32
PPP1CA-209ENST00000537694 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
PPP1CA-209ENST00000537694 CHD2O14647 1828 aaKnown RBP23.29■■□□□ 1.32
PPP1CA-209ENST00000537694 ZNF326Q5BKZ1 582 aaKnown RBP23.28■■□□□ 1.32
PPP1CA-209ENST00000537694 ADAMTS13Q76LX8 1427 aa23.27■■□□□ 1.32
PPP1CA-209ENST00000537694 NCOA3Q9Y6Q9 1424 aa23.27■■□□□ 1.32
PPP1CA-209ENST00000537694 UNC13BO14795 1591 aa23.26■■□□□ 1.31
PPP1CA-209ENST00000537694 MEX3CQ5U5Q3 659 aaKnown RBP23.25■■□□□ 1.31
PPP1CA-209ENST00000537694 E9PCH4 1651 aa23.25■■□□□ 1.31
PPP1CA-209ENST00000537694 PIK3R4Q99570 1358 aa23.25■■□□□ 1.31
PPP1CA-209ENST00000537694 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
PPP1CA-209ENST00000537694 SPATA31A6Q5VVP1 1343 aa23.19■■□□□ 1.3
PPP1CA-209ENST00000537694 IQGAP3Q86VI3 1631 aa23.19■■□□□ 1.3
PPP1CA-209ENST00000537694 BRINP3Q76B58 766 aa23.18■■□□□ 1.3
PPP1CA-209ENST00000537694 PTPRUQ92729 1446 aa23.17■■□□□ 1.3
PPP1CA-209ENST00000537694 NUTM2BA6NNL0 878 aaPredicted RBP23.17■■□□□ 1.3
PPP1CA-209ENST00000537694 NUTM2EB1AL46 878 aaPredicted RBP23.17■■□□□ 1.3
PPP1CA-209ENST00000537694 NUTM2AQ8IVF1 878 aaPredicted RBP23.17■■□□□ 1.3
PPP1CA-209ENST00000537694 ZNF772Q68DY9 489 aaPredicted RBP23.15■■□□□ 1.3
PPP1CA-209ENST00000537694 TRPM2O94759 1503 aa23.14■■□□□ 1.3
PPP1CA-209ENST00000537694 DIP2AQ14689 1571 aa23.14■■□□□ 1.29
PPP1CA-209ENST00000537694 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
PPP1CA-209ENST00000537694 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
PPP1CA-209ENST00000537694 METP08581 1390 aa23.12■■□□□ 1.29
PPP1CA-209ENST00000537694 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
PPP1CA-209ENST00000537694 LRRC59Q96AG4 307 aaKnown RBP23.08■■□□□ 1.29
PPP1CA-209ENST00000537694 LRP6O75581 1613 aa23.08■■□□□ 1.28
PPP1CA-209ENST00000537694 RXRBP28702 533 aa23.07■■□□□ 1.28
PPP1CA-209ENST00000537694 DDX17Q92841 729 aaKnown RBP23.06■■□□□ 1.28
PPP1CA-209ENST00000537694 AHDC1Q5TGY3 1603 aaPredicted RBP23.04■■□□□ 1.28
PPP1CA-209ENST00000537694 VGFO15240 615 aaPredicted RBP23.04■■□□□ 1.28
PPP1CA-209ENST00000537694 DCCP43146 1447 aa23.03■■□□□ 1.28
PPP1CA-209ENST00000537694 SETBP1Q9Y6X0 1596 aa23.02■■□□□ 1.28
PPP1CA-209ENST00000537694 MST1RQ04912 1400 aa23.01■■□□□ 1.27
PPP1CA-209ENST00000537694 UPF1Q92900 1129 aaKnown RBP eCLIP23.01■■□□□ 1.27
PPP1CA-209ENST00000537694 SPHKAPQ2M3C7 1700 aa23.01■■□□□ 1.27
PPP1CA-209ENST00000537694 AFF2P51816 1311 aa23■■□□□ 1.27
PPP1CA-209ENST00000537694 NRXN3Q9Y4C0 1643 aa23■■□□□ 1.27
PPP1CA-209ENST00000537694 C8orf37Q96NL8 207 aa22.99■■□□□ 1.27
PPP1CA-209ENST00000537694 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
PPP1CA-209ENST00000537694 NAIPQ13075 1403 aa22.99■■□□□ 1.27
PPP1CA-209ENST00000537694 ASXL1Q8IXJ9 1541 aa22.98■■□□□ 1.27
PPP1CA-209ENST00000537694 SETD5Q9C0A6 1442 aa22.98■■□□□ 1.27
PPP1CA-209ENST00000537694 SETD1AO15047 1707 aaKnown RBP22.97■■□□□ 1.27
PPP1CA-209ENST00000537694 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
PPP1CA-209ENST00000537694 QTRT2Q9H974 415 aaKnown RBP22.96■■□□□ 1.27
PPP1CA-209ENST00000537694 ADGRL3Q9HAR2 1447 aa22.96■■□□□ 1.27
PPP1CA-209ENST00000537694 XRN1Q8IZH2 1706 aaKnown RBP22.96■■□□□ 1.27
PPP1CA-209ENST00000537694 ADAMTS2O95450 1211 aa22.95■■□□□ 1.26
PPP1CA-209ENST00000537694 CLTCL1P53675 1640 aa22.94■■□□□ 1.26
PPP1CA-209ENST00000537694 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
PPP1CA-209ENST00000537694 RPGRIP1LQ68CZ1 1315 aa22.94■■□□□ 1.26
PPP1CA-209ENST00000537694 NGLY1Q96IV0 654 aa22.94■■□□□ 1.26
PPP1CA-209ENST00000537694 ORAI2Q96SN7 254 aa22.94■■□□□ 1.26
PPP1CA-209ENST00000537694 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
PPP1CA-209ENST00000537694 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
PPP1CA-209ENST00000537694 ROBO2Q9HCK4 1378 aa22.9■■□□□ 1.26
PPP1CA-209ENST00000537694 RBM6P78332 1123 aaKnown RBP22.9■■□□□ 1.26
PPP1CA-209ENST00000537694 FOXD1Q16676 465 aa22.9■■□□□ 1.26
PPP1CA-209ENST00000537694 C1orf167Q5SNV9 1468 aa22.9■■□□□ 1.26
PPP1CA-209ENST00000537694 KIF1BO60333 1816 aa22.89■■□□□ 1.25
PPP1CA-209ENST00000537694 RGL3Q3MIN7 710 aa22.88■■□□□ 1.25
PPP1CA-209ENST00000537694 SOS2Q07890 1332 aaPredicted RBP22.85■■□□□ 1.25
PPP1CA-209ENST00000537694 ESCO1Q5FWF5 840 aa22.85■■□□□ 1.25
PPP1CA-209ENST00000537694 STK26Q9P289 416 aa22.85■■□□□ 1.25
PPP1CA-209ENST00000537694 NHSL1Q5SYE7 1610 aa22.85■■□□□ 1.25
PPP1CA-209ENST00000537694 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
PPP1CA-209ENST00000537694 USP21Q9UK80 565 aa22.83■■□□□ 1.25
PPP1CA-209ENST00000537694 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
PPP1CA-209ENST00000537694 CDK12Q9NYV4 1490 aaPredicted RBP22.82■■□□□ 1.24
PPP1CA-209ENST00000537694 NALCNQ8IZF0 1738 aa22.82■■□□□ 1.24
PPP1CA-209ENST00000537694 ADGRF5Q8IZF2 1346 aa22.81■■□□□ 1.24
PPP1CA-209ENST00000537694 NUTM2FA1L443 756 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms