RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CEP170BQ9Y4F5 1589 aaPredicted RBP22.41■■□□□ 1.18
SFSWAP-206ENST00000537582 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
SFSWAP-206ENST00000537582 MYOM2P54296 1465 aa22.39■■□□□ 1.18
SFSWAP-206ENST00000537582 RPGRIP1LQ68CZ1 1315 aa22.38■■□□□ 1.17
SFSWAP-206ENST00000537582 KDM5AP29375 1690 aaKnown RBP22.37■■□□□ 1.17
SFSWAP-206ENST00000537582 RIMS2Q9UQ26 1411 aa22.37■■□□□ 1.17
SFSWAP-206ENST00000537582 ZFYVE9O95405 1425 aa22.37■■□□□ 1.17
SFSWAP-206ENST00000537582 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
SFSWAP-206ENST00000537582 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
SFSWAP-206ENST00000537582 TMEM2Q9UHN6 1383 aa22.35■■□□□ 1.17
SFSWAP-206ENST00000537582 TRPM1Q7Z4N2 1603 aa22.33■■□□□ 1.16
SFSWAP-206ENST00000537582 RALGAPBQ86X10 1494 aa22.32■■□□□ 1.16
SFSWAP-206ENST00000537582 NBPF1Q3BBV0 1214 aa22.32■■□□□ 1.16
SFSWAP-206ENST00000537582 PIK3C2GO75747 1445 aa22.32■■□□□ 1.16
SFSWAP-206ENST00000537582 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
SFSWAP-206ENST00000537582 LTKP29376 864 aa22.3■■□□□ 1.16
SFSWAP-206ENST00000537582 SETD1BQ9UPS6 1966 aaKnown RBP22.3■■□□□ 1.16
SFSWAP-206ENST00000537582 SLIT1O75093 1534 aa22.29■■□□□ 1.16
SFSWAP-206ENST00000537582 CFAP70Q5T0N1 1121 aa22.29■■□□□ 1.16
SFSWAP-206ENST00000537582 THEMISQ8N1K5 641 aaPredicted RBP22.29■■□□□ 1.16
SFSWAP-206ENST00000537582 STAC3Q96MF2 364 aa22.29■■□□□ 1.16
SFSWAP-206ENST00000537582 ARHGAP23Q9P227 1491 aa22.29■■□□□ 1.16
SFSWAP-206ENST00000537582 ROCK2O75116 1388 aaKnown RBP22.26■■□□□ 1.15
SFSWAP-206ENST00000537582 TXNDC2Q86VQ3 553 aa22.25■■□□□ 1.15
SFSWAP-206ENST00000537582 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.25■■□□□ 1.15
SFSWAP-206ENST00000537582 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
SFSWAP-206ENST00000537582 NRXN3Q9Y4C0 1643 aa22.22■■□□□ 1.15
SFSWAP-206ENST00000537582 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
SFSWAP-206ENST00000537582 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
SFSWAP-206ENST00000537582 GPRASP1Q5JY77 1395 aa22.21■■□□□ 1.15
SFSWAP-206ENST00000537582 KIAA1210Q9ULL0 1709 aa22.21■■□□□ 1.15
SFSWAP-206ENST00000537582 SCAF11Q99590 1463 aaKnown RBP22.21■■□□□ 1.15
SFSWAP-206ENST00000537582 IQGAP1P46940 1657 aa22.21■■□□□ 1.15
SFSWAP-206ENST00000537582 EID1Q9Y6B2 187 aa22.21■■□□□ 1.15
SFSWAP-206ENST00000537582 LMTK3Q96Q04 1460 aa22.2■■□□□ 1.14
SFSWAP-206ENST00000537582 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.14
SFSWAP-206ENST00000537582 ALKQ9UM73 1620 aa22.2■■□□□ 1.14
SFSWAP-206ENST00000537582 HSPA2P54652 639 aa22.2■■□□□ 1.14
SFSWAP-206ENST00000537582 TMEM132EQ6IEE7 984 aa22.2■■□□□ 1.14
SFSWAP-206ENST00000537582 HDGFP51858 240 aaKnown RBP22.19■■□□□ 1.14
SFSWAP-206ENST00000537582 ADGRB1O14514 1584 aa22.18■■□□□ 1.14
SFSWAP-206ENST00000537582 SETBP1Q9Y6X0 1596 aa22.18■■□□□ 1.14
SFSWAP-206ENST00000537582 PLEKHG1Q9ULL1 1385 aa22.18■■□□□ 1.14
SFSWAP-206ENST00000537582 HSPA5P11021 654 aaKnown RBP22.17■■□□□ 1.14
SFSWAP-206ENST00000537582 BCANQ96GW7 911 aa22.17■■□□□ 1.14
SFSWAP-206ENST00000537582 USP47Q96K76 1375 aa22.17■■□□□ 1.14
SFSWAP-206ENST00000537582 ADAMTS13Q76LX8 1427 aa22.16■■□□□ 1.14
SFSWAP-206ENST00000537582 SETD1AO15047 1707 aaKnown RBP22.16■■□□□ 1.14
SFSWAP-206ENST00000537582 LAMC1P11047 1609 aa22.15■■□□□ 1.14
SFSWAP-206ENST00000537582 NCKAP5LQ9HCH0 1330 aa22.15■■□□□ 1.14
SFSWAP-206ENST00000537582 ANKLE2Q86XL3 938 aa22.15■■□□□ 1.14
SFSWAP-206ENST00000537582 SLC26A8Q96RN1 970 aa22.14■■□□□ 1.13
SFSWAP-206ENST00000537582 EIF4G2P78344 907 aaKnown RBP eCLIP22.13■■□□□ 1.13
SFSWAP-206ENST00000537582 METP08581 1390 aa22.13■■□□□ 1.13
SFSWAP-206ENST00000537582 MED14O60244 1454 aa22.11■■□□□ 1.13
SFSWAP-206ENST00000537582 POLR1AO95602 1720 aaPredicted RBP22.1■■□□□ 1.13
SFSWAP-206ENST00000537582 STK26Q9P289 416 aa22.09■■□□□ 1.13
SFSWAP-206ENST00000537582 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
SFSWAP-206ENST00000537582 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
SFSWAP-206ENST00000537582 NPHP4O75161 1426 aaPredicted RBP22.08■■□□□ 1.12
SFSWAP-206ENST00000537582 ST20-MTHFSA0A0A6YYL1 179 aa22.08■■□□□ 1.12
SFSWAP-206ENST00000537582 YTHDC2Q9H6S0 1430 aaKnown RBP22.06■■□□□ 1.12
SFSWAP-206ENST00000537582 PTPRUQ92729 1446 aa22.04■■□□□ 1.12
SFSWAP-206ENST00000537582 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
SFSWAP-206ENST00000537582 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
SFSWAP-206ENST00000537582 LRPPRCP42704 1394 aaKnown RBP22.02■■□□□ 1.12
SFSWAP-206ENST00000537582 C11orf95C9JLR9 678 aaPredicted RBP22.02■■□□□ 1.12
SFSWAP-206ENST00000537582 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
SFSWAP-206ENST00000537582 STRCQ7RTU9 1775 aa22.01■■□□□ 1.11
SFSWAP-206ENST00000537582 TESK2Q96S53 571 aa21.99■■□□□ 1.11
SFSWAP-206ENST00000537582 EIF3AQ14152 1382 aaKnown RBP21.98■■□□□ 1.11
SFSWAP-206ENST00000537582 ABCC11Q96J66 1382 aa21.97■■□□□ 1.11
SFSWAP-206ENST00000537582 PLEKHH1Q9ULM0 1364 aa21.97■■□□□ 1.11
SFSWAP-206ENST00000537582 SAFB2Q14151 953 aaKnown RBP eCLIP21.97■■□□□ 1.11
SFSWAP-206ENST00000537582 PRAM1Q96QH2 718 aa21.96■■□□□ 1.11
SFSWAP-206ENST00000537582 CENPJQ9HC77 1338 aaPredicted RBP21.96■■□□□ 1.11
SFSWAP-206ENST00000537582 WAPLQ7Z5K2 1190 aa21.95■■□□□ 1.11
SFSWAP-206ENST00000537582 ROBO2Q9HCK4 1378 aa21.95■■□□□ 1.1
SFSWAP-206ENST00000537582 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
SFSWAP-206ENST00000537582 QRICH2Q9H0J4 1663 aa21.94■■□□□ 1.1
SFSWAP-206ENST00000537582 DLC1Q96QB1 1528 aa21.94■■□□□ 1.1
SFSWAP-206ENST00000537582 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
SFSWAP-206ENST00000537582 TECPR2O15040 1411 aa21.94■■□□□ 1.1
SFSWAP-206ENST00000537582 CPS1P31327 1500 aa21.94■■□□□ 1.1
SFSWAP-206ENST00000537582 DISP3Q9P2K9 1392 aa21.93■■□□□ 1.1
SFSWAP-206ENST00000537582 XRN1Q8IZH2 1706 aaKnown RBP21.93■■□□□ 1.1
SFSWAP-206ENST00000537582 WASHC2AQ641Q2 1341 aa21.93■■□□□ 1.1
SFSWAP-206ENST00000537582 KCNA6P17658 529 aa21.91■■□□□ 1.1
SFSWAP-206ENST00000537582 POGKQ9P215 609 aa21.91■■□□□ 1.1
SFSWAP-206ENST00000537582 PIK3R4Q99570 1358 aa21.91■■□□□ 1.1
SFSWAP-206ENST00000537582 KIF7Q2M1P5 1343 aa21.9■■□□□ 1.1
SFSWAP-206ENST00000537582 MINK1Q8N4C8 1332 aaPredicted RBP21.89■■□□□ 1.09
SFSWAP-206ENST00000537582 CCDC7Q96M83 1385 aa21.89■■□□□ 1.09
SFSWAP-206ENST00000537582 CHD2O14647 1828 aaKnown RBP21.89■■□□□ 1.09
SFSWAP-206ENST00000537582 FAM135BQ49AJ0 1406 aa21.87■■□□□ 1.09
SFSWAP-206ENST00000537582 POLR3GLQ9BT43 218 aa21.87■■□□□ 1.09
SFSWAP-206ENST00000537582 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
SFSWAP-206ENST00000537582 SBNO2Q9Y2G9 1366 aa21.86■■□□□ 1.09
SFSWAP-206ENST00000537582 RBM33Q96EV2 1170 aaKnown RBP21.86■■□□□ 1.09
SFSWAP-206ENST00000537582 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms