RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 IFT172Q9UG01 1749 aa34.98■■■■□ 3.19
HMGA2-208ENST00000537429 ARHGAP23Q9P227 1491 aa34.98■■■■□ 3.19
HMGA2-208ENST00000537429 ZFYVE9O95405 1425 aa34.97■■■■□ 3.19
HMGA2-208ENST00000537429 PPLO60437 1756 aa34.96■■■■□ 3.19
HMGA2-208ENST00000537429 DCAF11Q8TEB1 546 aa34.96■■■■□ 3.19
HMGA2-208ENST00000537429 RIMS2Q9UQ26 1411 aa34.96■■■■□ 3.19
HMGA2-208ENST00000537429 STAC3Q96MF2 364 aa34.92■■■■□ 3.18
HMGA2-208ENST00000537429 HDGFP51858 240 aaKnown RBP34.91■■■■□ 3.18
HMGA2-208ENST00000537429 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.9■■■■□ 3.18
HMGA2-208ENST00000537429 KDM2AQ9Y2K7 1162 aa34.9■■■■□ 3.18
HMGA2-208ENST00000537429 VGFO15240 615 aaPredicted RBP34.89■■■■□ 3.18
HMGA2-208ENST00000537429 MYOM2P54296 1465 aa34.88■■■■□ 3.18
HMGA2-208ENST00000537429 HSPA2P54652 639 aa34.88■■■■□ 3.17
HMGA2-208ENST00000537429 NUTM2DQ5VT03 806 aaPredicted RBP34.88■■■■□ 3.17
HMGA2-208ENST00000537429 LTKP29376 864 aa34.87■■■■□ 3.17
HMGA2-208ENST00000537429 TXNDC2Q86VQ3 553 aa34.86■■■■□ 3.17
HMGA2-208ENST00000537429 EID1Q9Y6B2 187 aa34.86■■■■□ 3.17
HMGA2-208ENST00000537429 ADGRF5Q8IZF2 1346 aa34.84■■■■□ 3.17
HMGA2-208ENST00000537429 PPP1R15AO75807 674 aaPredicted RBP34.84■■■■□ 3.17
HMGA2-208ENST00000537429 ANKLE2Q86XL3 938 aa34.83■■■■□ 3.17
HMGA2-208ENST00000537429 SCAF11Q99590 1463 aaKnown RBP34.83■■■■□ 3.17
HMGA2-208ENST00000537429 NRXN1Q9ULB1 1477 aa34.83■■■■□ 3.17
HMGA2-208ENST00000537429 ZEB1P37275 1124 aaPredicted RBP34.8■■■■□ 3.16
HMGA2-208ENST00000537429 PRAG1Q86YV5 1406 aa34.78■■■■□ 3.16
HMGA2-208ENST00000537429 PIK3C2GO75747 1445 aa34.76■■■■□ 3.16
HMGA2-208ENST00000537429 POLR1AO95602 1720 aaPredicted RBP34.76■■■■□ 3.16
HMGA2-208ENST00000537429 PLEKHG1Q9ULL1 1385 aa34.75■■■■□ 3.15
HMGA2-208ENST00000537429 SENP3Q9H4L4 574 aaPredicted RBP34.75■■■■□ 3.15
HMGA2-208ENST00000537429 NBPF8Q3BBV2 869 aa34.74■■■■□ 3.15
HMGA2-208ENST00000537429 NCKAP5LQ9HCH0 1330 aa34.73■■■■□ 3.15
HMGA2-208ENST00000537429 MED14O60244 1454 aa34.72■■■■□ 3.15
HMGA2-208ENST00000537429 BCANQ96GW7 911 aa34.71■■■■□ 3.15
HMGA2-208ENST00000537429 SETBP1Q9Y6X0 1596 aa34.7■■■■□ 3.15
HMGA2-208ENST00000537429 NRXN3Q9Y4C0 1643 aa34.69■■■■□ 3.14
HMGA2-208ENST00000537429 STRCQ7RTU9 1775 aa34.69■■■■□ 3.14
HMGA2-208ENST00000537429 NPHP4O75161 1426 aaPredicted RBP34.67■■■■□ 3.14
HMGA2-208ENST00000537429 IQGAP1P46940 1657 aa34.66■■■■□ 3.14
HMGA2-208ENST00000537429 C14orf93Q9H972 538 aaKnown RBP34.65■■■■□ 3.14
HMGA2-208ENST00000537429 CFAP70Q5T0N1 1121 aa34.64■■■■□ 3.14
HMGA2-208ENST00000537429 ALKQ9UM73 1620 aa34.64■■■■□ 3.14
HMGA2-208ENST00000537429 ADAMTS13Q76LX8 1427 aa34.64■■■■□ 3.14
HMGA2-208ENST00000537429 KIAA1210Q9ULL0 1709 aa34.63■■■■□ 3.13
HMGA2-208ENST00000537429 TRPM1Q7Z4N2 1603 aa34.63■■■■□ 3.13
HMGA2-208ENST00000537429 LAMC1P11047 1609 aa34.62■■■■□ 3.13
HMGA2-208ENST00000537429 SETD1AO15047 1707 aaKnown RBP34.59■■■■□ 3.13
HMGA2-208ENST00000537429 RALGAPBQ86X10 1494 aa34.58■■■■□ 3.13
HMGA2-208ENST00000537429 SLC26A8Q96RN1 970 aa34.58■■■■□ 3.13
HMGA2-208ENST00000537429 TBX22Q9Y458 520 aa34.57■■■■□ 3.12
HMGA2-208ENST00000537429 DIP2AQ14689 1571 aa34.56■■■■□ 3.12
HMGA2-208ENST00000537429 NBPF1Q3BBV0 1214 aa34.55■■■■□ 3.12
HMGA2-208ENST00000537429 ADGRB1O14514 1584 aa34.52■■■■□ 3.12
HMGA2-208ENST00000537429 ASXL1Q8IXJ9 1541 aa34.51■■■■□ 3.12
HMGA2-208ENST00000537429 ROCK2O75116 1388 aaKnown RBP34.51■■■■□ 3.11
HMGA2-208ENST00000537429 METP08581 1390 aa34.51■■■■□ 3.11
HMGA2-208ENST00000537429 GPRASP1Q5JY77 1395 aa34.5■■■■□ 3.11
HMGA2-208ENST00000537429 TMEM132EQ6IEE7 984 aa34.5■■■■□ 3.11
HMGA2-208ENST00000537429 DMRT2Q9Y5R5 561 aa34.48■■■■□ 3.11
HMGA2-208ENST00000537429 PIK3R4Q99570 1358 aa34.44■■■■□ 3.1
HMGA2-208ENST00000537429 CARD11Q9BXL7 1154 aa34.43■■■■□ 3.1
HMGA2-208ENST00000537429 YTHDC2Q9H6S0 1430 aaKnown RBP34.4■■■■□ 3.1
HMGA2-208ENST00000537429 PTPRUQ92729 1446 aa34.4■■■■□ 3.1
HMGA2-208ENST00000537429 LRPPRCP42704 1394 aaKnown RBP34.38■■■■□ 3.09
HMGA2-208ENST00000537429 CHD2O14647 1828 aaKnown RBP34.37■■■■□ 3.09
HMGA2-208ENST00000537429 ABCC11Q96J66 1382 aa34.35■■■■□ 3.09
HMGA2-208ENST00000537429 STK26Q9P289 416 aa34.35■■■■□ 3.09
HMGA2-208ENST00000537429 AMOTL2Q9Y2J4 779 aa34.34■■■■□ 3.09
HMGA2-208ENST00000537429 XRN1Q8IZH2 1706 aaKnown RBP34.32■■■■□ 3.08
HMGA2-208ENST00000537429 TRAK1Q9UPV9 953 aa34.32■■■■□ 3.08
HMGA2-208ENST00000537429 TECPR2O15040 1411 aa34.31■■■■□ 3.08
HMGA2-208ENST00000537429 KCNA6P17658 529 aa34.31■■■■□ 3.08
HMGA2-208ENST00000537429 KNDC1Q76NI1 1749 aa34.31■■■■□ 3.08
HMGA2-208ENST00000537429 NWD1Q149M9 1564 aa34.3■■■■□ 3.08
HMGA2-208ENST00000537429 DLC1Q96QB1 1528 aa34.28■■■■□ 3.08
HMGA2-208ENST00000537429 USP47Q96K76 1375 aa34.27■■■■□ 3.08
HMGA2-208ENST00000537429 CPS1P31327 1500 aa34.27■■■■□ 3.08
HMGA2-208ENST00000537429 ARHGEF28Q8N1W1 1705 aaKnown RBP34.26■■■■□ 3.07
HMGA2-208ENST00000537429 SIRT1Q96EB6 747 aa34.25■■■■□ 3.07
HMGA2-208ENST00000537429 STRCP1A6NGW2 1772 aa34.24■■■■□ 3.07
HMGA2-208ENST00000537429 PTCH1Q13635 1447 aa34.24■■■■□ 3.07
HMGA2-208ENST00000537429 EIF4G2P78344 907 aaKnown RBP eCLIP34.23■■■■□ 3.07
HMGA2-208ENST00000537429 ROBO2Q9HCK4 1378 aa34.23■■■■□ 3.07
HMGA2-208ENST00000537429 ZNF335Q9H4Z2 1342 aaPredicted RBP34.22■■■■□ 3.07
HMGA2-208ENST00000537429 EIF3AQ14152 1382 aaKnown RBP34.22■■■■□ 3.07
HMGA2-208ENST00000537429 FAM135BQ49AJ0 1406 aa34.22■■■■□ 3.07
HMGA2-208ENST00000537429 NKTRP30414 1462 aaKnown RBP34.2■■■■□ 3.07
HMGA2-208ENST00000537429 PRAM1Q96QH2 718 aa34.19■■■■□ 3.06
HMGA2-208ENST00000537429 ST20-MTHFSA0A0A6YYL1 179 aa34.17■■■■□ 3.06
HMGA2-208ENST00000537429 HSPA5P11021 654 aaKnown RBP34.17■■■■□ 3.06
HMGA2-208ENST00000537429 WAPLQ7Z5K2 1190 aa34.17■■■■□ 3.06
HMGA2-208ENST00000537429 CENPJQ9HC77 1338 aaPredicted RBP34.15■■■■□ 3.06
HMGA2-208ENST00000537429 PLEKHH1Q9ULM0 1364 aa34.15■■■■□ 3.06
HMGA2-208ENST00000537429 POGKQ9P215 609 aa34.14■■■■□ 3.06
HMGA2-208ENST00000537429 PROSER2Q86WR7 435 aaPredicted RBP34.1■■■■□ 3.05
HMGA2-208ENST00000537429 SAFB2Q14151 953 aaKnown RBP eCLIP34.09■■■■□ 3.05
HMGA2-208ENST00000537429 QRICH2Q9H0J4 1663 aa34.09■■■■□ 3.05
HMGA2-208ENST00000537429 HIRIP3Q9BW71 556 aaPredicted RBP34.09■■■■□ 3.05
HMGA2-208ENST00000537429 SBNO2Q9Y2G9 1366 aa34.07■■■■□ 3.05
HMGA2-208ENST00000537429 TESK2Q96S53 571 aa34.07■■■■□ 3.04
HMGA2-208ENST00000537429 LTBP4Q8N2S1 1624 aa34.07■■■■□ 3.04
HMGA2-208ENST00000537429 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms