RNA–Protein interactions for RNA: ENST00000536943.1

OTUB1-208, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 3

Gene OTUB1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-208ENST00000536943 LRRC7Q96NW7 1537 aa24.43■■□□□ 1.5
OTUB1-208ENST00000536943 TMEM131LA2VDJ0 1609 aa24.43■■□□□ 1.5
OTUB1-208ENST00000536943 STRCP1A6NGW2 1772 aa24.42■■□□□ 1.5
OTUB1-208ENST00000536943 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
OTUB1-208ENST00000536943 MYO5BQ9ULV0 1848 aa24.41■■□□□ 1.5
OTUB1-208ENST00000536943 HFM1A2PYH4 1435 aa24.4■■□□□ 1.5
OTUB1-208ENST00000536943 KCNA6P17658 529 aa24.39■■□□□ 1.49
OTUB1-208ENST00000536943 PLEKHG1Q9ULL1 1385 aa24.39■■□□□ 1.49
OTUB1-208ENST00000536943 ZFYVE9O95405 1425 aa24.38■■□□□ 1.49
OTUB1-208ENST00000536943 SPHKAPQ2M3C7 1700 aa24.36■■□□□ 1.49
OTUB1-208ENST00000536943 PROSER2Q86WR7 435 aaPredicted RBP24.36■■□□□ 1.49
OTUB1-208ENST00000536943 ZNF326Q5BKZ1 582 aaKnown RBP24.35■■□□□ 1.49
OTUB1-208ENST00000536943 NUTM2DQ5VT03 806 aaPredicted RBP24.35■■□□□ 1.49
OTUB1-208ENST00000536943 DISP3Q9P2K9 1392 aa24.33■■□□□ 1.49
OTUB1-208ENST00000536943 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.49
OTUB1-208ENST00000536943 HSPA1LP34931 641 aa24.31■■□□□ 1.48
OTUB1-208ENST00000536943 TBX22Q9Y458 520 aa24.3■■□□□ 1.48
OTUB1-208ENST00000536943 TMEM94Q12767 1356 aa24.29■■□□□ 1.48
OTUB1-208ENST00000536943 NKTRP30414 1462 aaKnown RBP24.28■■□□□ 1.48
OTUB1-208ENST00000536943 TRPM2O94759 1503 aa24.25■■□□□ 1.47
OTUB1-208ENST00000536943 RBM33Q96EV2 1170 aaKnown RBP24.25■■□□□ 1.47
OTUB1-208ENST00000536943 NWD1Q149M9 1564 aa24.25■■□□□ 1.47
OTUB1-208ENST00000536943 DIP2AQ14689 1571 aa24.24■■□□□ 1.47
OTUB1-208ENST00000536943 XIRP1Q702N8 1843 aaKnown RBP24.23■■□□□ 1.47
OTUB1-208ENST00000536943 CLTCL1P53675 1640 aa24.22■■□□□ 1.47
OTUB1-208ENST00000536943 ALKQ9UM73 1620 aa24.22■■□□□ 1.47
OTUB1-208ENST00000536943 MSH6P52701 1360 aa24.22■■□□□ 1.47
OTUB1-208ENST00000536943 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
OTUB1-208ENST00000536943 C14orf37Q86TY3 774 aa24.22■■□□□ 1.47
OTUB1-208ENST00000536943 PIK3R4Q99570 1358 aa24.21■■□□□ 1.47
OTUB1-208ENST00000536943 CHD2O14647 1828 aaKnown RBP24.21■■□□□ 1.47
OTUB1-208ENST00000536943 KIF1BO60333 1816 aa24.21■■□□□ 1.47
OTUB1-208ENST00000536943 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
OTUB1-208ENST00000536943 AMOTL2Q9Y2J4 779 aa24.16■■□□□ 1.46
OTUB1-208ENST00000536943 VGFO15240 615 aaPredicted RBP24.15■■□□□ 1.46
OTUB1-208ENST00000536943 FOXD1Q16676 465 aa24.14■■□□□ 1.45
OTUB1-208ENST00000536943 MPHOSPH9Q99550 1183 aa24.14■■□□□ 1.45
OTUB1-208ENST00000536943 SETD5Q9C0A6 1442 aa24.13■■□□□ 1.45
OTUB1-208ENST00000536943 NCOA3Q9Y6Q9 1424 aa24.13■■□□□ 1.45
OTUB1-208ENST00000536943 SETBP1Q9Y6X0 1596 aa24.12■■□□□ 1.45
OTUB1-208ENST00000536943 FAM135BQ49AJ0 1406 aa24.12■■□□□ 1.45
OTUB1-208ENST00000536943 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
OTUB1-208ENST00000536943 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
OTUB1-208ENST00000536943 SLAIN2Q9P270 581 aa24.1■■□□□ 1.45
OTUB1-208ENST00000536943 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
OTUB1-208ENST00000536943 ATF3P18847 181 aa24.09■■□□□ 1.45
OTUB1-208ENST00000536943 C19orf44Q9H6X5 657 aa24.08■■□□□ 1.45
OTUB1-208ENST00000536943 CADPS2Q86UW7 1296 aa24.07■■□□□ 1.44
OTUB1-208ENST00000536943 PTPRUQ92729 1446 aa24.06■■□□□ 1.44
OTUB1-208ENST00000536943 NRXN3Q9Y4C0 1643 aa24.06■■□□□ 1.44
OTUB1-208ENST00000536943 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
OTUB1-208ENST00000536943 ROBO1Q9Y6N7 1651 aa24.05■■□□□ 1.44
OTUB1-208ENST00000536943 METP08581 1390 aa24.04■■□□□ 1.44
OTUB1-208ENST00000536943 MED1Q15648 1581 aaPredicted RBP24.04■■□□□ 1.44
OTUB1-208ENST00000536943 RGL3Q3MIN7 710 aa24.04■■□□□ 1.44
OTUB1-208ENST00000536943 ILDR2Q71H61 639 aa24.03■■□□□ 1.44
OTUB1-208ENST00000536943 RAB3GAP2Q9H2M9 1393 aa24.02■■□□□ 1.44
OTUB1-208ENST00000536943 XRN1Q8IZH2 1706 aaKnown RBP23.99■■□□□ 1.43
OTUB1-208ENST00000536943 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.99■■□□□ 1.43
OTUB1-208ENST00000536943 PPLO60437 1756 aa23.98■■□□□ 1.43
OTUB1-208ENST00000536943 ANKRD30BQ9BXX2 1392 aa23.95■■□□□ 1.42
OTUB1-208ENST00000536943 DCCP43146 1447 aa23.94■■□□□ 1.42
OTUB1-208ENST00000536943 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
OTUB1-208ENST00000536943 SPATA31E1Q6ZUB1 1445 aa23.92■■□□□ 1.42
OTUB1-208ENST00000536943 ADGRF5Q8IZF2 1346 aa23.9■■□□□ 1.42
OTUB1-208ENST00000536943 ADGRL3Q9HAR2 1447 aa23.9■■□□□ 1.42
OTUB1-208ENST00000536943 SOCS7O14512 581 aa23.89■■□□□ 1.41
OTUB1-208ENST00000536943 PTCH1Q13635 1447 aa23.88■■□□□ 1.41
OTUB1-208ENST00000536943 HRCP23327 699 aa23.88■■□□□ 1.41
OTUB1-208ENST00000536943 JCADQ9P266 1359 aa23.87■■□□□ 1.41
OTUB1-208ENST00000536943 SETD1AO15047 1707 aaKnown RBP23.87■■□□□ 1.41
OTUB1-208ENST00000536943 BRINP3Q76B58 766 aa23.86■■□□□ 1.41
OTUB1-208ENST00000536943 ROBO2Q9HCK4 1378 aa23.84■■□□□ 1.41
OTUB1-208ENST00000536943 STK26Q9P289 416 aa23.84■■□□□ 1.41
OTUB1-208ENST00000536943 IFT172Q9UG01 1749 aa23.83■■□□□ 1.41
OTUB1-208ENST00000536943 MST1RQ04912 1400 aa23.83■■□□□ 1.4
OTUB1-208ENST00000536943 NALCNQ8IZF0 1738 aa23.82■■□□□ 1.4
OTUB1-208ENST00000536943 AHDC1Q5TGY3 1603 aaPredicted RBP23.81■■□□□ 1.4
OTUB1-208ENST00000536943 COL16A1Q07092 1604 aaPredicted RBP23.81■■□□□ 1.4
OTUB1-208ENST00000536943 PRAG1Q86YV5 1406 aa23.8■■□□□ 1.4
OTUB1-208ENST00000536943 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
OTUB1-208ENST00000536943 PIK3C2GO75747 1445 aa23.79■■□□□ 1.4
OTUB1-208ENST00000536943 TMEM132EQ6IEE7 984 aa23.78■■□□□ 1.4
OTUB1-208ENST00000536943 SPATA31A6Q5VVP1 1343 aa23.78■■□□□ 1.4
OTUB1-208ENST00000536943 LRPPRCP42704 1394 aaKnown RBP23.78■■□□□ 1.4
OTUB1-208ENST00000536943 MEX3CQ5U5Q3 659 aaKnown RBP23.77■■□□□ 1.4
OTUB1-208ENST00000536943 LRRC59Q96AG4 307 aaKnown RBP23.75■■□□□ 1.39
OTUB1-208ENST00000536943 MYOM2P54296 1465 aa23.75■■□□□ 1.39
OTUB1-208ENST00000536943 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
OTUB1-208ENST00000536943 C14orf93Q9H972 538 aaKnown RBP23.74■■□□□ 1.39
OTUB1-208ENST00000536943 DHX57Q6P158 1386 aaKnown RBP23.74■■□□□ 1.39
OTUB1-208ENST00000536943 ABCC11Q96J66 1382 aa23.74■■□□□ 1.39
OTUB1-208ENST00000536943 CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
OTUB1-208ENST00000536943 WAPLQ7Z5K2 1190 aa23.72■■□□□ 1.39
OTUB1-208ENST00000536943 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
OTUB1-208ENST00000536943 TECPR2O15040 1411 aa23.72■■□□□ 1.39
OTUB1-208ENST00000536943 YTHDC2Q9H6S0 1430 aaKnown RBP23.72■■□□□ 1.39
OTUB1-208ENST00000536943 LAMC1P11047 1609 aa23.71■■□□□ 1.39
OTUB1-208ENST00000536943 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
OTUB1-208ENST00000536943 STAC3Q96MF2 364 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms