RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SLC4A1APQ9BWU0 796 aaKnown RBP21.4■■□□□ 1.02
UBE3B-206ENST00000536398 BCANQ96GW7 911 aa21.39■■□□□ 1.01
UBE3B-206ENST00000536398 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
UBE3B-206ENST00000536398 FOXD1Q16676 465 aa21.37■■□□□ 1.01
UBE3B-206ENST00000536398 SPHKAPQ2M3C7 1700 aa21.37■■□□□ 1.01
UBE3B-206ENST00000536398 LRRC7Q96NW7 1537 aa21.35■■□□□ 1.01
UBE3B-206ENST00000536398 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
UBE3B-206ENST00000536398 PLEKHG1Q9ULL1 1385 aa21.35■■□□□ 1.01
UBE3B-206ENST00000536398 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.34■■□□□ 1.01
UBE3B-206ENST00000536398 CLTCL1P53675 1640 aa21.33■■□□□ 1
UBE3B-206ENST00000536398 SETD5Q9C0A6 1442 aa21.32■■□□□ 1
UBE3B-206ENST00000536398 KCNA6P17658 529 aa21.32■■□□□ 1
UBE3B-206ENST00000536398 ZNF326Q5BKZ1 582 aaKnown RBP21.32■■□□□ 1
UBE3B-206ENST00000536398 MPHOSPH9Q99550 1183 aa21.32■■□□□ 1
UBE3B-206ENST00000536398 TRPM2O94759 1503 aa21.32■■□□□ 1
UBE3B-206ENST00000536398 RBM33Q96EV2 1170 aaKnown RBP21.31■■□□□ 1
UBE3B-206ENST00000536398 PIP4K2BP78356 416 aa21.3■■□□□ 1
UBE3B-206ENST00000536398 TOM1O60784 492 aa21.28■■□□□ 1
UBE3B-206ENST00000536398 ADAMTS13Q76LX8 1427 aa21.28■■□□□ 1
UBE3B-206ENST00000536398 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
UBE3B-206ENST00000536398 TBX22Q9Y458 520 aa21.27■■□□□ 1
UBE3B-206ENST00000536398 ALKQ9UM73 1620 aa21.26■□□□□ 0.99
UBE3B-206ENST00000536398 RAB3GAP2Q9H2M9 1393 aa21.26■□□□□ 0.99
UBE3B-206ENST00000536398 PROSER2Q86WR7 435 aaPredicted RBP21.25■□□□□ 0.99
UBE3B-206ENST00000536398 TMEM94Q12767 1356 aa21.24■□□□□ 0.99
UBE3B-206ENST00000536398 XIRP1Q702N8 1843 aaKnown RBP21.21■□□□□ 0.99
UBE3B-206ENST00000536398 NEXMIFQ5QGS0 1516 aa21.2■□□□□ 0.98
UBE3B-206ENST00000536398 NWD1Q149M9 1564 aa21.2■□□□□ 0.98
UBE3B-206ENST00000536398 HSPA1LP34931 641 aa21.19■□□□□ 0.98
UBE3B-206ENST00000536398 KIF1BO60333 1816 aa21.19■□□□□ 0.98
UBE3B-206ENST00000536398 PTPRUQ92729 1446 aa21.18■□□□□ 0.98
UBE3B-206ENST00000536398 CHD2O14647 1828 aaKnown RBP21.18■□□□□ 0.98
UBE3B-206ENST00000536398 AMOTL2Q9Y2J4 779 aa21.17■□□□□ 0.98
UBE3B-206ENST00000536398 NRXN3Q9Y4C0 1643 aa21.17■□□□□ 0.98
UBE3B-206ENST00000536398 NKTRP30414 1462 aaKnown RBP21.16■□□□□ 0.98
UBE3B-206ENST00000536398 RGL3Q3MIN7 710 aa21.16■□□□□ 0.98
UBE3B-206ENST00000536398 CCDC144AA2RUR9 1427 aa21.15■□□□□ 0.98
UBE3B-206ENST00000536398 METP08581 1390 aa21.15■□□□□ 0.98
UBE3B-206ENST00000536398 DIP2AQ14689 1571 aa21.14■□□□□ 0.98
UBE3B-206ENST00000536398 SETBP1Q9Y6X0 1596 aa21.14■□□□□ 0.98
UBE3B-206ENST00000536398 PIK3R4Q99570 1358 aa21.14■□□□□ 0.98
UBE3B-206ENST00000536398 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
UBE3B-206ENST00000536398 RPGRIP1LQ68CZ1 1315 aa21.13■□□□□ 0.97
UBE3B-206ENST00000536398 VGFO15240 615 aaPredicted RBP21.13■□□□□ 0.97
UBE3B-206ENST00000536398 SPATA31E1Q6ZUB1 1445 aa21.11■□□□□ 0.97
UBE3B-206ENST00000536398 ADGRF5Q8IZF2 1346 aa21.09■□□□□ 0.97
UBE3B-206ENST00000536398 HRCP23327 699 aa21.09■□□□□ 0.97
UBE3B-206ENST00000536398 MSH6P52701 1360 aa21.08■□□□□ 0.96
UBE3B-206ENST00000536398 C14orf37Q86TY3 774 aa21.07■□□□□ 0.96
UBE3B-206ENST00000536398 PPLO60437 1756 aa21.05■□□□□ 0.96
UBE3B-206ENST00000536398 SLAIN2Q9P270 581 aa21.04■□□□□ 0.96
UBE3B-206ENST00000536398 ANKRD30BQ9BXX2 1392 aa21.04■□□□□ 0.96
UBE3B-206ENST00000536398 NCOA3Q9Y6Q9 1424 aa21.04■□□□□ 0.96
UBE3B-206ENST00000536398 XRN1Q8IZH2 1706 aaKnown RBP21.03■□□□□ 0.96
UBE3B-206ENST00000536398 FAM135BQ49AJ0 1406 aa21.03■□□□□ 0.96
UBE3B-206ENST00000536398 C19orf44Q9H6X5 657 aa21.02■□□□□ 0.96
UBE3B-206ENST00000536398 DISP3Q9P2K9 1392 aa21■□□□□ 0.95
UBE3B-206ENST00000536398 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
UBE3B-206ENST00000536398 ATF3P18847 181 aa20.98■□□□□ 0.95
UBE3B-206ENST00000536398 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
UBE3B-206ENST00000536398 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.97■□□□□ 0.95
UBE3B-206ENST00000536398 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
UBE3B-206ENST00000536398 IFT172Q9UG01 1749 aa20.96■□□□□ 0.95
UBE3B-206ENST00000536398 TMEM132EQ6IEE7 984 aa20.96■□□□□ 0.95
UBE3B-206ENST00000536398 CADPS2Q86UW7 1296 aa20.96■□□□□ 0.95
UBE3B-206ENST00000536398 STK26Q9P289 416 aa20.94■□□□□ 0.94
UBE3B-206ENST00000536398 PIK3C2GO75747 1445 aa20.94■□□□□ 0.94
UBE3B-206ENST00000536398 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
UBE3B-206ENST00000536398 CFAP70Q5T0N1 1121 aa20.91■□□□□ 0.94
UBE3B-206ENST00000536398 C14orf93Q9H972 538 aaKnown RBP20.91■□□□□ 0.94
UBE3B-206ENST00000536398 ADGRL3Q9HAR2 1447 aa20.9■□□□□ 0.94
UBE3B-206ENST00000536398 ILDR2Q71H61 639 aa20.9■□□□□ 0.94
UBE3B-206ENST00000536398 KDM2AQ9Y2K7 1162 aa20.9■□□□□ 0.94
UBE3B-206ENST00000536398 ASXL1Q8IXJ9 1541 aa20.89■□□□□ 0.94
UBE3B-206ENST00000536398 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
UBE3B-206ENST00000536398 BRINP3Q76B58 766 aa20.88■□□□□ 0.93
UBE3B-206ENST00000536398 WAPLQ7Z5K2 1190 aa20.88■□□□□ 0.93
UBE3B-206ENST00000536398 DCAF11Q8TEB1 546 aa20.88■□□□□ 0.93
UBE3B-206ENST00000536398 MYOM2P54296 1465 aa20.88■□□□□ 0.93
UBE3B-206ENST00000536398 DCCP43146 1447 aa20.87■□□□□ 0.93
UBE3B-206ENST00000536398 MST1RQ04912 1400 aa20.87■□□□□ 0.93
UBE3B-206ENST00000536398 PRAG1Q86YV5 1406 aa20.87■□□□□ 0.93
UBE3B-206ENST00000536398 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
UBE3B-206ENST00000536398 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
UBE3B-206ENST00000536398 NALCNQ8IZF0 1738 aa20.87■□□□□ 0.93
UBE3B-206ENST00000536398 DHX57Q6P158 1386 aaKnown RBP20.85■□□□□ 0.93
UBE3B-206ENST00000536398 ABCC11Q96J66 1382 aa20.85■□□□□ 0.93
UBE3B-206ENST00000536398 PLEKHH1Q9ULM0 1364 aa20.85■□□□□ 0.93
UBE3B-206ENST00000536398 YTHDC2Q9H6S0 1430 aaKnown RBP20.84■□□□□ 0.93
UBE3B-206ENST00000536398 PHLPP1O60346 1717 aa20.83■□□□□ 0.92
UBE3B-206ENST00000536398 TECPR2O15040 1411 aa20.82■□□□□ 0.92
UBE3B-206ENST00000536398 DDX17Q92841 729 aaKnown RBP20.82■□□□□ 0.92
UBE3B-206ENST00000536398 C1orf167Q5SNV9 1468 aa20.8■□□□□ 0.92
UBE3B-206ENST00000536398 ORAI2Q96SN7 254 aa20.79■□□□□ 0.92
UBE3B-206ENST00000536398 COL16A1Q07092 1604 aaPredicted RBP20.78■□□□□ 0.92
UBE3B-206ENST00000536398 AHDC1Q5TGY3 1603 aaPredicted RBP20.78■□□□□ 0.92
UBE3B-206ENST00000536398 TRIM26Q12899 539 aaPredicted RBP20.77■□□□□ 0.92
UBE3B-206ENST00000536398 SIN3AQ96ST3 1273 aa20.77■□□□□ 0.92
UBE3B-206ENST00000536398 JCADQ9P266 1359 aa20.76■□□□□ 0.91
UBE3B-206ENST00000536398 SAFB2Q14151 953 aaKnown RBP eCLIP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms