RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
TNFRSF1A-208ENST00000536194 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
TNFRSF1A-208ENST00000536194 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
TNFRSF1A-208ENST00000536194 STRCP1A6NGW2 1772 aa16.73■□□□□ 0.27
TNFRSF1A-208ENST00000536194 PPLO60437 1756 aa16.73■□□□□ 0.27
TNFRSF1A-208ENST00000536194 ANKRD30BQ9BXX2 1392 aa16.73■□□□□ 0.27
TNFRSF1A-208ENST00000536194 IFT172Q9UG01 1749 aa16.72■□□□□ 0.27
TNFRSF1A-208ENST00000536194 ZNF335Q9H4Z2 1342 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-208ENST00000536194 SPATA31E1Q6ZUB1 1445 aa16.71■□□□□ 0.27
TNFRSF1A-208ENST00000536194 NUTM2DQ5VT03 806 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-208ENST00000536194 NRXN3Q9Y4C0 1643 aa16.7■□□□□ 0.26
TNFRSF1A-208ENST00000536194 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
TNFRSF1A-208ENST00000536194 ZNF326Q5BKZ1 582 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-208ENST00000536194 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.67■□□□□ 0.26
TNFRSF1A-208ENST00000536194 SENP3Q9H4L4 574 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1A-208ENST00000536194 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1A-208ENST00000536194 ADAMTS13Q76LX8 1427 aa16.66■□□□□ 0.26
TNFRSF1A-208ENST00000536194 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
TNFRSF1A-208ENST00000536194 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-208ENST00000536194 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
TNFRSF1A-208ENST00000536194 DHX57Q6P158 1386 aaKnown RBP16.64■□□□□ 0.26
TNFRSF1A-208ENST00000536194 SETD1AO15047 1707 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-208ENST00000536194 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
TNFRSF1A-208ENST00000536194 CHD2O14647 1828 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-208ENST00000536194 RGL3Q3MIN7 710 aa16.63■□□□□ 0.25
TNFRSF1A-208ENST00000536194 NWD1Q149M9 1564 aa16.62■□□□□ 0.25
TNFRSF1A-208ENST00000536194 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
TNFRSF1A-208ENST00000536194 CPS1P31327 1500 aa16.61■□□□□ 0.25
TNFRSF1A-208ENST00000536194 CERKQ8TCT0 537 aa16.61■□□□□ 0.25
TNFRSF1A-208ENST00000536194 PCGF6Q9BYE7 350 aa16.61■□□□□ 0.25
TNFRSF1A-208ENST00000536194 XIRP1Q702N8 1843 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-208ENST00000536194 BCANQ96GW7 911 aa16.6■□□□□ 0.25
TNFRSF1A-208ENST00000536194 TBX22Q9Y458 520 aa16.59■□□□□ 0.25
TNFRSF1A-208ENST00000536194 ADGRF5Q8IZF2 1346 aa16.58■□□□□ 0.24
TNFRSF1A-208ENST00000536194 ALKQ9UM73 1620 aa16.57■□□□□ 0.24
TNFRSF1A-208ENST00000536194 LRRC7Q96NW7 1537 aa16.57■□□□□ 0.24
TNFRSF1A-208ENST00000536194 VGFO15240 615 aaPredicted RBP16.57■□□□□ 0.24
TNFRSF1A-208ENST00000536194 XRN1Q8IZH2 1706 aaKnown RBP16.56■□□□□ 0.24
TNFRSF1A-208ENST00000536194 MYOM2P54296 1465 aa16.56■□□□□ 0.24
TNFRSF1A-208ENST00000536194 PTPRUQ92729 1446 aa16.56■□□□□ 0.24
TNFRSF1A-208ENST00000536194 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
TNFRSF1A-208ENST00000536194 NRXN1Q9ULB1 1477 aa16.55■□□□□ 0.24
TNFRSF1A-208ENST00000536194 METP08581 1390 aa16.55■□□□□ 0.24
TNFRSF1A-208ENST00000536194 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
TNFRSF1A-208ENST00000536194 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
TNFRSF1A-208ENST00000536194 KCNA6P17658 529 aa16.54■□□□□ 0.24
TNFRSF1A-208ENST00000536194 PIK3R4Q99570 1358 aa16.53■□□□□ 0.24
TNFRSF1A-208ENST00000536194 ASXL1Q8IXJ9 1541 aa16.52■□□□□ 0.24
TNFRSF1A-208ENST00000536194 ILDR1Q86SU0 546 aaPredicted RBP16.52■□□□□ 0.24
TNFRSF1A-208ENST00000536194 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.24
TNFRSF1A-208ENST00000536194 LAMC1P11047 1609 aa16.49■□□□□ 0.23
TNFRSF1A-208ENST00000536194 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
TNFRSF1A-208ENST00000536194 RBM33Q96EV2 1170 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1A-208ENST00000536194 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
TNFRSF1A-208ENST00000536194 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
TNFRSF1A-208ENST00000536194 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
TNFRSF1A-208ENST00000536194 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-208ENST00000536194 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
TNFRSF1A-208ENST00000536194 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
TNFRSF1A-208ENST00000536194 KNDC1Q76NI1 1749 aa16.45■□□□□ 0.22
TNFRSF1A-208ENST00000536194 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
TNFRSF1A-208ENST00000536194 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
TNFRSF1A-208ENST00000536194 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
TNFRSF1A-208ENST00000536194 C14orf93Q9H972 538 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-208ENST00000536194 NALCNQ8IZF0 1738 aa16.43■□□□□ 0.22
TNFRSF1A-208ENST00000536194 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
TNFRSF1A-208ENST00000536194 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
TNFRSF1A-208ENST00000536194 ROBO2Q9HCK4 1378 aa16.42■□□□□ 0.22
TNFRSF1A-208ENST00000536194 TMEM132EQ6IEE7 984 aa16.42■□□□□ 0.22
TNFRSF1A-208ENST00000536194 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
TNFRSF1A-208ENST00000536194 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-208ENST00000536194 TECPR2O15040 1411 aa16.41■□□□□ 0.22
TNFRSF1A-208ENST00000536194 KIAA1210Q9ULL0 1709 aa16.41■□□□□ 0.22
TNFRSF1A-208ENST00000536194 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-208ENST00000536194 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
TNFRSF1A-208ENST00000536194 LRPPRCP42704 1394 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-208ENST00000536194 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
TNFRSF1A-208ENST00000536194 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
TNFRSF1A-208ENST00000536194 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
TNFRSF1A-208ENST00000536194 MSH6P52701 1360 aa16.37■□□□□ 0.21
TNFRSF1A-208ENST00000536194 STK26Q9P289 416 aa16.36■□□□□ 0.21
TNFRSF1A-208ENST00000536194 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
TNFRSF1A-208ENST00000536194 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-208ENST00000536194 PLEKHH1Q9ULM0 1364 aa16.35■□□□□ 0.21
TNFRSF1A-208ENST00000536194 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
TNFRSF1A-208ENST00000536194 TOM1O60784 492 aa16.34■□□□□ 0.21
TNFRSF1A-208ENST00000536194 WAPLQ7Z5K2 1190 aa16.33■□□□□ 0.2
TNFRSF1A-208ENST00000536194 C19orf44Q9H6X5 657 aa16.33■□□□□ 0.2
TNFRSF1A-208ENST00000536194 TONSLQ96HA7 1378 aa16.33■□□□□ 0.2
TNFRSF1A-208ENST00000536194 DCCP43146 1447 aa16.33■□□□□ 0.2
TNFRSF1A-208ENST00000536194 PIP4K2BP78356 416 aa16.32■□□□□ 0.2
TNFRSF1A-208ENST00000536194 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
TNFRSF1A-208ENST00000536194 FAM135BQ49AJ0 1406 aa16.32■□□□□ 0.2
TNFRSF1A-208ENST00000536194 C14orf37Q86TY3 774 aa16.32■□□□□ 0.2
TNFRSF1A-208ENST00000536194 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
TNFRSF1A-208ENST00000536194 ROBO1Q9Y6N7 1651 aa16.32■□□□□ 0.2
TNFRSF1A-208ENST00000536194 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
TNFRSF1A-208ENST00000536194 CDC42BPGQ6DT37 1551 aa16.3■□□□□ 0.2
TNFRSF1A-208ENST00000536194 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-208ENST00000536194 CCER1Q8TC90 406 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms