RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 LTKP29376 864 aa15.97■□□□□ 0.15
UBE3B-205ENST00000535900 RAB3GAP2Q9H2M9 1393 aa15.97■□□□□ 0.15
UBE3B-205ENST00000535900 XIRP1Q702N8 1843 aaKnown RBP15.95■□□□□ 0.14
UBE3B-205ENST00000535900 MYO5BQ9ULV0 1848 aa15.94■□□□□ 0.14
UBE3B-205ENST00000535900 IDI1Q13907 227 aa15.93■□□□□ 0.14
UBE3B-205ENST00000535900 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-205ENST00000535900 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
UBE3B-205ENST00000535900 NWD1Q149M9 1564 aa15.92■□□□□ 0.14
UBE3B-205ENST00000535900 E9PCH4 1651 aa15.91■□□□□ 0.14
UBE3B-205ENST00000535900 SLC52A1Q9NWF4 448 aa15.9■□□□□ 0.14
UBE3B-205ENST00000535900 NKTRP30414 1462 aaKnown RBP15.9■□□□□ 0.14
UBE3B-205ENST00000535900 TMEM131LA2VDJ0 1609 aa15.89■□□□□ 0.13
UBE3B-205ENST00000535900 BCANQ96GW7 911 aa15.88■□□□□ 0.13
UBE3B-205ENST00000535900 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-205ENST00000535900 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
UBE3B-205ENST00000535900 TMEM94Q12767 1356 aa15.87■□□□□ 0.13
UBE3B-205ENST00000535900 ZFYVE9O95405 1425 aa15.86■□□□□ 0.13
UBE3B-205ENST00000535900 RIMS2Q9UQ26 1411 aa15.86■□□□□ 0.13
UBE3B-205ENST00000535900 PHF23Q9BUL5 403 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-205ENST00000535900 CLSPNQ9HAW4 1339 aa15.86■□□□□ 0.13
UBE3B-205ENST00000535900 PLEKHG1Q9ULL1 1385 aa15.85■□□□□ 0.13
UBE3B-205ENST00000535900 KCNA6P17658 529 aa15.84■□□□□ 0.13
UBE3B-205ENST00000535900 ROBO1Q9Y6N7 1651 aa15.83■□□□□ 0.13
UBE3B-205ENST00000535900 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
UBE3B-205ENST00000535900 DIP2AQ14689 1571 aa15.83■□□□□ 0.12
UBE3B-205ENST00000535900 ZEB1P37275 1124 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-205ENST00000535900 TRIM52Q96A61 297 aa15.82■□□□□ 0.12
UBE3B-205ENST00000535900 SPHKAPQ2M3C7 1700 aa15.82■□□□□ 0.12
UBE3B-205ENST00000535900 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
UBE3B-205ENST00000535900 NUP155O75694 1391 aa15.81■□□□□ 0.12
UBE3B-205ENST00000535900 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
UBE3B-205ENST00000535900 PROSER2Q86WR7 435 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-205ENST00000535900 MSH6P52701 1360 aa15.8■□□□□ 0.12
UBE3B-205ENST00000535900 HDGFP51858 240 aaKnown RBP15.8■□□□□ 0.12
UBE3B-205ENST00000535900 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-205ENST00000535900 FAM135BQ49AJ0 1406 aa15.79■□□□□ 0.12
UBE3B-205ENST00000535900 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.78■□□□□ 0.12
UBE3B-205ENST00000535900 RBM33Q96EV2 1170 aaKnown RBP15.78■□□□□ 0.12
UBE3B-205ENST00000535900 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.12
UBE3B-205ENST00000535900 TRPM2O94759 1503 aa15.77■□□□□ 0.11
UBE3B-205ENST00000535900 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
UBE3B-205ENST00000535900 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
UBE3B-205ENST00000535900 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
UBE3B-205ENST00000535900 NUTM2DQ5VT03 806 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-205ENST00000535900 C14orf37Q86TY3 774 aa15.73■□□□□ 0.11
UBE3B-205ENST00000535900 CLTCL1P53675 1640 aa15.72■□□□□ 0.11
UBE3B-205ENST00000535900 TBX22Q9Y458 520 aa15.72■□□□□ 0.11
UBE3B-205ENST00000535900 PIK3R4Q99570 1358 aa15.72■□□□□ 0.11
UBE3B-205ENST00000535900 NRXN3Q9Y4C0 1643 aa15.71■□□□□ 0.11
UBE3B-205ENST00000535900 SETBP1Q9Y6X0 1596 aa15.7■□□□□ 0.1
UBE3B-205ENST00000535900 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.7■□□□□ 0.1
UBE3B-205ENST00000535900 NCOA3Q9Y6Q9 1424 aa15.69■□□□□ 0.1
UBE3B-205ENST00000535900 XRN1Q8IZH2 1706 aaKnown RBP15.69■□□□□ 0.1
UBE3B-205ENST00000535900 KIF1BO60333 1816 aa15.68■□□□□ 0.1
UBE3B-205ENST00000535900 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
UBE3B-205ENST00000535900 COL16A1Q07092 1604 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-205ENST00000535900 SLAIN2Q9P270 581 aa15.67■□□□□ 0.1
UBE3B-205ENST00000535900 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
UBE3B-205ENST00000535900 ANKRD30BQ9BXX2 1392 aa15.65■□□□□ 0.1
UBE3B-205ENST00000535900 TIMELESSQ9UNS1 1208 aa15.65■□□□□ 0.1
UBE3B-205ENST00000535900 PTPRUQ92729 1446 aa15.65■□□□□ 0.1
UBE3B-205ENST00000535900 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
UBE3B-205ENST00000535900 JCADQ9P266 1359 aa15.64■□□□□ 0.09
UBE3B-205ENST00000535900 CADPS2Q86UW7 1296 aa15.64■□□□□ 0.09
UBE3B-205ENST00000535900 DCCP43146 1447 aa15.63■□□□□ 0.09
UBE3B-205ENST00000535900 ATF3P18847 181 aa15.63■□□□□ 0.09
UBE3B-205ENST00000535900 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
UBE3B-205ENST00000535900 SHPRHQ149N8 1683 aa15.61■□□□□ 0.09
UBE3B-205ENST00000535900 NALCNQ8IZF0 1738 aa15.61■□□□□ 0.09
UBE3B-205ENST00000535900 C19orf44Q9H6X5 657 aa15.61■□□□□ 0.09
UBE3B-205ENST00000535900 RGS17Q9UGC6 210 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-205ENST00000535900 ASXL1Q8IXJ9 1541 aa15.59■□□□□ 0.09
UBE3B-205ENST00000535900 METP08581 1390 aa15.59■□□□□ 0.09
UBE3B-205ENST00000535900 SETD1AO15047 1707 aaKnown RBP15.58■□□□□ 0.08
UBE3B-205ENST00000535900 ADGRL3Q9HAR2 1447 aa15.58■□□□□ 0.08
UBE3B-205ENST00000535900 LRP6O75581 1613 aa15.57■□□□□ 0.08
UBE3B-205ENST00000535900 NHSL1Q5SYE7 1610 aa15.57■□□□□ 0.08
UBE3B-205ENST00000535900 PPLO60437 1756 aa15.57■□□□□ 0.08
UBE3B-205ENST00000535900 FOXD1Q16676 465 aa15.56■□□□□ 0.08
UBE3B-205ENST00000535900 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
UBE3B-205ENST00000535900 MST1RQ04912 1400 aa15.56■□□□□ 0.08
UBE3B-205ENST00000535900 SPATA31A6Q5VVP1 1343 aa15.55■□□□□ 0.08
UBE3B-205ENST00000535900 MEX3CQ5U5Q3 659 aaKnown RBP15.55■□□□□ 0.08
UBE3B-205ENST00000535900 POTEAQ6S8J7 498 aa15.55■□□□□ 0.08
UBE3B-205ENST00000535900 PTCH1Q13635 1447 aa15.54■□□□□ 0.08
UBE3B-205ENST00000535900 BRINP3Q76B58 766 aa15.54■□□□□ 0.08
UBE3B-205ENST00000535900 SIN3AQ96ST3 1273 aa15.52■□□□□ 0.08
UBE3B-205ENST00000535900 TONSLQ96HA7 1378 aa15.51■□□□□ 0.07
UBE3B-205ENST00000535900 VGFO15240 615 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-205ENST00000535900 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
UBE3B-205ENST00000535900 STAC3Q96MF2 364 aa15.49■□□□□ 0.07
UBE3B-205ENST00000535900 IFT172Q9UG01 1749 aa15.48■□□□□ 0.07
UBE3B-205ENST00000535900 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
UBE3B-205ENST00000535900 PRAG1Q86YV5 1406 aa15.48■□□□□ 0.07
UBE3B-205ENST00000535900 ROBO2Q9HCK4 1378 aa15.47■□□□□ 0.07
UBE3B-205ENST00000535900 C1orf167Q5SNV9 1468 aa15.46■□□□□ 0.07
UBE3B-205ENST00000535900 NUTM2BA6NNL0 878 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-205ENST00000535900 NUTM2EB1AL46 878 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-205ENST00000535900 ZNF772Q68DY9 489 aaPredicted RBP15.46■□□□□ 0.07
UBE3B-205ENST00000535900 NUTM2AQ8IVF1 878 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms