RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 IDI1Q13907 227 aa19.58■□□□□ 0.72
CHFR-210ENST00000535527 ARHGAP23Q9P227 1491 aa19.58■□□□□ 0.72
CHFR-210ENST00000535527 SLIT1O75093 1534 aa19.57■□□□□ 0.72
CHFR-210ENST00000535527 MPHOSPH9Q99550 1183 aa19.57■□□□□ 0.72
CHFR-210ENST00000535527 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
CHFR-210ENST00000535527 IFT172Q9UG01 1749 aa19.54■□□□□ 0.72
CHFR-210ENST00000535527 IQGAP1P46940 1657 aa19.52■□□□□ 0.71
CHFR-210ENST00000535527 ZFYVE9O95405 1425 aa19.51■□□□□ 0.71
CHFR-210ENST00000535527 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
CHFR-210ENST00000535527 HRCP23327 699 aa19.51■□□□□ 0.71
CHFR-210ENST00000535527 PPLO60437 1756 aa19.51■□□□□ 0.71
CHFR-210ENST00000535527 NEXMIFQ5QGS0 1516 aa19.51■□□□□ 0.71
CHFR-210ENST00000535527 NRXN3Q9Y4C0 1643 aa19.49■□□□□ 0.71
CHFR-210ENST00000535527 STRCP1A6NGW2 1772 aa19.48■□□□□ 0.71
CHFR-210ENST00000535527 TMEM2Q9UHN6 1383 aa19.47■□□□□ 0.71
CHFR-210ENST00000535527 RGS17Q9UGC6 210 aaPredicted RBP19.47■□□□□ 0.71
CHFR-210ENST00000535527 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
CHFR-210ENST00000535527 SPATA31E1Q6ZUB1 1445 aa19.46■□□□□ 0.71
CHFR-210ENST00000535527 SLC52A1Q9NWF4 448 aa19.46■□□□□ 0.71
CHFR-210ENST00000535527 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
CHFR-210ENST00000535527 DHX57Q6P158 1386 aaKnown RBP19.45■□□□□ 0.7
CHFR-210ENST00000535527 LTKP29376 864 aa19.45■□□□□ 0.7
CHFR-210ENST00000535527 SETD1AO15047 1707 aaKnown RBP19.45■□□□□ 0.7
CHFR-210ENST00000535527 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
CHFR-210ENST00000535527 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
CHFR-210ENST00000535527 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
CHFR-210ENST00000535527 CCDC144AA2RUR9 1427 aa19.41■□□□□ 0.7
CHFR-210ENST00000535527 FAM135BQ49AJ0 1406 aa19.38■□□□□ 0.69
CHFR-210ENST00000535527 CHGAP10645 457 aaKnown RBP19.37■□□□□ 0.69
CHFR-210ENST00000535527 NUTM2DQ5VT03 806 aaPredicted RBP19.37■□□□□ 0.69
CHFR-210ENST00000535527 ACIN1Q9UKV3 1341 aaKnown RBP19.36■□□□□ 0.69
CHFR-210ENST00000535527 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
CHFR-210ENST00000535527 XIRP1Q702N8 1843 aaKnown RBP19.35■□□□□ 0.69
CHFR-210ENST00000535527 ADAMTS13Q76LX8 1427 aa19.34■□□□□ 0.69
CHFR-210ENST00000535527 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
CHFR-210ENST00000535527 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
CHFR-210ENST00000535527 POTEAQ6S8J7 498 aa19.33■□□□□ 0.68
CHFR-210ENST00000535527 CHD2O14647 1828 aaKnown RBP19.32■□□□□ 0.68
CHFR-210ENST00000535527 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
CHFR-210ENST00000535527 NWD1Q149M9 1564 aa19.32■□□□□ 0.68
CHFR-210ENST00000535527 PLEKHG1Q9ULL1 1385 aa19.32■□□□□ 0.68
CHFR-210ENST00000535527 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
CHFR-210ENST00000535527 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
CHFR-210ENST00000535527 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
CHFR-210ENST00000535527 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
CHFR-210ENST00000535527 MYOM2P54296 1465 aa19.27■□□□□ 0.67
CHFR-210ENST00000535527 SIN3AQ96ST3 1273 aa19.26■□□□□ 0.67
CHFR-210ENST00000535527 RGL3Q3MIN7 710 aa19.25■□□□□ 0.67
CHFR-210ENST00000535527 ZNF326Q5BKZ1 582 aaKnown RBP19.25■□□□□ 0.67
CHFR-210ENST00000535527 PTPRUQ92729 1446 aa19.25■□□□□ 0.67
CHFR-210ENST00000535527 ADGRF5Q8IZF2 1346 aa19.25■□□□□ 0.67
CHFR-210ENST00000535527 TMEM94Q12767 1356 aa19.24■□□□□ 0.67
CHFR-210ENST00000535527 KCNA6P17658 529 aa19.24■□□□□ 0.67
CHFR-210ENST00000535527 SLC26A8Q96RN1 970 aa19.24■□□□□ 0.67
CHFR-210ENST00000535527 PIK3C2GO75747 1445 aa19.24■□□□□ 0.67
CHFR-210ENST00000535527 ROBO1Q9Y6N7 1651 aa19.2■□□□□ 0.66
CHFR-210ENST00000535527 PROSER2Q86WR7 435 aaPredicted RBP19.2■□□□□ 0.66
CHFR-210ENST00000535527 METP08581 1390 aa19.19■□□□□ 0.66
CHFR-210ENST00000535527 LAMC1P11047 1609 aa19.19■□□□□ 0.66
CHFR-210ENST00000535527 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
CHFR-210ENST00000535527 KNDC1Q76NI1 1749 aa19.18■□□□□ 0.66
CHFR-210ENST00000535527 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.18■□□□□ 0.66
CHFR-210ENST00000535527 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
CHFR-210ENST00000535527 ADGRB1O14514 1584 aa19.17■□□□□ 0.66
CHFR-210ENST00000535527 JCADQ9P266 1359 aa19.17■□□□□ 0.66
CHFR-210ENST00000535527 SLAIN2Q9P270 581 aa19.15■□□□□ 0.66
CHFR-210ENST00000535527 NALCNQ8IZF0 1738 aa19.14■□□□□ 0.66
CHFR-210ENST00000535527 MSH6P52701 1360 aa19.14■□□□□ 0.65
CHFR-210ENST00000535527 NKTRP30414 1462 aaKnown RBP19.14■□□□□ 0.65
CHFR-210ENST00000535527 TRPM1Q7Z4N2 1603 aa19.14■□□□□ 0.65
CHFR-210ENST00000535527 KIAA1210Q9ULL0 1709 aa19.14■□□□□ 0.65
CHFR-210ENST00000535527 TBX22Q9Y458 520 aa19.12■□□□□ 0.65
CHFR-210ENST00000535527 PRAG1Q86YV5 1406 aa19.11■□□□□ 0.65
CHFR-210ENST00000535527 PHLPP1O60346 1717 aa19.11■□□□□ 0.65
CHFR-210ENST00000535527 VGFO15240 615 aaPredicted RBP19.1■□□□□ 0.65
CHFR-210ENST00000535527 NEUROD1Q13562 356 aa19.1■□□□□ 0.65
CHFR-210ENST00000535527 ZNF772Q68DY9 489 aaPredicted RBP19.1■□□□□ 0.65
CHFR-210ENST00000535527 UPF1Q92900 1129 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHFR-210ENST00000535527 RBM33Q96EV2 1170 aaKnown RBP19.1■□□□□ 0.65
CHFR-210ENST00000535527 ARHGEF28Q8N1W1 1705 aaKnown RBP19.1■□□□□ 0.65
CHFR-210ENST00000535527 SPATA31A6Q5VVP1 1343 aa19.09■□□□□ 0.65
CHFR-210ENST00000535527 DCAF11Q8TEB1 546 aa19.09■□□□□ 0.65
CHFR-210ENST00000535527 L3MBTL2Q969R5 705 aa19.09■□□□□ 0.65
CHFR-210ENST00000535527 BCANQ96GW7 911 aa19.09■□□□□ 0.65
CHFR-210ENST00000535527 PIK3R4Q99570 1358 aa19.08■□□□□ 0.65
CHFR-210ENST00000535527 HDGFP51858 240 aaKnown RBP19.08■□□□□ 0.64
CHFR-210ENST00000535527 KDM2AQ9Y2K7 1162 aa19.08■□□□□ 0.64
CHFR-210ENST00000535527 CFAP70Q5T0N1 1121 aa19.07■□□□□ 0.64
CHFR-210ENST00000535527 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.07■□□□□ 0.64
CHFR-210ENST00000535527 NCOA3Q9Y6Q9 1424 aa19.06■□□□□ 0.64
CHFR-210ENST00000535527 ROBO2Q9HCK4 1378 aa19.05■□□□□ 0.64
CHFR-210ENST00000535527 TECPR2O15040 1411 aa19.04■□□□□ 0.64
CHFR-210ENST00000535527 TMEM132EQ6IEE7 984 aa19.04■□□□□ 0.64
CHFR-210ENST00000535527 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
CHFR-210ENST00000535527 MEX3CQ5U5Q3 659 aaKnown RBP19.03■□□□□ 0.64
CHFR-210ENST00000535527 C14orf93Q9H972 538 aaKnown RBP19.03■□□□□ 0.64
CHFR-210ENST00000535527 COL16A1Q07092 1604 aaPredicted RBP19.03■□□□□ 0.64
CHFR-210ENST00000535527 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
CHFR-210ENST00000535527 AMOTL2Q9Y2J4 779 aa19.02■□□□□ 0.64
CHFR-210ENST00000535527 NBPF8Q3BBV2 869 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms