RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 E9PCH4 1651 aa12.24□□□□□ -0.45
NPIPB3-207ENST00000535190 ITGAEP38570 1179 aa12.24□□□□□ -0.45
NPIPB3-207ENST00000535190 SLC26A8Q96RN1 970 aa12.24□□□□□ -0.45
NPIPB3-207ENST00000535190 RRBP1Q9P2E9 1410 aaKnown RBP12.24□□□□□ -0.45
NPIPB3-207ENST00000535190 IQGAP3Q86VI3 1631 aa12.23□□□□□ -0.45
NPIPB3-207ENST00000535190 NUP155O75694 1391 aa12.23□□□□□ -0.45
NPIPB3-207ENST00000535190 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
NPIPB3-207ENST00000535190 PLEKHG1Q9ULL1 1385 aa12.2□□□□□ -0.46
NPIPB3-207ENST00000535190 SCAF1Q9H7N4 1312 aaKnown RBP12.2□□□□□ -0.46
NPIPB3-207ENST00000535190 TBX22Q9Y458 520 aa12.2□□□□□ -0.46
NPIPB3-207ENST00000535190 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
NPIPB3-207ENST00000535190 PROSER2Q86WR7 435 aaPredicted RBP12.19□□□□□ -0.46
NPIPB3-207ENST00000535190 CHD2O14647 1828 aaKnown RBP12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 SOCS7O14512 581 aa12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 RBM33Q96EV2 1170 aaKnown RBP12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 NAIPQ13075 1403 aa12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 ADAMTS13Q76LX8 1427 aa12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
NPIPB3-207ENST00000535190 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
NPIPB3-207ENST00000535190 FAM135BQ49AJ0 1406 aa12.17□□□□□ -0.46
NPIPB3-207ENST00000535190 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
NPIPB3-207ENST00000535190 NUTM2DQ5VT03 806 aaPredicted RBP12.16□□□□□ -0.46
NPIPB3-207ENST00000535190 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
NPIPB3-207ENST00000535190 MED1Q15648 1581 aaPredicted RBP12.13□□□□□ -0.47
NPIPB3-207ENST00000535190 BCANQ96GW7 911 aa12.13□□□□□ -0.47
NPIPB3-207ENST00000535190 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
NPIPB3-207ENST00000535190 PPP1R15AO75807 674 aaPredicted RBP12.12□□□□□ -0.47
NPIPB3-207ENST00000535190 PIK3R4Q99570 1358 aa12.12□□□□□ -0.47
NPIPB3-207ENST00000535190 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
NPIPB3-207ENST00000535190 SPHKAPQ2M3C7 1700 aa12.11□□□□□ -0.47
NPIPB3-207ENST00000535190 HFM1A2PYH4 1435 aa12.11□□□□□ -0.47
NPIPB3-207ENST00000535190 SLAIN2Q9P270 581 aa12.1□□□□□ -0.47
NPIPB3-207ENST00000535190 RGS17Q9UGC6 210 aaPredicted RBP12.1□□□□□ -0.47
NPIPB3-207ENST00000535190 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
NPIPB3-207ENST00000535190 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
NPIPB3-207ENST00000535190 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
NPIPB3-207ENST00000535190 MSH6P52701 1360 aa12.08□□□□□ -0.48
NPIPB3-207ENST00000535190 CLTCL1P53675 1640 aa12.08□□□□□ -0.48
NPIPB3-207ENST00000535190 TRPM2O94759 1503 aa12.07□□□□□ -0.48
NPIPB3-207ENST00000535190 ROBO1Q9Y6N7 1651 aa12.07□□□□□ -0.48
NPIPB3-207ENST00000535190 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
NPIPB3-207ENST00000535190 SETBP1Q9Y6X0 1596 aa12.07□□□□□ -0.48
NPIPB3-207ENST00000535190 METP08581 1390 aa12.06□□□□□ -0.48
NPIPB3-207ENST00000535190 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
NPIPB3-207ENST00000535190 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
NPIPB3-207ENST00000535190 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.05□□□□□ -0.48
NPIPB3-207ENST00000535190 ZNF326Q5BKZ1 582 aaKnown RBP12.04□□□□□ -0.48
NPIPB3-207ENST00000535190 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
NPIPB3-207ENST00000535190 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
NPIPB3-207ENST00000535190 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
NPIPB3-207ENST00000535190 KIF1BO60333 1816 aa12.02□□□□□ -0.48
NPIPB3-207ENST00000535190 RPGRIP1LQ68CZ1 1315 aa12.02□□□□□ -0.49
NPIPB3-207ENST00000535190 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
NPIPB3-207ENST00000535190 ATF3P18847 181 aa12□□□□□ -0.49
NPIPB3-207ENST00000535190 MPHOSPH9Q99550 1183 aa12□□□□□ -0.49
NPIPB3-207ENST00000535190 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
NPIPB3-207ENST00000535190 MSH5O43196 834 aa11.99□□□□□ -0.49
NPIPB3-207ENST00000535190 POTEAQ6S8J7 498 aa11.99□□□□□ -0.49
NPIPB3-207ENST00000535190 BRINP3Q76B58 766 aa11.99□□□□□ -0.49
NPIPB3-207ENST00000535190 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
NPIPB3-207ENST00000535190 PHLPP1O60346 1717 aa11.99□□□□□ -0.49
NPIPB3-207ENST00000535190 DCCP43146 1447 aa11.98□□□□□ -0.49
NPIPB3-207ENST00000535190 JCADQ9P266 1359 aa11.98□□□□□ -0.49
NPIPB3-207ENST00000535190 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
NPIPB3-207ENST00000535190 AHDC1Q5TGY3 1603 aaPredicted RBP11.97□□□□□ -0.49
NPIPB3-207ENST00000535190 MST1RQ04912 1400 aa11.97□□□□□ -0.49
NPIPB3-207ENST00000535190 SPATA31E1Q6ZUB1 1445 aa11.97□□□□□ -0.49
NPIPB3-207ENST00000535190 PRAG1Q86YV5 1406 aa11.97□□□□□ -0.49
NPIPB3-207ENST00000535190 PPLO60437 1756 aa11.97□□□□□ -0.49
NPIPB3-207ENST00000535190 ROBO2Q9HCK4 1378 aa11.96□□□□□ -0.49
NPIPB3-207ENST00000535190 ADGRF5Q8IZF2 1346 aa11.96□□□□□ -0.49
NPIPB3-207ENST00000535190 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
NPIPB3-207ENST00000535190 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
NPIPB3-207ENST00000535190 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
NPIPB3-207ENST00000535190 RGL3Q3MIN7 710 aa11.93□□□□□ -0.5
NPIPB3-207ENST00000535190 LRP6O75581 1613 aa11.93□□□□□ -0.5
NPIPB3-207ENST00000535190 SPATA31A6Q5VVP1 1343 aa11.92□□□□□ -0.5
NPIPB3-207ENST00000535190 NALCNQ8IZF0 1738 aa11.92□□□□□ -0.5
NPIPB3-207ENST00000535190 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
NPIPB3-207ENST00000535190 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
NPIPB3-207ENST00000535190 C1orf167Q5SNV9 1468 aa11.91□□□□□ -0.5
NPIPB3-207ENST00000535190 DDX17Q92841 729 aaKnown RBP11.91□□□□□ -0.5
NPIPB3-207ENST00000535190 CCDC144AA2RUR9 1427 aa11.91□□□□□ -0.5
NPIPB3-207ENST00000535190 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
NPIPB3-207ENST00000535190 NHSL1Q5SYE7 1610 aa11.9□□□□□ -0.5
NPIPB3-207ENST00000535190 IFT172Q9UG01 1749 aa11.9□□□□□ -0.5
NPIPB3-207ENST00000535190 ANKRD30BQ9BXX2 1392 aa11.9□□□□□ -0.5
NPIPB3-207ENST00000535190 ORAI2Q96SN7 254 aa11.89□□□□□ -0.51
NPIPB3-207ENST00000535190 ABCC11Q96J66 1382 aa11.89□□□□□ -0.51
NPIPB3-207ENST00000535190 SOS2Q07890 1332 aaPredicted RBP11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 TECPR2O15040 1411 aa11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 C14orf93Q9H972 538 aaKnown RBP11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 LAMC1P11047 1609 aa11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 LRPPRCP42704 1394 aaKnown RBP11.88□□□□□ -0.51
NPIPB3-207ENST00000535190 RAB3GAP2Q9H2M9 1393 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms