RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 SLC26A8Q96RN1 970 aa25.46■■□□□ 1.67
DDB1-205ENST00000535174 ROCK1Q13464 1354 aa25.45■■□□□ 1.67
DDB1-205ENST00000535174 E9PCH4 1651 aa25.45■■□□□ 1.66
DDB1-205ENST00000535174 IQGAP3Q86VI3 1631 aa25.45■■□□□ 1.66
DDB1-205ENST00000535174 ITGAEP38570 1179 aa25.43■■□□□ 1.66
DDB1-205ENST00000535174 NWD1Q149M9 1564 aa25.43■■□□□ 1.66
DDB1-205ENST00000535174 TMEM94Q12767 1356 aa25.43■■□□□ 1.66
DDB1-205ENST00000535174 TMEM131LA2VDJ0 1609 aa25.42■■□□□ 1.66
DDB1-205ENST00000535174 PPP1R15AO75807 674 aaPredicted RBP25.42■■□□□ 1.66
DDB1-205ENST00000535174 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
DDB1-205ENST00000535174 NKTRP30414 1462 aaKnown RBP25.41■■□□□ 1.66
DDB1-205ENST00000535174 KCNA6P17658 529 aa25.41■■□□□ 1.66
DDB1-205ENST00000535174 ZFYVE9O95405 1425 aa25.4■■□□□ 1.66
DDB1-205ENST00000535174 RIMS2Q9UQ26 1411 aa25.4■■□□□ 1.66
DDB1-205ENST00000535174 CHGAP10645 457 aaKnown RBP25.39■■□□□ 1.66
DDB1-205ENST00000535174 PLEKHG1Q9ULL1 1385 aa25.37■■□□□ 1.65
DDB1-205ENST00000535174 PROSER2Q86WR7 435 aaPredicted RBP25.37■■□□□ 1.65
DDB1-205ENST00000535174 HDGFP51858 240 aaKnown RBP25.36■■□□□ 1.65
DDB1-205ENST00000535174 NUP155O75694 1391 aa25.34■■□□□ 1.65
DDB1-205ENST00000535174 RBM33Q96EV2 1170 aaKnown RBP25.34■■□□□ 1.65
DDB1-205ENST00000535174 ROBO1Q9Y6N7 1651 aa25.33■■□□□ 1.65
DDB1-205ENST00000535174 CHD2O14647 1828 aaKnown RBP25.32■■□□□ 1.64
DDB1-205ENST00000535174 FAM135BQ49AJ0 1406 aa25.31■■□□□ 1.64
DDB1-205ENST00000535174 MSH6P52701 1360 aa25.31■■□□□ 1.64
DDB1-205ENST00000535174 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.3■■□□□ 1.64
DDB1-205ENST00000535174 DIP2AQ14689 1571 aa25.29■■□□□ 1.64
DDB1-205ENST00000535174 SPHKAPQ2M3C7 1700 aa25.28■■□□□ 1.64
DDB1-205ENST00000535174 HRCP23327 699 aa25.27■■□□□ 1.64
DDB1-205ENST00000535174 NUTM2DQ5VT03 806 aaPredicted RBP25.26■■□□□ 1.63
DDB1-205ENST00000535174 TBX22Q9Y458 520 aa25.22■■□□□ 1.63
DDB1-205ENST00000535174 TRPM2O94759 1503 aa25.22■■□□□ 1.63
DDB1-205ENST00000535174 ADAMTS13Q76LX8 1427 aa25.21■■□□□ 1.63
DDB1-205ENST00000535174 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
DDB1-205ENST00000535174 PHLPP1O60346 1717 aa25.2■■□□□ 1.62
DDB1-205ENST00000535174 ZEB1P37275 1124 aaPredicted RBP25.18■■□□□ 1.62
DDB1-205ENST00000535174 PIK3R4Q99570 1358 aa25.17■■□□□ 1.62
DDB1-205ENST00000535174 SLAIN2Q9P270 581 aa25.16■■□□□ 1.62
DDB1-205ENST00000535174 SETD5Q9C0A6 1442 aa25.15■■□□□ 1.62
DDB1-205ENST00000535174 NCOA3Q9Y6Q9 1424 aa25.15■■□□□ 1.62
DDB1-205ENST00000535174 ZNF326Q5BKZ1 582 aaKnown RBP25.14■■□□□ 1.62
DDB1-205ENST00000535174 CLTCL1P53675 1640 aa25.13■■□□□ 1.61
DDB1-205ENST00000535174 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.13■■□□□ 1.61
DDB1-205ENST00000535174 NRXN3Q9Y4C0 1643 aa25.12■■□□□ 1.61
DDB1-205ENST00000535174 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
DDB1-205ENST00000535174 SETBP1Q9Y6X0 1596 aa25.11■■□□□ 1.61
DDB1-205ENST00000535174 HFM1A2PYH4 1435 aa25.11■■□□□ 1.61
DDB1-205ENST00000535174 NAIPQ13075 1403 aa25.11■■□□□ 1.61
DDB1-205ENST00000535174 KIF1BO60333 1816 aa25.09■■□□□ 1.61
DDB1-205ENST00000535174 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
DDB1-205ENST00000535174 ATF3P18847 181 aa25.08■■□□□ 1.61
DDB1-205ENST00000535174 AMOTL2Q9Y2J4 779 aa25.08■■□□□ 1.61
DDB1-205ENST00000535174 COL16A1Q07092 1604 aaPredicted RBP25.08■■□□□ 1.6
DDB1-205ENST00000535174 RAB3GAP2Q9H2M9 1393 aa25.07■■□□□ 1.6
DDB1-205ENST00000535174 PTPRUQ92729 1446 aa25.07■■□□□ 1.6
DDB1-205ENST00000535174 CADPS2Q86UW7 1296 aa25.07■■□□□ 1.6
DDB1-205ENST00000535174 JCADQ9P266 1359 aa25.06■■□□□ 1.6
DDB1-205ENST00000535174 RGS17Q9UGC6 210 aaPredicted RBP25.06■■□□□ 1.6
DDB1-205ENST00000535174 NEXMIFQ5QGS0 1516 aa25.06■■□□□ 1.6
DDB1-205ENST00000535174 C19orf44Q9H6X5 657 aa25.05■■□□□ 1.6
DDB1-205ENST00000535174 AHDC1Q5TGY3 1603 aaPredicted RBP25.02■■□□□ 1.6
DDB1-205ENST00000535174 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
DDB1-205ENST00000535174 DCCP43146 1447 aa25■■□□□ 1.59
DDB1-205ENST00000535174 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
DDB1-205ENST00000535174 METP08581 1390 aa24.98■■□□□ 1.59
DDB1-205ENST00000535174 DHX57Q6P158 1386 aaKnown RBP24.97■■□□□ 1.59
DDB1-205ENST00000535174 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
DDB1-205ENST00000535174 SHPRHQ149N8 1683 aa24.97■■□□□ 1.59
DDB1-205ENST00000535174 POTEAQ6S8J7 498 aa24.95■■□□□ 1.58
DDB1-205ENST00000535174 NALCNQ8IZF0 1738 aa24.95■■□□□ 1.58
DDB1-205ENST00000535174 ASXL1Q8IXJ9 1541 aa24.94■■□□□ 1.58
DDB1-205ENST00000535174 MEX3CQ5U5Q3 659 aaKnown RBP24.93■■□□□ 1.58
DDB1-205ENST00000535174 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
DDB1-205ENST00000535174 SPATA31A6Q5VVP1 1343 aa24.92■■□□□ 1.58
DDB1-205ENST00000535174 BRINP3Q76B58 766 aa24.92■■□□□ 1.58
DDB1-205ENST00000535174 LRP6O75581 1613 aa24.92■■□□□ 1.58
DDB1-205ENST00000535174 ADGRL3Q9HAR2 1447 aa24.92■■□□□ 1.58
DDB1-205ENST00000535174 MST1RQ04912 1400 aa24.91■■□□□ 1.58
DDB1-205ENST00000535174 NHSL1Q5SYE7 1610 aa24.9■■□□□ 1.58
DDB1-205ENST00000535174 SETD1AO15047 1707 aaKnown RBP24.89■■□□□ 1.58
DDB1-205ENST00000535174 PPLO60437 1756 aa24.89■■□□□ 1.57
DDB1-205ENST00000535174 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
DDB1-205ENST00000535174 PTCH1Q13635 1447 aa24.86■■□□□ 1.57
DDB1-205ENST00000535174 RPGRIP1LQ68CZ1 1315 aa24.84■■□□□ 1.57
DDB1-205ENST00000535174 NUTM2BA6NNL0 878 aaPredicted RBP24.81■■□□□ 1.56
DDB1-205ENST00000535174 NUTM2EB1AL46 878 aaPredicted RBP24.81■■□□□ 1.56
DDB1-205ENST00000535174 NUTM2AQ8IVF1 878 aaPredicted RBP24.81■■□□□ 1.56
DDB1-205ENST00000535174 CCDC144AA2RUR9 1427 aa24.8■■□□□ 1.56
DDB1-205ENST00000535174 FOXD1Q16676 465 aa24.8■■□□□ 1.56
DDB1-205ENST00000535174 ZNF772Q68DY9 489 aaPredicted RBP24.79■■□□□ 1.56
DDB1-205ENST00000535174 ROBO2Q9HCK4 1378 aa24.79■■□□□ 1.56
DDB1-205ENST00000535174 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
DDB1-205ENST00000535174 PRAG1Q86YV5 1406 aa24.76■■□□□ 1.55
DDB1-205ENST00000535174 DDX17Q92841 729 aaKnown RBP24.75■■□□□ 1.55
DDB1-205ENST00000535174 LRRC59Q96AG4 307 aaKnown RBP24.75■■□□□ 1.55
DDB1-205ENST00000535174 IFT172Q9UG01 1749 aa24.74■■□□□ 1.55
DDB1-205ENST00000535174 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
DDB1-205ENST00000535174 RGL3Q3MIN7 710 aa24.7■■□□□ 1.54
DDB1-205ENST00000535174 LAMC1P11047 1609 aa24.7■■□□□ 1.54
DDB1-205ENST00000535174 CDC42BPGQ6DT37 1551 aa24.7■■□□□ 1.54
DDB1-205ENST00000535174 MPHOSPH9Q99550 1183 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms