RNA–Protein interactions for RNA: ENST00000535021.5

LPCAT3-202, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-202ENST00000535021 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
LPCAT3-202ENST00000535021 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
LPCAT3-202ENST00000535021 MYO5BQ9ULV0 1848 aa12.73□□□□□ -0.37
LPCAT3-202ENST00000535021 PPLO60437 1756 aa12.73□□□□□ -0.37
LPCAT3-202ENST00000535021 MYOM2P54296 1465 aa12.72□□□□□ -0.37
LPCAT3-202ENST00000535021 NLRP1Q9C000 1473 aa12.72□□□□□ -0.37
LPCAT3-202ENST00000535021 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
LPCAT3-202ENST00000535021 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
LPCAT3-202ENST00000535021 PRAG1Q86YV5 1406 aa12.71□□□□□ -0.37
LPCAT3-202ENST00000535021 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
LPCAT3-202ENST00000535021 NBPF8Q3BBV2 869 aa12.71□□□□□ -0.37
LPCAT3-202ENST00000535021 NEXMIFQ5QGS0 1516 aa12.71□□□□□ -0.38
LPCAT3-202ENST00000535021 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
LPCAT3-202ENST00000535021 RPGRIP1LQ68CZ1 1315 aa12.7□□□□□ -0.38
LPCAT3-202ENST00000535021 A2ML1A8K2U0 1454 aa12.7□□□□□ -0.38
LPCAT3-202ENST00000535021 UBR1Q8IWV7 1749 aa12.69□□□□□ -0.38
LPCAT3-202ENST00000535021 CHGAP10645 457 aaKnown RBP12.69□□□□□ -0.38
LPCAT3-202ENST00000535021 PTPRMP28827 1452 aa12.69□□□□□ -0.38
LPCAT3-202ENST00000535021 RALGAPBQ86X10 1494 aa12.69□□□□□ -0.38
LPCAT3-202ENST00000535021 NRXN1Q9ULB1 1477 aa12.69□□□□□ -0.38
LPCAT3-202ENST00000535021 TRPM1Q7Z4N2 1603 aa12.69□□□□□ -0.38
LPCAT3-202ENST00000535021 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
LPCAT3-202ENST00000535021 ZNF326Q5BKZ1 582 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-202ENST00000535021 ZFYVE9O95405 1425 aa12.67□□□□□ -0.38
LPCAT3-202ENST00000535021 KIAA1210Q9ULL0 1709 aa12.67□□□□□ -0.38
LPCAT3-202ENST00000535021 ZNF142P52746 1687 aaPredicted RBP12.67□□□□□ -0.38
LPCAT3-202ENST00000535021 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
LPCAT3-202ENST00000535021 CEP170BQ9Y4F5 1589 aaPredicted RBP12.65□□□□□ -0.38
LPCAT3-202ENST00000535021 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
LPCAT3-202ENST00000535021 LAMC1P11047 1609 aa12.65□□□□□ -0.38
LPCAT3-202ENST00000535021 PIK3C2GO75747 1445 aa12.64□□□□□ -0.39
LPCAT3-202ENST00000535021 GPRASP1Q5JY77 1395 aa12.64□□□□□ -0.39
LPCAT3-202ENST00000535021 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
LPCAT3-202ENST00000535021 RIMS2Q9UQ26 1411 aa12.63□□□□□ -0.39
LPCAT3-202ENST00000535021 ARHGAP23Q9P227 1491 aa12.62□□□□□ -0.39
LPCAT3-202ENST00000535021 TMEM2Q9UHN6 1383 aa12.62□□□□□ -0.39
LPCAT3-202ENST00000535021 VGFO15240 615 aaPredicted RBP12.62□□□□□ -0.39
LPCAT3-202ENST00000535021 SLIT1O75093 1534 aa12.62□□□□□ -0.39
LPCAT3-202ENST00000535021 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
LPCAT3-202ENST00000535021 ROCK2O75116 1388 aaKnown RBP12.6□□□□□ -0.39
LPCAT3-202ENST00000535021 SETBP1Q9Y6X0 1596 aa12.6□□□□□ -0.39
LPCAT3-202ENST00000535021 C1QBPQ07021 282 aaKnown RBP12.59□□□□□ -0.39
LPCAT3-202ENST00000535021 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.59□□□□□ -0.39
LPCAT3-202ENST00000535021 ADGRB1O14514 1584 aa12.58□□□□□ -0.4
LPCAT3-202ENST00000535021 NBPF1Q3BBV0 1214 aa12.58□□□□□ -0.4
LPCAT3-202ENST00000535021 NUTM2DQ5VT03 806 aaPredicted RBP12.58□□□□□ -0.4
LPCAT3-202ENST00000535021 C14orf93Q9H972 538 aaKnown RBP12.58□□□□□ -0.4
LPCAT3-202ENST00000535021 NRXN3Q9Y4C0 1643 aa12.58□□□□□ -0.4
LPCAT3-202ENST00000535021 IQGAP1P46940 1657 aa12.57□□□□□ -0.4
LPCAT3-202ENST00000535021 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
LPCAT3-202ENST00000535021 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
LPCAT3-202ENST00000535021 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
LPCAT3-202ENST00000535021 CARD11Q9BXL7 1154 aa12.57□□□□□ -0.4
LPCAT3-202ENST00000535021 SETD1AO15047 1707 aaKnown RBP12.57□□□□□ -0.4
LPCAT3-202ENST00000535021 USP47Q96K76 1375 aa12.56□□□□□ -0.4
LPCAT3-202ENST00000535021 EIF4G2P78344 907 aaKnown RBP eCLIP12.56□□□□□ -0.4
LPCAT3-202ENST00000535021 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
LPCAT3-202ENST00000535021 ALKQ9UM73 1620 aa12.55□□□□□ -0.4
LPCAT3-202ENST00000535021 HSPA5P11021 654 aaKnown RBP12.55□□□□□ -0.4
LPCAT3-202ENST00000535021 ASXL1Q8IXJ9 1541 aa12.55□□□□□ -0.4
LPCAT3-202ENST00000535021 PLEKHG1Q9ULL1 1385 aa12.55□□□□□ -0.4
LPCAT3-202ENST00000535021 SCAF11Q99590 1463 aaKnown RBP12.54□□□□□ -0.4
LPCAT3-202ENST00000535021 LTKP29376 864 aa12.53□□□□□ -0.4
LPCAT3-202ENST00000535021 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
LPCAT3-202ENST00000535021 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
LPCAT3-202ENST00000535021 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
LPCAT3-202ENST00000535021 MED14O60244 1454 aa12.51□□□□□ -0.41
LPCAT3-202ENST00000535021 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
LPCAT3-202ENST00000535021 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
LPCAT3-202ENST00000535021 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
LPCAT3-202ENST00000535021 DIP2AQ14689 1571 aa12.5□□□□□ -0.41
LPCAT3-202ENST00000535021 ARHGEF28Q8N1W1 1705 aaKnown RBP12.49□□□□□ -0.41
LPCAT3-202ENST00000535021 LMTK3Q96Q04 1460 aa12.48□□□□□ -0.41
LPCAT3-202ENST00000535021 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
LPCAT3-202ENST00000535021 ST20-MTHFSA0A0A6YYL1 179 aa12.48□□□□□ -0.41
LPCAT3-202ENST00000535021 TMEM132EQ6IEE7 984 aa12.48□□□□□ -0.41
LPCAT3-202ENST00000535021 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
LPCAT3-202ENST00000535021 KNDC1Q76NI1 1749 aa12.48□□□□□ -0.41
LPCAT3-202ENST00000535021 DLC1Q96QB1 1528 aa12.47□□□□□ -0.41
LPCAT3-202ENST00000535021 LRPPRCP42704 1394 aaKnown RBP12.46□□□□□ -0.41
LPCAT3-202ENST00000535021 TECPR2O15040 1411 aa12.45□□□□□ -0.42
LPCAT3-202ENST00000535021 METP08581 1390 aa12.45□□□□□ -0.42
LPCAT3-202ENST00000535021 TESK2Q96S53 571 aa12.45□□□□□ -0.42
LPCAT3-202ENST00000535021 TBX22Q9Y458 520 aa12.45□□□□□ -0.42
LPCAT3-202ENST00000535021 NPHP4O75161 1426 aaPredicted RBP12.45□□□□□ -0.42
LPCAT3-202ENST00000535021 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
LPCAT3-202ENST00000535021 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
LPCAT3-202ENST00000535021 SBNO2Q9Y2G9 1366 aa12.44□□□□□ -0.42
LPCAT3-202ENST00000535021 CPS1P31327 1500 aa12.44□□□□□ -0.42
LPCAT3-202ENST00000535021 BCANQ96GW7 911 aa12.44□□□□□ -0.42
LPCAT3-202ENST00000535021 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
LPCAT3-202ENST00000535021 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
LPCAT3-202ENST00000535021 C11orf95C9JLR9 678 aaPredicted RBP12.43□□□□□ -0.42
LPCAT3-202ENST00000535021 CCDC7Q96M83 1385 aa12.43□□□□□ -0.42
LPCAT3-202ENST00000535021 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
LPCAT3-202ENST00000535021 WASHC2AQ641Q2 1341 aa12.42□□□□□ -0.42
LPCAT3-202ENST00000535021 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
LPCAT3-202ENST00000535021 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
LPCAT3-202ENST00000535021 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
LPCAT3-202ENST00000535021 PTPRUQ92729 1446 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms