RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PPP1R15AO75807 674 aaPredicted RBP17.61■□□□□ 0.41
SCARB1-204ENST00000535005 DCAF11Q8TEB1 546 aa17.61■□□□□ 0.41
SCARB1-204ENST00000535005 TMEM2Q9UHN6 1383 aa17.61■□□□□ 0.41
SCARB1-204ENST00000535005 MYO5BQ9ULV0 1848 aa17.61■□□□□ 0.41
SCARB1-204ENST00000535005 ZFYVE9O95405 1425 aa17.6■□□□□ 0.41
SCARB1-204ENST00000535005 NEXMIFQ5QGS0 1516 aa17.6■□□□□ 0.41
SCARB1-204ENST00000535005 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
SCARB1-204ENST00000535005 SLIT1O75093 1534 aa17.59■□□□□ 0.41
SCARB1-204ENST00000535005 IFT172Q9UG01 1749 aa17.59■□□□□ 0.41
SCARB1-204ENST00000535005 MYOM2P54296 1465 aa17.59■□□□□ 0.41
SCARB1-204ENST00000535005 HDGFP51858 240 aaKnown RBP17.58■□□□□ 0.41
SCARB1-204ENST00000535005 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.58■□□□□ 0.41
SCARB1-204ENST00000535005 RIMS2Q9UQ26 1411 aa17.58■□□□□ 0.41
SCARB1-204ENST00000535005 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-204ENST00000535005 PPLO60437 1756 aa17.57■□□□□ 0.4
SCARB1-204ENST00000535005 KDM2AQ9Y2K7 1162 aa17.56■□□□□ 0.4
SCARB1-204ENST00000535005 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
SCARB1-204ENST00000535005 PRAG1Q86YV5 1406 aa17.54■□□□□ 0.4
SCARB1-204ENST00000535005 ADGRF5Q8IZF2 1346 aa17.54■□□□□ 0.4
SCARB1-204ENST00000535005 LMTK3Q96Q04 1460 aa17.54■□□□□ 0.4
SCARB1-204ENST00000535005 EID1Q9Y6B2 187 aa17.53■□□□□ 0.4
SCARB1-204ENST00000535005 LTKP29376 864 aa17.52■□□□□ 0.4
SCARB1-204ENST00000535005 NBPF8Q3BBV2 869 aa17.52■□□□□ 0.4
SCARB1-204ENST00000535005 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
SCARB1-204ENST00000535005 ANKLE2Q86XL3 938 aa17.51■□□□□ 0.39
SCARB1-204ENST00000535005 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
SCARB1-204ENST00000535005 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
SCARB1-204ENST00000535005 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
SCARB1-204ENST00000535005 PLEKHG1Q9ULL1 1385 aa17.49■□□□□ 0.39
SCARB1-204ENST00000535005 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
SCARB1-204ENST00000535005 C14orf93Q9H972 538 aaKnown RBP17.47■□□□□ 0.39
SCARB1-204ENST00000535005 SETBP1Q9Y6X0 1596 aa17.46■□□□□ 0.39
SCARB1-204ENST00000535005 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
SCARB1-204ENST00000535005 MED14O60244 1454 aa17.45■□□□□ 0.38
SCARB1-204ENST00000535005 RALGAPBQ86X10 1494 aa17.45■□□□□ 0.38
SCARB1-204ENST00000535005 HSPA2P54652 639 aa17.44■□□□□ 0.38
SCARB1-204ENST00000535005 CFAP70Q5T0N1 1121 aa17.44■□□□□ 0.38
SCARB1-204ENST00000535005 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
SCARB1-204ENST00000535005 GPRASP1Q5JY77 1395 aa17.43■□□□□ 0.38
SCARB1-204ENST00000535005 LAMC1P11047 1609 aa17.43■□□□□ 0.38
SCARB1-204ENST00000535005 ADAMTS13Q76LX8 1427 aa17.42■□□□□ 0.38
SCARB1-204ENST00000535005 NRXN3Q9Y4C0 1643 aa17.42■□□□□ 0.38
SCARB1-204ENST00000535005 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
SCARB1-204ENST00000535005 ALKQ9UM73 1620 aa17.41■□□□□ 0.38
SCARB1-204ENST00000535005 POLR1AO95602 1720 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-204ENST00000535005 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
SCARB1-204ENST00000535005 TBX22Q9Y458 520 aa17.41■□□□□ 0.38
SCARB1-204ENST00000535005 NPHP4O75161 1426 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-204ENST00000535005 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
SCARB1-204ENST00000535005 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.38
SCARB1-204ENST00000535005 IQGAP1P46940 1657 aa17.39■□□□□ 0.37
SCARB1-204ENST00000535005 BCANQ96GW7 911 aa17.39■□□□□ 0.37
SCARB1-204ENST00000535005 DIP2AQ14689 1571 aa17.39■□□□□ 0.37
SCARB1-204ENST00000535005 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
SCARB1-204ENST00000535005 ADGRB1O14514 1584 aa17.38■□□□□ 0.37
SCARB1-204ENST00000535005 SETD1AO15047 1707 aaKnown RBP17.38■□□□□ 0.37
SCARB1-204ENST00000535005 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
SCARB1-204ENST00000535005 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
SCARB1-204ENST00000535005 STRCQ7RTU9 1775 aa17.36■□□□□ 0.37
SCARB1-204ENST00000535005 PIK3R4Q99570 1358 aa17.36■□□□□ 0.37
SCARB1-204ENST00000535005 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
SCARB1-204ENST00000535005 ASXL1Q8IXJ9 1541 aa17.35■□□□□ 0.37
SCARB1-204ENST00000535005 METP08581 1390 aa17.35■□□□□ 0.37
SCARB1-204ENST00000535005 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
SCARB1-204ENST00000535005 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
SCARB1-204ENST00000535005 YTHDC2Q9H6S0 1430 aaKnown RBP17.32■□□□□ 0.36
SCARB1-204ENST00000535005 DMRT2Q9Y5R5 561 aa17.32■□□□□ 0.36
SCARB1-204ENST00000535005 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
SCARB1-204ENST00000535005 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
SCARB1-204ENST00000535005 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.362e-9■■■■□ 23.9
SCARB1-204ENST00000535005 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
SCARB1-204ENST00000535005 USP47Q96K76 1375 aa17.29■□□□□ 0.36
SCARB1-204ENST00000535005 TECPR2O15040 1411 aa17.29■□□□□ 0.36
SCARB1-204ENST00000535005 PTPRUQ92729 1446 aa17.28■□□□□ 0.36
SCARB1-204ENST00000535005 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
SCARB1-204ENST00000535005 STK26Q9P289 416 aa17.26■□□□□ 0.35
SCARB1-204ENST00000535005 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
SCARB1-204ENST00000535005 AMOTL2Q9Y2J4 779 aa17.26■□□□□ 0.35
SCARB1-204ENST00000535005 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
SCARB1-204ENST00000535005 HSPA5P11021 654 aaKnown RBP17.26■□□□□ 0.35
SCARB1-204ENST00000535005 KCNA6P17658 529 aa17.26■□□□□ 0.35
SCARB1-204ENST00000535005 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
SCARB1-204ENST00000535005 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
SCARB1-204ENST00000535005 FAM135BQ49AJ0 1406 aa17.25■□□□□ 0.35
SCARB1-204ENST00000535005 XRN1Q8IZH2 1706 aaKnown RBP17.24■□□□□ 0.35
SCARB1-204ENST00000535005 CPS1P31327 1500 aa17.24■□□□□ 0.35
SCARB1-204ENST00000535005 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
SCARB1-204ENST00000535005 ST20-MTHFSA0A0A6YYL1 179 aa17.23■□□□□ 0.35
SCARB1-204ENST00000535005 PTCH1Q13635 1447 aa17.23■□□□□ 0.35
SCARB1-204ENST00000535005 CENPJQ9HC77 1338 aaPredicted RBP17.22■□□□□ 0.35
SCARB1-204ENST00000535005 ARHGEF28Q8N1W1 1705 aaKnown RBP17.22■□□□□ 0.35
SCARB1-204ENST00000535005 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
SCARB1-204ENST00000535005 SBNO2Q9Y2G9 1366 aa17.21■□□□□ 0.34
SCARB1-204ENST00000535005 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
SCARB1-204ENST00000535005 TESK2Q96S53 571 aa17.2■□□□□ 0.34
SCARB1-204ENST00000535005 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
SCARB1-204ENST00000535005 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
SCARB1-204ENST00000535005 POGKQ9P215 609 aa17.19■□□□□ 0.34
SCARB1-204ENST00000535005 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
SCARB1-204ENST00000535005 PLEKHH1Q9ULM0 1364 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms