RNA–Protein interactions for RNA: ENST00000534582.5

APLP2-224, Transcript of amyloid beta precursor like protein 2, human

TSL 5

Gene APLP2, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APLP2-224	ENST00000534582	MED1	Q15648	1581 aa	Predicted RBP	32.2	■■■□□ 2.75
APLP2-224	ENST00000534582	ITGAE	P38570	1179 aa		32.2	■■■□□ 2.75
APLP2-224	ENST00000534582	RIMS2	Q9UQ26	1411 aa		32.18	■■■□□ 2.74
APLP2-224	ENST00000534582	KCNA6	P17658	529 aa		32.18	■■■□□ 2.74
APLP2-224	ENST00000534582	RRBP1	Q9P2E9	1410 aa	Known RBP	32.17	■■■□□ 2.74
APLP2-224	ENST00000534582	TMEM94	Q12767	1356 aa		32.17	■■■□□ 2.74
APLP2-224	ENST00000534582	NUP155	O75694	1391 aa		32.16	■■■□□ 2.74
APLP2-224	ENST00000534582	PLEKHG1	Q9ULL1	1385 aa		32.16	■■■□□ 2.74
APLP2-224	ENST00000534582	NKTR	P30414	1462 aa	Known RBP	32.12	■■■□□ 2.73
APLP2-224	ENST00000534582	SOCS7	O14512	581 aa		32.12	■■■□□ 2.73
APLP2-224	ENST00000534582	RBM33	Q96EV2	1170 aa	Known RBP	32.1	■■■□□ 2.73
APLP2-224	ENST00000534582	SENP3	Q9H4L4	574 aa	Predicted RBP	32.09	■■■□□ 2.73
APLP2-224	ENST00000534582	CHD2	O14647	1828 aa	Known RBP	32.09	■■■□□ 2.73
APLP2-224	ENST00000534582	ADAMTS13	Q76LX8	1427 aa		32.09	■■■□□ 2.73
APLP2-224	ENST00000534582	NAIP	Q13075	1403 aa		32.03	■■■□□ 2.72
APLP2-224	ENST00000534582	FAM135B	Q49AJ0	1406 aa		32.03	■■■□□ 2.72
APLP2-224	ENST00000534582	PROSER2	Q86WR7	435 aa	Predicted RBP	32.03	■■■□□ 2.72
APLP2-224	ENST00000534582	SPHKAP	Q2M3C7	1700 aa		32.02	■■■□□ 2.72
APLP2-224	ENST00000534582	CHGA	P10645	457 aa	Known RBP	32.01	■■■□□ 2.71
APLP2-224	ENST00000534582	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.01	■■■□□ 2.71
APLP2-224	ENST00000534582	TBX22	Q9Y458	520 aa		32	■■■□□ 2.71
APLP2-224	ENST00000534582	PPP1R15A	O75807	674 aa	Predicted RBP	31.98	■■■□□ 2.71
APLP2-224	ENST00000534582	BCAN	Q96GW7	911 aa		31.97	■■■□□ 2.71
APLP2-224	ENST00000534582	DIP2A	Q14689	1571 aa		31.97	■■■□□ 2.71
APLP2-224	ENST00000534582	ROBO1	Q9Y6N7	1651 aa		31.96	■■■□□ 2.71
APLP2-224	ENST00000534582	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.96	■■■□□ 2.71
APLP2-224	ENST00000534582	NRXN3	Q9Y4C0	1643 aa		31.96	■■■□□ 2.71
APLP2-224	ENST00000534582	HDGF	P51858	240 aa	Known RBP	31.94	■■■□□ 2.7
APLP2-224	ENST00000534582	CLTCL1	P53675	1640 aa		31.93	■■■□□ 2.7
APLP2-224	ENST00000534582	PTPRU	Q92729	1446 aa		31.92	■■■□□ 2.7
APLP2-224	ENST00000534582	TRPM2	O94759	1503 aa		31.9	■■■□□ 2.7
APLP2-224	ENST00000534582	HFM1	A2PYH4	1435 aa		31.89	■■■□□ 2.7
APLP2-224	ENST00000534582	MSH6	P52701	1360 aa		31.88	■■■□□ 2.69
APLP2-224	ENST00000534582	PIK3R4	Q99570	1358 aa		31.88	■■■□□ 2.69
APLP2-224	ENST00000534582	SETBP1	Q9Y6X0	1596 aa		31.88	■■■□□ 2.69
APLP2-224	ENST00000534582	NCOA3	Q9Y6Q9	1424 aa		31.85	■■■□□ 2.69
APLP2-224	ENST00000534582	NEXMIF	Q5QGS0	1516 aa		31.84	■■■□□ 2.69
APLP2-224	ENST00000534582	XRN1	Q8IZH2	1706 aa	Known RBP	31.83	■■■□□ 2.69
APLP2-224	ENST00000534582	SLAIN2	Q9P270	581 aa		31.81	■■■□□ 2.68
APLP2-224	ENST00000534582	RGS17	Q9UGC6	210 aa	Predicted RBP	31.81	■■■□□ 2.68
APLP2-224	ENST00000534582	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.8	■■■□□ 2.68
APLP2-224	ENST00000534582	AMOTL2	Q9Y2J4	779 aa		31.77	■■■□□ 2.68
APLP2-224	ENST00000534582	MET	P08581	1390 aa		31.76	■■■□□ 2.67
APLP2-224	ENST00000534582	PHF23	Q9BUL5	403 aa	Predicted RBP	31.74	■■■□□ 2.67
APLP2-224	ENST00000534582	COL16A1	Q07092	1604 aa	Predicted RBP	31.74	■■■□□ 2.67
APLP2-224	ENST00000534582	PHLPP1	O60346	1717 aa		31.73	■■■□□ 2.67
APLP2-224	ENST00000534582	KIF1B	O60333	1816 aa		31.72	■■■□□ 2.67
APLP2-224	ENST00000534582	ZNF326	Q5BKZ1	582 aa	Known RBP	31.71	■■■□□ 2.67
APLP2-224	ENST00000534582	C19orf44	Q9H6X5	657 aa		31.7	■■■□□ 2.67
APLP2-224	ENST00000534582	SETD1A	O15047	1707 aa	Known RBP	31.69	■■■□□ 2.66
APLP2-224	ENST00000534582	TRIM52	Q96A61	297 aa		31.66	■■■□□ 2.66
APLP2-224	ENST00000534582	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.66	■■■□□ 2.66
APLP2-224	ENST00000534582	CADPS2	Q86UW7	1296 aa		31.64	■■■□□ 2.66
APLP2-224	ENST00000534582	DCC	P43146	1447 aa		31.64	■■■□□ 2.66
APLP2-224	ENST00000534582	C14orf37	Q86TY3	774 aa		31.63	■■■□□ 2.65
APLP2-224	ENST00000534582	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.62	■■■□□ 2.65
APLP2-224	ENST00000534582	JCAD	Q9P266	1359 aa		31.6	■■■□□ 2.65
APLP2-224	ENST00000534582	MST1R	Q04912	1400 aa		31.59	■■■□□ 2.65
APLP2-224	ENST00000534582	FOXD1	Q16676	465 aa		31.59	■■■□□ 2.65
APLP2-224	ENST00000534582	ATF3	P18847	181 aa		31.58	■■■□□ 2.65
APLP2-224	ENST00000534582	PPL	O60437	1756 aa		31.58	■■■□□ 2.65
APLP2-224	ENST00000534582	NALCN	Q8IZF0	1738 aa		31.58	■■■□□ 2.65
APLP2-224	ENST00000534582	POTEA	Q6S8J7	498 aa		31.57	■■■□□ 2.64
APLP2-224	ENST00000534582	BRINP3	Q76B58	766 aa		31.57	■■■□□ 2.64
APLP2-224	ENST00000534582	LRP6	O75581	1613 aa		31.57	■■■□□ 2.64
APLP2-224	ENST00000534582	ADGRL3	Q9HAR2	1447 aa		31.56	■■■□□ 2.64
APLP2-224	ENST00000534582	PRAG1	Q86YV5	1406 aa		31.54	■■■□□ 2.64
APLP2-224	ENST00000534582	ASXL1	Q8IXJ9	1541 aa		31.54	■■■□□ 2.64
APLP2-224	ENST00000534582	SHPRH	Q149N8	1683 aa		31.51	■■■□□ 2.64
APLP2-224	ENST00000534582	PTCH1	Q13635	1447 aa		31.51	■■■□□ 2.64
APLP2-224	ENST00000534582	RPGRIP1L	Q68CZ1	1315 aa		31.5	■■■□□ 2.63
APLP2-224	ENST00000534582	ROBO2	Q9HCK4	1378 aa		31.5	■■■□□ 2.63
APLP2-224	ENST00000534582	SPATA31E1	Q6ZUB1	1445 aa		31.49	■■■□□ 2.63
APLP2-224	ENST00000534582	NHSL1	Q5SYE7	1610 aa		31.49	■■■□□ 2.63
APLP2-224	ENST00000534582	VGF	O15240	615 aa	Predicted RBP	31.49	■■■□□ 2.63
APLP2-224	ENST00000534582	MPHOSPH9	Q99550	1183 aa		31.45	■■■□□ 2.63
APLP2-224	ENST00000534582	IFT172	Q9UG01	1749 aa		31.44	■■■□□ 2.62
APLP2-224	ENST00000534582	SPATA31A6	Q5VVP1	1343 aa		31.43	■■■□□ 2.62
APLP2-224	ENST00000534582	SETD5	Q9C0A6	1442 aa		31.42	■■■□□ 2.62
APLP2-224	ENST00000534582	ADGRF5	Q8IZF2	1346 aa		31.42	■■■□□ 2.62
APLP2-224	ENST00000534582	CCDC144A	A2RUR9	1427 aa		31.41	■■■□□ 2.62
APLP2-224	ENST00000534582	C1orf167	Q5SNV9	1468 aa		31.4	■■■□□ 2.62
APLP2-224	ENST00000534582	DDX17	Q92841	729 aa	Known RBP	31.39	■■■□□ 2.62
APLP2-224	ENST00000534582	LAMC1	P11047	1609 aa		31.37	■■■□□ 2.61
APLP2-224	ENST00000534582	RGL3	Q3MIN7	710 aa		31.31	■■■□□ 2.6
APLP2-224	ENST00000534582	TECPR2	O15040	1411 aa		31.31	■■■□□ 2.6
APLP2-224	ENST00000534582	PIK3C2G	O75747	1445 aa		31.31	■■■□□ 2.6
APLP2-224	ENST00000534582	ANKRD30B	Q9BXX2	1392 aa		31.3	■■■□□ 2.6
APLP2-224	ENST00000534582	PNPLA6	Q8IY17	1366 aa		31.29	■■■□□ 2.6
APLP2-224	ENST00000534582	ORAI2	Q96SN7	254 aa		31.27	■■■□□ 2.6
APLP2-224	ENST00000534582	CDC42BPG	Q6DT37	1551 aa		31.26	■■■□□ 2.6
APLP2-224	ENST00000534582	RAB3GAP2	Q9H2M9	1393 aa		31.26	■■■□□ 2.59
APLP2-224	ENST00000534582	KNDC1	Q76NI1	1749 aa		31.24	■■■□□ 2.59
APLP2-224	ENST00000534582	LRPPRC	P42704	1394 aa	Known RBP	31.24	■■■□□ 2.59
APLP2-224	ENST00000534582	NRXN1	Q9ULB1	1477 aa		31.24	■■■□□ 2.59
APLP2-224	ENST00000534582	LRRC59	Q96AG4	307 aa	Known RBP	31.23	■■■□□ 2.59
APLP2-224	ENST00000534582	PLEKHH1	Q9ULM0	1364 aa		31.22	■■■□□ 2.59
APLP2-224	ENST00000534582	SOS2	Q07890	1332 aa	Predicted RBP	31.22	■■■□□ 2.59
APLP2-224	ENST00000534582	ABCC11	Q96J66	1382 aa		31.21	■■■□□ 2.59
APLP2-224	ENST00000534582	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.21	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms