RNA–Protein interactions for RNA: ENST00000534581.1

C11orf49-222, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 3

Gene C11orf49, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-222ENST00000534581 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
C11orf49-222ENST00000534581 RPGRIP1LQ68CZ1 1315 aa24.73■■□□□ 1.55
C11orf49-222ENST00000534581 ARHGAP23Q9P227 1491 aa24.72■■□□□ 1.55
C11orf49-222ENST00000534581 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
C11orf49-222ENST00000534581 SLIT1O75093 1534 aa24.71■■□□□ 1.55
C11orf49-222ENST00000534581 SCAF11Q99590 1463 aaKnown RBP24.71■■□□□ 1.55
C11orf49-222ENST00000534581 SPATA31E1Q6ZUB1 1445 aa24.71■■□□□ 1.55
C11orf49-222ENST00000534581 KDM5AP29375 1690 aaKnown RBP24.71■■□□□ 1.55
C11orf49-222ENST00000534581 ZFYVE9O95405 1425 aa24.69■■□□□ 1.54
C11orf49-222ENST00000534581 KIF1BO60333 1816 aa24.68■■□□□ 1.54
C11orf49-222ENST00000534581 VGFO15240 615 aaPredicted RBP24.68■■□□□ 1.54
C11orf49-222ENST00000534581 NPHP4O75161 1426 aaPredicted RBP24.67■■□□□ 1.54
C11orf49-222ENST00000534581 KDM2AQ9Y2K7 1162 aa24.66■■□□□ 1.54
C11orf49-222ENST00000534581 DCAF11Q8TEB1 546 aa24.65■■□□□ 1.54
C11orf49-222ENST00000534581 CLSPNQ9HAW4 1339 aa24.63■■□□□ 1.53
C11orf49-222ENST00000534581 MYO5BQ9ULV0 1848 aa24.62■■□□□ 1.53
C11orf49-222ENST00000534581 PLEKHG1Q9ULL1 1385 aa24.62■■□□□ 1.53
C11orf49-222ENST00000534581 SLC26A8Q96RN1 970 aa24.61■■□□□ 1.53
C11orf49-222ENST00000534581 NEXMIFQ5QGS0 1516 aa24.61■■□□□ 1.53
C11orf49-222ENST00000534581 NEURL4Q96JN8 1562 aa24.6■■□□□ 1.53
C11orf49-222ENST00000534581 TONSLQ96HA7 1378 aa24.6■■□□□ 1.53
C11orf49-222ENST00000534581 MED14O60244 1454 aa24.59■■□□□ 1.53
C11orf49-222ENST00000534581 ADGRF5Q8IZF2 1346 aa24.59■■□□□ 1.53
C11orf49-222ENST00000534581 STRCQ7RTU9 1775 aa24.58■■□□□ 1.53
C11orf49-222ENST00000534581 L3MBTL2Q969R5 705 aa24.58■■□□□ 1.53
C11orf49-222ENST00000534581 STAC3Q96MF2 364 aa24.56■■□□□ 1.52
C11orf49-222ENST00000534581 POLR1AO95602 1720 aaPredicted RBP24.55■■□□□ 1.52
C11orf49-222ENST00000534581 TBX22Q9Y458 520 aa24.52■■□□□ 1.52
C11orf49-222ENST00000534581 IQGAP1P46940 1657 aa24.52■■□□□ 1.52
C11orf49-222ENST00000534581 MYOM2P54296 1465 aa24.5■■□□□ 1.51
C11orf49-222ENST00000534581 PPLO60437 1756 aa24.48■■□□□ 1.51
C11orf49-222ENST00000534581 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
C11orf49-222ENST00000534581 ZNF335Q9H4Z2 1342 aaPredicted RBP24.46■■□□□ 1.51
C11orf49-222ENST00000534581 PIK3C2GO75747 1445 aa24.45■■□□□ 1.51
C11orf49-222ENST00000534581 CFAP70Q5T0N1 1121 aa24.45■■□□□ 1.5
C11orf49-222ENST00000534581 SETBP1Q9Y6X0 1596 aa24.44■■□□□ 1.5
C11orf49-222ENST00000534581 C14orf93Q9H972 538 aaKnown RBP24.43■■□□□ 1.5
C11orf49-222ENST00000534581 TIMELESSQ9UNS1 1208 aa24.43■■□□□ 1.5
C11orf49-222ENST00000534581 NRXN1Q9ULB1 1477 aa24.42■■□□□ 1.5
C11orf49-222ENST00000534581 METP08581 1390 aa24.42■■□□□ 1.5
C11orf49-222ENST00000534581 IFT172Q9UG01 1749 aa24.41■■□□□ 1.5
C11orf49-222ENST00000534581 KCNA6P17658 529 aa24.41■■□□□ 1.5
C11orf49-222ENST00000534581 TMEM132EQ6IEE7 984 aa24.4■■□□□ 1.5
C11orf49-222ENST00000534581 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
C11orf49-222ENST00000534581 PRAG1Q86YV5 1406 aa24.39■■□□□ 1.5
C11orf49-222ENST00000534581 AMOTL2Q9Y2J4 779 aa24.39■■□□□ 1.49
C11orf49-222ENST00000534581 PIK3R4Q99570 1358 aa24.39■■□□□ 1.49
C11orf49-222ENST00000534581 ALKQ9UM73 1620 aa24.39■■□□□ 1.49
C11orf49-222ENST00000534581 STK26Q9P289 416 aa24.38■■□□□ 1.49
C11orf49-222ENST00000534581 NRXN3Q9Y4C0 1643 aa24.37■■□□□ 1.49
C11orf49-222ENST00000534581 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
C11orf49-222ENST00000534581 PROSER2Q86WR7 435 aaPredicted RBP24.34■■□□□ 1.49
C11orf49-222ENST00000534581 PTPRUQ92729 1446 aa24.32■■□□□ 1.48
C11orf49-222ENST00000534581 NBPF1Q3BBV0 1214 aa24.31■■□□□ 1.48
C11orf49-222ENST00000534581 RBM33Q96EV2 1170 aaKnown RBP24.29■■□□□ 1.48
C11orf49-222ENST00000534581 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
C11orf49-222ENST00000534581 LRPPRCP42704 1394 aaKnown RBP24.29■■□□□ 1.48
C11orf49-222ENST00000534581 C14orf37Q86TY3 774 aa24.28■■□□□ 1.48
C11orf49-222ENST00000534581 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
C11orf49-222ENST00000534581 CPS1P31327 1500 aa24.27■■□□□ 1.48
C11orf49-222ENST00000534581 TRAK1Q9UPV9 953 aa24.27■■□□□ 1.48
C11orf49-222ENST00000534581 LAMC1P11047 1609 aa24.26■■□□□ 1.47
C11orf49-222ENST00000534581 CERKQ8TCT0 537 aa24.25■■□□□ 1.47
C11orf49-222ENST00000534581 NKTRP30414 1462 aaKnown RBP24.25■■□□□ 1.47
C11orf49-222ENST00000534581 LTBP4Q8N2S1 1624 aa24.24■■□□□ 1.47
C11orf49-222ENST00000534581 TMEM94Q12767 1356 aa24.24■■□□□ 1.47
C11orf49-222ENST00000534581 ABCC11Q96J66 1382 aa24.24■■□□□ 1.47
C11orf49-222ENST00000534581 ASXL1Q8IXJ9 1541 aa24.24■■□□□ 1.47
C11orf49-222ENST00000534581 CARD11Q9BXL7 1154 aa24.23■■□□□ 1.47
C11orf49-222ENST00000534581 POGKQ9P215 609 aa24.23■■□□□ 1.47
C11orf49-222ENST00000534581 NWD1Q149M9 1564 aa24.23■■□□□ 1.47
C11orf49-222ENST00000534581 ROBO2Q9HCK4 1378 aa24.22■■□□□ 1.47
C11orf49-222ENST00000534581 SETD1AO15047 1707 aaKnown RBP24.21■■□□□ 1.47
C11orf49-222ENST00000534581 ADGRB1O14514 1584 aa24.21■■□□□ 1.47
C11orf49-222ENST00000534581 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
C11orf49-222ENST00000534581 WAPLQ7Z5K2 1190 aa24.21■■□□□ 1.47
C11orf49-222ENST00000534581 PRAM1Q96QH2 718 aa24.2■■□□□ 1.46
C11orf49-222ENST00000534581 SAFB2Q14151 953 aaKnown RBP eCLIP24.19■■□□□ 1.46
C11orf49-222ENST00000534581 CHD2O14647 1828 aaKnown RBP24.19■■□□□ 1.46
C11orf49-222ENST00000534581 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
C11orf49-222ENST00000534581 RALGAPBQ86X10 1494 aa24.18■■□□□ 1.46
C11orf49-222ENST00000534581 TECPR2O15040 1411 aa24.18■■□□□ 1.46
C11orf49-222ENST00000534581 STRCP1A6NGW2 1772 aa24.17■■□□□ 1.46
C11orf49-222ENST00000534581 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
C11orf49-222ENST00000534581 XRN1Q8IZH2 1706 aaKnown RBP24.16■■□□□ 1.46
C11orf49-222ENST00000534581 KIAA1210Q9ULL0 1709 aa24.16■■□□□ 1.46
C11orf49-222ENST00000534581 PLEKHH1Q9ULM0 1364 aa24.15■■□□□ 1.46
C11orf49-222ENST00000534581 TRPM1Q7Z4N2 1603 aa24.14■■□□□ 1.46
C11orf49-222ENST00000534581 MSH6P52701 1360 aa24.14■■□□□ 1.45
C11orf49-222ENST00000534581 FAM135BQ49AJ0 1406 aa24.13■■□□□ 1.45
C11orf49-222ENST00000534581 GPRASP1Q5JY77 1395 aa24.13■■□□□ 1.45
C11orf49-222ENST00000534581 NCOA3Q9Y6Q9 1424 aa24.12■■□□□ 1.45
C11orf49-222ENST00000534581 C19orf44Q9H6X5 657 aa24.12■■□□□ 1.45
C11orf49-222ENST00000534581 ATF3P18847 181 aa24.11■■□□□ 1.45
C11orf49-222ENST00000534581 EIF3AQ14152 1382 aaKnown RBP24.11■■□□□ 1.45
C11orf49-222ENST00000534581 DLC1Q96QB1 1528 aa24.1■■□□□ 1.45
C11orf49-222ENST00000534581 MINK1Q8N4C8 1332 aaPredicted RBP24.09■■□□□ 1.45
C11orf49-222ENST00000534581 CENPJQ9HC77 1338 aaPredicted RBP24.09■■□□□ 1.45
C11orf49-222ENST00000534581 UBAP1LF5GYI3 381 aa24.08■■□□□ 1.45
C11orf49-222ENST00000534581 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms