RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	API5	Q9BZZ5	524 aa	Known RBP	19.46	■□□□□ 0.71
NCAPD3-213	ENST00000534532	AKAP17A	Q02040	695 aa	Known RBP	19.46	■□□□□ 0.71
NCAPD3-213	ENST00000534532	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	19.46	■□□□□ 0.71
NCAPD3-213	ENST00000534532	SYNE3	Q6ZMZ3	975 aa		19.45	■□□□□ 0.7
NCAPD3-213	ENST00000534532	RILPL2	Q969X0	211 aa		19.45	■□□□□ 0.7
NCAPD3-213	ENST00000534532	BCL2L13	Q9BXK5	485 aa		19.45	■□□□□ 0.7
NCAPD3-213	ENST00000534532	RBM33	Q96EV2	1170 aa	Known RBP	19.44	■□□□□ 0.7
NCAPD3-213	ENST00000534532	TMEM132E	Q6IEE7	984 aa		19.44	■□□□□ 0.7
NCAPD3-213	ENST00000534532	ABTB2	Q8N961	1025 aa		19.44	■□□□□ 0.7
NCAPD3-213	ENST00000534532	ST18	O60284	1047 aa		19.44	■□□□□ 0.7
NCAPD3-213	ENST00000534532	SF3B2	Q13435	895 aa	Known RBP	19.44	■□□□□ 0.7
NCAPD3-213	ENST00000534532	FBXW7	Q969H0	707 aa		19.44	■□□□□ 0.7
NCAPD3-213	ENST00000534532	APAF1	O14727	1248 aa		19.44	■□□□□ 0.7
NCAPD3-213	ENST00000534532	FKBP5	Q13451	457 aa	Predicted RBP	19.43	■□□□□ 0.7
NCAPD3-213	ENST00000534532	ANKLE2	Q86XL3	938 aa		19.43	■□□□□ 0.7
NCAPD3-213	ENST00000534532	TSPYL4	Q9UJ04	414 aa		19.43	■□□□□ 0.7
NCAPD3-213	ENST00000534532	NECTIN2	Q92692	538 aa		19.43	■□□□□ 0.7
NCAPD3-213	ENST00000534532	CABP2	Q9NPB3	220 aa		19.43	■□□□□ 0.7
NCAPD3-213	ENST00000534532	FYCO1	Q9BQS8	1478 aa		19.43	■□□□□ 0.7
NCAPD3-213	ENST00000534532	GNAI1	P63096	354 aa		19.42	■□□□□ 0.7
NCAPD3-213	ENST00000534532	CASKIN1	Q8WXD9	1431 aa		19.42	■□□□□ 0.7
NCAPD3-213	ENST00000534532	CFTR	P13569	1480 aa		19.42	■□□□□ 0.7
NCAPD3-213	ENST00000534532	ANKRD45	Q5TZF3	282 aa		19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	DIAPH3	Q9NSV4	1193 aa		19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	RRBP1	Q9P2E9	1410 aa	Known RBP	19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	G3BP1	Q13283	466 aa	Known RBP eCLIP	19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	GGNBP2	Q9H3C7	697 aa		19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	NOL8	Q76FK4	1167 aa	Known RBP	19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	PLEKHH2	Q8IVE3	1493 aa		19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	IFIT2	P09913	472 aa	Known RBP	19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	CPLX2	Q6PUV4	134 aa	Known RBP	19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	RUFY2	Q8WXA3	655 aa		19.41	■□□□□ 0.7
NCAPD3-213	ENST00000534532	USP35	Q9P2H5	1018 aa		19.4	■□□□□ 0.7
NCAPD3-213	ENST00000534532	SF3A1	Q15459	793 aa	Known RBP	19.4	■□□□□ 0.7
NCAPD3-213	ENST00000534532	PRKRIP1	Q9H875	184 aa	Predicted RBP	19.4	■□□□□ 0.7
NCAPD3-213	ENST00000534532	NES	P48681	1621 aa		19.4	■□□□□ 0.7
NCAPD3-213	ENST00000534532	RAD21	O60216	631 aa		19.4	■□□□□ 0.7
NCAPD3-213	ENST00000534532	SLC52A1	Q9NWF4	448 aa		19.4	■□□□□ 0.7
NCAPD3-213	ENST00000534532	RUNDC1	Q96C34	613 aa		19.39	■□□□□ 0.7
NCAPD3-213	ENST00000534532	ROCK1	Q13464	1354 aa		19.39	■□□□□ 0.69
NCAPD3-213	ENST00000534532	RIC3	Q7Z5B4	369 aa		19.38	■□□□□ 0.69
NCAPD3-213	ENST00000534532	MSN	P26038	577 aa	Known RBP	19.38	■□□□□ 0.69
NCAPD3-213	ENST00000534532	TCEAL9	Q9UHQ7	104 aa		19.38	■□□□□ 0.69
NCAPD3-213	ENST00000534532	SLK	Q9H2G2	1235 aa	Predicted RBP	19.38	■□□□□ 0.69
NCAPD3-213	ENST00000534532	NCOA2	Q15596	1464 aa		19.37	■□□□□ 0.69
NCAPD3-213	ENST00000534532	HMOX1	P09601	288 aa		19.37	■□□□□ 0.69
NCAPD3-213	ENST00000534532	DDX19B	Q9UMR2	479 aa		19.37	■□□□□ 0.69
NCAPD3-213	ENST00000534532	SCAPER	Q9BY12	1400 aa		19.37	■□□□□ 0.69
NCAPD3-213	ENST00000534532	APP	P05067	770 aa		19.37	■□□□□ 0.69
NCAPD3-213	ENST00000534532	PLEKHO1	Q53GL0	409 aa	Predicted RBP	19.36	■□□□□ 0.69
NCAPD3-213	ENST00000534532	STRN4	Q9NRL3	753 aa		19.36	■□□□□ 0.69
NCAPD3-213	ENST00000534532	HSP90AB4P	Q58FF6	505 aa		19.36	■□□□□ 0.69
NCAPD3-213	ENST00000534532	FAM184A	Q8NB25	1140 aa		19.36	■□□□□ 0.69
NCAPD3-213	ENST00000534532	CWC22	Q9HCG8	908 aa	Known RBP	19.35	■□□□□ 0.69
NCAPD3-213	ENST00000534532	CC2D2A	Q9P2K1	1620 aa		19.35	■□□□□ 0.69
NCAPD3-213	ENST00000534532		H3BQV1	296 aa		19.35	■□□□□ 0.69
NCAPD3-213	ENST00000534532	CFAP70	Q5T0N1	1121 aa		19.35	■□□□□ 0.69
NCAPD3-213	ENST00000534532	IFFO2	Q5TF58	517 aa		19.35	■□□□□ 0.69
NCAPD3-213	ENST00000534532	GAS2L2	Q8NHY3	880 aa		19.34	■□□□□ 0.69
NCAPD3-213	ENST00000534532	NUTM2B	A6NNL0	878 aa	Predicted RBP	19.33	■□□□□ 0.69
NCAPD3-213	ENST00000534532	NUTM2E	B1AL46	878 aa	Predicted RBP	19.33	■□□□□ 0.69
NCAPD3-213	ENST00000534532	RAPGEF3	O95398	923 aa		19.33	■□□□□ 0.69
NCAPD3-213	ENST00000534532	NUTM2A	Q8IVF1	878 aa	Predicted RBP	19.33	■□□□□ 0.69
NCAPD3-213	ENST00000534532	LRRC9	Q6ZRR7	1453 aa		19.33	■□□□□ 0.69
NCAPD3-213	ENST00000534532	ZKSCAN1	P17029	563 aa	Predicted RBP	19.33	■□□□□ 0.68
NCAPD3-213	ENST00000534532	NAP1L5	Q96NT1	182 aa	Predicted RBP	19.33	■□□□□ 0.68
NCAPD3-213	ENST00000534532	TAT	P17735	454 aa	Predicted RBP	19.32	■□□□□ 0.68
NCAPD3-213	ENST00000534532	TRDN	Q13061	729 aa		19.32	■□□□□ 0.68
NCAPD3-213	ENST00000534532	PRAM1	Q96QH2	718 aa		19.32	■□□□□ 0.68
NCAPD3-213	ENST00000534532	DHX16	O60231	1041 aa	Known RBP	19.32	■□□□□ 0.68
NCAPD3-213	ENST00000534532	AIMP1	Q12904	312 aa	Known RBP	19.32	■□□□□ 0.68
NCAPD3-213	ENST00000534532	SNAPC4	Q5SXM2	1469 aa		19.32	■□□□□ 0.68
NCAPD3-213	ENST00000534532	SMG6	Q86US8	1419 aa	Known RBP	19.32	■□□□□ 0.68
NCAPD3-213	ENST00000534532	CREBRF	Q8IUR6	639 aa		19.31	■□□□□ 0.68
NCAPD3-213	ENST00000534532	CENPQ	Q7L2Z9	268 aa	Predicted RBP	19.31	■□□□□ 0.68
NCAPD3-213	ENST00000534532	DZIP1L	Q8IYY4	767 aa	Known RBP	19.31	■□□□□ 0.68
NCAPD3-213	ENST00000534532	ZNF692	Q9BU19	519 aa	Predicted RBP	19.31	■□□□□ 0.68
NCAPD3-213	ENST00000534532	COG6	Q9Y2V7	657 aa		19.31	■□□□□ 0.68
NCAPD3-213	ENST00000534532	CEP89	Q96ST8	783 aa		19.3	■□□□□ 0.68
NCAPD3-213	ENST00000534532	RBM42	Q9BTD8	480 aa	Known RBP	19.3	■□□□□ 0.68
NCAPD3-213	ENST00000534532	TOPBP1	Q92547	1522 aa		19.29	■□□□□ 0.68
NCAPD3-213	ENST00000534532	HFM1	A2PYH4	1435 aa		19.29	■□□□□ 0.68
NCAPD3-213	ENST00000534532	TRIM29	Q14134	588 aa		19.29	■□□□□ 0.68
NCAPD3-213	ENST00000534532	TOM1L2	Q6ZVM7	507 aa		19.28	■□□□□ 0.68
NCAPD3-213	ENST00000534532	NOC3L	Q8WTT2	800 aa	Known RBP	19.28	■□□□□ 0.68
NCAPD3-213	ENST00000534532	REC8	O95072	547 aa		19.27	■□□□□ 0.68
NCAPD3-213	ENST00000534532	KIF6	Q6ZMV9	814 aa		19.27	■□□□□ 0.68
NCAPD3-213	ENST00000534532	ATP6V1D	Q9Y5K8	247 aa		19.27	■□□□□ 0.68
NCAPD3-213	ENST00000534532	PIP4K2B	P78356	416 aa		19.27	■□□□□ 0.68
NCAPD3-213	ENST00000534532	RNF20	Q5VTR2	975 aa		19.27	■□□□□ 0.68
NCAPD3-213	ENST00000534532	WWC1	Q8IX03	1113 aa		19.27	■□□□□ 0.67
NCAPD3-213	ENST00000534532	ERICH2	A1L162	156 aa		19.26	■□□□□ 0.67
NCAPD3-213	ENST00000534532	CPLX1	O14810	134 aa		19.26	■□□□□ 0.67
NCAPD3-213	ENST00000534532	ERC2	O15083	957 aa		19.26	■□□□□ 0.67
NCAPD3-213	ENST00000534532	SLC26A8	Q96RN1	970 aa		19.26	■□□□□ 0.67
NCAPD3-213	ENST00000534532	NEUROD6	Q96NK8	337 aa		19.26	■□□□□ 0.67
NCAPD3-213	ENST00000534532	TRO	Q12816	1431 aa	Predicted RBP	19.25	■□□□□ 0.67
NCAPD3-213	ENST00000534532	FOXD4L1	Q9NU39	408 aa		19.25	■□□□□ 0.67
NCAPD3-213	ENST00000534532	HMGB2	P26583	209 aa	Known RBP	19.25	■□□□□ 0.67
NCAPD3-213	ENST00000534532	PRM3	Q9NNZ6	103 aa		19.25	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms