RNA–Protein interactions for RNA: ENST00000534479.5

DKK3-215, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 1,087 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-215ENST00000534479 RGL3Q3MIN7 710 aa28.79■■■□□ 2.2
DKK3-215ENST00000534479 ZFYVE9O95405 1425 aa28.77■■■□□ 2.2
DKK3-215ENST00000534479 CLSPNQ9HAW4 1339 aa28.77■■■□□ 2.2
DKK3-215ENST00000534479 NEUROD1Q13562 356 aa28.77■■■□□ 2.2
DKK3-215ENST00000534479 ANKLE2Q86XL3 938 aa28.76■■■□□ 2.19
DKK3-215ENST00000534479 EID1Q9Y6B2 187 aa28.76■■■□□ 2.19
DKK3-215ENST00000534479 SCAF11Q99590 1463 aaKnown RBP28.75■■■□□ 2.19
DKK3-215ENST00000534479 HDGFP51858 240 aaKnown RBP28.75■■■□□ 2.19
DKK3-215ENST00000534479 RPGRIP1LQ68CZ1 1315 aa28.74■■■□□ 2.19
DKK3-215ENST00000534479 TXNDC2Q86VQ3 553 aa28.74■■■□□ 2.19
DKK3-215ENST00000534479 NCKAP5LQ9HCH0 1330 aa28.73■■■□□ 2.19
DKK3-215ENST00000534479 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.73■■■□□ 2.19
DKK3-215ENST00000534479 LTKP29376 864 aa28.71■■■□□ 2.19
DKK3-215ENST00000534479 IQGAP1P46940 1657 aa28.7■■■□□ 2.19
DKK3-215ENST00000534479 PPP1R15AO75807 674 aaPredicted RBP28.7■■■□□ 2.18
DKK3-215ENST00000534479 NUTM2DQ5VT03 806 aaPredicted RBP28.7■■■□□ 2.18
DKK3-215ENST00000534479 MED14O60244 1454 aa28.67■■■□□ 2.18
DKK3-215ENST00000534479 NPHP4O75161 1426 aaPredicted RBP28.66■■■□□ 2.18
DKK3-215ENST00000534479 VGFO15240 615 aaPredicted RBP28.64■■■□□ 2.18
DKK3-215ENST00000534479 PLEKHG1Q9ULL1 1385 aa28.63■■■□□ 2.17
DKK3-215ENST00000534479 MYOM2P54296 1465 aa28.63■■■□□ 2.17
DKK3-215ENST00000534479 TONSLQ96HA7 1378 aa28.62■■■□□ 2.17
DKK3-215ENST00000534479 DCAF11Q8TEB1 546 aa28.62■■■□□ 2.17
DKK3-215ENST00000534479 BCANQ96GW7 911 aa28.6■■■□□ 2.17
DKK3-215ENST00000534479 SENP3Q9H4L4 574 aaPredicted RBP28.6■■■□□ 2.17
DKK3-215ENST00000534479 KDM2AQ9Y2K7 1162 aa28.6■■■□□ 2.17
DKK3-215ENST00000534479 NRXN3Q9Y4C0 1643 aa28.6■■■□□ 2.17
DKK3-215ENST00000534479 L3MBTL2Q969R5 705 aa28.59■■■□□ 2.17
DKK3-215ENST00000534479 DMRT2Q9Y5R5 561 aa28.59■■■□□ 2.17
DKK3-215ENST00000534479 SETBP1Q9Y6X0 1596 aa28.58■■■□□ 2.17
DKK3-215ENST00000534479 ADGRF5Q8IZF2 1346 aa28.57■■■□□ 2.16
DKK3-215ENST00000534479 STAC3Q96MF2 364 aa28.56■■■□□ 2.16
DKK3-215ENST00000534479 DIP2AQ14689 1571 aa28.55■■■□□ 2.16
DKK3-215ENST00000534479 NRXN1Q9ULB1 1477 aa28.55■■■□□ 2.16
DKK3-215ENST00000534479 SETD1AO15047 1707 aaKnown RBP28.53■■■□□ 2.16
DKK3-215ENST00000534479 PIK3C2GO75747 1445 aa28.52■■■□□ 2.16
DKK3-215ENST00000534479 LAMC1P11047 1609 aa28.52■■■□□ 2.16
DKK3-215ENST00000534479 ADAMTS13Q76LX8 1427 aa28.51■■■□□ 2.15
DKK3-215ENST00000534479 ALKQ9UM73 1620 aa28.51■■■□□ 2.15
DKK3-215ENST00000534479 SLC26A8Q96RN1 970 aa28.5■■■□□ 2.15
DKK3-215ENST00000534479 TIMELESSQ9UNS1 1208 aa28.47■■■□□ 2.15
DKK3-215ENST00000534479 PRAG1Q86YV5 1406 aa28.46■■■□□ 2.15
DKK3-215ENST00000534479 TBX22Q9Y458 520 aa28.46■■■□□ 2.15
DKK3-215ENST00000534479 KIAA1210Q9ULL0 1709 aa28.46■■■□□ 2.15
DKK3-215ENST00000534479 CHD2O14647 1828 aaKnown RBP28.45■■■□□ 2.14
DKK3-215ENST00000534479 TRPM1Q7Z4N2 1603 aa28.41■■■□□ 2.14
DKK3-215ENST00000534479 C14orf93Q9H972 538 aaKnown RBP28.4■■■□□ 2.14
DKK3-215ENST00000534479 STRCP1A6NGW2 1772 aa28.39■■■□□ 2.14
DKK3-215ENST00000534479 CFAP70Q5T0N1 1121 aa28.39■■■□□ 2.14
DKK3-215ENST00000534479 METP08581 1390 aa28.37■■■□□ 2.13
DKK3-215ENST00000534479 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
DKK3-215ENST00000534479 ASXL1Q8IXJ9 1541 aa28.37■■■□□ 2.13
DKK3-215ENST00000534479 NWD1Q149M9 1564 aa28.37■■■□□ 2.13
DKK3-215ENST00000534479 NBPF8Q3BBV2 869 aa28.34■■■□□ 2.13
DKK3-215ENST00000534479 ZNF335Q9H4Z2 1342 aaPredicted RBP28.34■■■□□ 2.13
DKK3-215ENST00000534479 XRN1Q8IZH2 1706 aaKnown RBP28.34■■■□□ 2.13
DKK3-215ENST00000534479 PTPRUQ92729 1446 aa28.32■■■□□ 2.12
DKK3-215ENST00000534479 ADGRB1O14514 1584 aa28.32■■■□□ 2.12
DKK3-215ENST00000534479 KNDC1Q76NI1 1749 aa28.32■■■□□ 2.12
DKK3-215ENST00000534479 TMEM132EQ6IEE7 984 aa28.31■■■□□ 2.12
DKK3-215ENST00000534479 KCNA6P17658 529 aa28.3■■■□□ 2.12
DKK3-215ENST00000534479 AMOTL2Q9Y2J4 779 aa28.28■■■□□ 2.12
DKK3-215ENST00000534479 YTHDC2Q9H6S0 1430 aaKnown RBP28.27■■■□□ 2.12
DKK3-215ENST00000534479 LTBP4Q8N2S1 1624 aa28.27■■■□□ 2.12
DKK3-215ENST00000534479 CPS1P31327 1500 aa28.27■■■□□ 2.12
DKK3-215ENST00000534479 NKTRP30414 1462 aaKnown RBP28.27■■■□□ 2.12
DKK3-215ENST00000534479 RALGAPBQ86X10 1494 aa28.27■■■□□ 2.12
DKK3-215ENST00000534479 NBPF1Q3BBV0 1214 aa28.25■■■□□ 2.11
DKK3-215ENST00000534479 ROCK2O75116 1388 aaKnown RBP28.24■■■□□ 2.11
DKK3-215ENST00000534479 LRPPRCP42704 1394 aaKnown RBP28.24■■■□□ 2.11
DKK3-215ENST00000534479 STK26Q9P289 416 aa28.23■■■□□ 2.11
DKK3-215ENST00000534479 ARHGEF28Q8N1W1 1705 aaKnown RBP28.21■■■□□ 2.11
DKK3-215ENST00000534479 XIRP1Q702N8 1843 aaKnown RBP28.21■■■□□ 2.11
DKK3-215ENST00000534479 ABCC11Q96J66 1382 aa28.2■■■□□ 2.1
DKK3-215ENST00000534479 TECPR2O15040 1411 aa28.19■■■□□ 2.1
DKK3-215ENST00000534479 PTCH1Q13635 1447 aa28.19■■■□□ 2.1
DKK3-215ENST00000534479 GPRASP1Q5JY77 1395 aa28.18■■■□□ 2.1
DKK3-215ENST00000534479 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
DKK3-215ENST00000534479 PROSER2Q86WR7 435 aaPredicted RBP28.17■■■□□ 2.1
DKK3-215ENST00000534479 LRRC7Q96NW7 1537 aa28.17■■■□□ 2.1
DKK3-215ENST00000534479 TRAK1Q9UPV9 953 aa28.16■■■□□ 2.1
DKK3-215ENST00000534479 ROBO2Q9HCK4 1378 aa28.14■■■□□ 2.1
DKK3-215ENST00000534479 CARD11Q9BXL7 1154 aa28.14■■■□□ 2.1
DKK3-215ENST00000534479 FAM135BQ49AJ0 1406 aa28.11■■■□□ 2.09
DKK3-215ENST00000534479 TMEM94Q12767 1356 aa28.11■■■□□ 2.09
DKK3-215ENST00000534479 NALCNQ8IZF0 1738 aa28.1■■■□□ 2.09
DKK3-215ENST00000534479 SIRT1Q96EB6 747 aa28.1■■■□□ 2.09
DKK3-215ENST00000534479 RBM33Q96EV2 1170 aaKnown RBP28.09■■■□□ 2.09
DKK3-215ENST00000534479 ZEB1P37275 1124 aaPredicted RBP28.08■■■□□ 2.09
DKK3-215ENST00000534479 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.07■■■□□ 2.08
DKK3-215ENST00000534479 WAPLQ7Z5K2 1190 aa28.07■■■□□ 2.08
DKK3-215ENST00000534479 PRAM1Q96QH2 718 aa28.07■■■□□ 2.08
DKK3-215ENST00000534479 POGKQ9P215 609 aa28.07■■■□□ 2.08
DKK3-215ENST00000534479 PLEKHH1Q9ULM0 1364 aa28.07■■■□□ 2.08
DKK3-215ENST00000534479 NCOA3Q9Y6Q9 1424 aa28.07■■■□□ 2.08
DKK3-215ENST00000534479 QRICH2Q9H0J4 1663 aa28.07■■■□□ 2.08
DKK3-215ENST00000534479 EIF3AQ14152 1382 aaKnown RBP28.05■■■□□ 2.08
DKK3-215ENST00000534479 C14orf37Q86TY3 774 aa28.05■■■□□ 2.08
DKK3-215ENST00000534479 IQSEC2Q5JU85 1478 aa28.03■■■□□ 2.08
DKK3-215ENST00000534479 ILDR1Q86SU0 546 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms