RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
CAPN1-228ENST00000534373 PLEKHG1Q9ULL1 1385 aa20.27■□□□□ 0.84
CAPN1-228ENST00000534373 BCANQ96GW7 911 aa20.27■□□□□ 0.84
CAPN1-228ENST00000534373 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-228ENST00000534373 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
CAPN1-228ENST00000534373 HSPA1LP34931 641 aa20.26■□□□□ 0.83
CAPN1-228ENST00000534373 NAIPQ13075 1403 aa20.26■□□□□ 0.83
CAPN1-228ENST00000534373 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
CAPN1-228ENST00000534373 TBX22Q9Y458 520 aa20.24■□□□□ 0.83
CAPN1-228ENST00000534373 PROSER2Q86WR7 435 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-228ENST00000534373 MYO5BQ9ULV0 1848 aa20.21■□□□□ 0.83
CAPN1-228ENST00000534373 TMEM94Q12767 1356 aa20.21■□□□□ 0.83
CAPN1-228ENST00000534373 HFM1A2PYH4 1435 aa20.2■□□□□ 0.82
CAPN1-228ENST00000534373 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
CAPN1-228ENST00000534373 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
CAPN1-228ENST00000534373 XIRP1Q702N8 1843 aaKnown RBP20.17■□□□□ 0.82
CAPN1-228ENST00000534373 PIK3R4Q99570 1358 aa20.17■□□□□ 0.82
CAPN1-228ENST00000534373 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
CAPN1-228ENST00000534373 SPHKAPQ2M3C7 1700 aa20.15■□□□□ 0.82
CAPN1-228ENST00000534373 FAM135BQ49AJ0 1406 aa20.14■□□□□ 0.81
CAPN1-228ENST00000534373 ADAMTS13Q76LX8 1427 aa20.14■□□□□ 0.81
CAPN1-228ENST00000534373 NCOA3Q9Y6Q9 1424 aa20.14■□□□□ 0.81
CAPN1-228ENST00000534373 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.81
CAPN1-228ENST00000534373 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
CAPN1-228ENST00000534373 DIP2AQ14689 1571 aa20.13■□□□□ 0.81
CAPN1-228ENST00000534373 ILDR2Q71H61 639 aa20.12■□□□□ 0.81
CAPN1-228ENST00000534373 MSH6P52701 1360 aa20.11■□□□□ 0.81
CAPN1-228ENST00000534373 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
CAPN1-228ENST00000534373 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
CAPN1-228ENST00000534373 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
CAPN1-228ENST00000534373 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
CAPN1-228ENST00000534373 TRPM2O94759 1503 aa20.1■□□□□ 0.81
CAPN1-228ENST00000534373 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
CAPN1-228ENST00000534373 SLAIN2Q9P270 581 aa20.06■□□□□ 0.8
CAPN1-228ENST00000534373 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
CAPN1-228ENST00000534373 SETBP1Q9Y6X0 1596 aa20.05■□□□□ 0.8
CAPN1-228ENST00000534373 C19orf44Q9H6X5 657 aa20.05■□□□□ 0.8
CAPN1-228ENST00000534373 CLTCL1P53675 1640 aa20.05■□□□□ 0.8
CAPN1-228ENST00000534373 SOCS7O14512 581 aa20.04■□□□□ 0.8
CAPN1-228ENST00000534373 RPGRIP1LQ68CZ1 1315 aa20.03■□□□□ 0.8
CAPN1-228ENST00000534373 VGFO15240 615 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-228ENST00000534373 MED1Q15648 1581 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-228ENST00000534373 KIF1BO60333 1816 aa20.02■□□□□ 0.8
CAPN1-228ENST00000534373 C14orf37Q86TY3 774 aa20.02■□□□□ 0.8
CAPN1-228ENST00000534373 CADPS2Q86UW7 1296 aa20.02■□□□□ 0.8
CAPN1-228ENST00000534373 NEXMIFQ5QGS0 1516 aa20.01■□□□□ 0.79
CAPN1-228ENST00000534373 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
CAPN1-228ENST00000534373 NRXN3Q9Y4C0 1643 aa19.99■□□□□ 0.79
CAPN1-228ENST00000534373 ATF3P18847 181 aa19.99■□□□□ 0.79
CAPN1-228ENST00000534373 ROBO1Q9Y6N7 1651 aa19.99■□□□□ 0.79
CAPN1-228ENST00000534373 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
CAPN1-228ENST00000534373 METP08581 1390 aa19.97■□□□□ 0.79
CAPN1-228ENST00000534373 PHF23Q9BUL5 403 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-228ENST00000534373 DCCP43146 1447 aa19.93■□□□□ 0.78
CAPN1-228ENST00000534373 XRN1Q8IZH2 1706 aaKnown RBP19.93■□□□□ 0.78
CAPN1-228ENST00000534373 FOXD1Q16676 465 aa19.93■□□□□ 0.78
CAPN1-228ENST00000534373 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-228ENST00000534373 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
CAPN1-228ENST00000534373 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
CAPN1-228ENST00000534373 JCADQ9P266 1359 aa19.88■□□□□ 0.77
CAPN1-228ENST00000534373 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
CAPN1-228ENST00000534373 SPATA31E1Q6ZUB1 1445 aa19.86■□□□□ 0.77
CAPN1-228ENST00000534373 PPLO60437 1756 aa19.86■□□□□ 0.77
CAPN1-228ENST00000534373 PHLPP1O60346 1717 aa19.86■□□□□ 0.77
CAPN1-228ENST00000534373 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
CAPN1-228ENST00000534373 PRAG1Q86YV5 1406 aa19.85■□□□□ 0.77
CAPN1-228ENST00000534373 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
CAPN1-228ENST00000534373 RGL3Q3MIN7 710 aa19.85■□□□□ 0.77
CAPN1-228ENST00000534373 BRINP3Q76B58 766 aa19.85■□□□□ 0.77
CAPN1-228ENST00000534373 HRCP23327 699 aa19.83■□□□□ 0.77
CAPN1-228ENST00000534373 RGS17Q9UGC6 210 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-228ENST00000534373 AHDC1Q5TGY3 1603 aaPredicted RBP19.83■□□□□ 0.76
CAPN1-228ENST00000534373 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
CAPN1-228ENST00000534373 SETD1AO15047 1707 aaKnown RBP19.82■□□□□ 0.76
CAPN1-228ENST00000534373 ADGRF5Q8IZF2 1346 aa19.82■□□□□ 0.76
CAPN1-228ENST00000534373 MST1RQ04912 1400 aa19.82■□□□□ 0.76
CAPN1-228ENST00000534373 SPATA31A6Q5VVP1 1343 aa19.81■□□□□ 0.76
CAPN1-228ENST00000534373 COL16A1Q07092 1604 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-228ENST00000534373 ROBO2Q9HCK4 1378 aa19.81■□□□□ 0.76
CAPN1-228ENST00000534373 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
CAPN1-228ENST00000534373 LRRC59Q96AG4 307 aaKnown RBP19.76■□□□□ 0.75
CAPN1-228ENST00000534373 NALCNQ8IZF0 1738 aa19.75■□□□□ 0.75
CAPN1-228ENST00000534373 PIK3C2GO75747 1445 aa19.75■□□□□ 0.75
CAPN1-228ENST00000534373 C1orf167Q5SNV9 1468 aa19.74■□□□□ 0.75
CAPN1-228ENST00000534373 IFT172Q9UG01 1749 aa19.74■□□□□ 0.75
CAPN1-228ENST00000534373 ABCC11Q96J66 1382 aa19.74■□□□□ 0.75
CAPN1-228ENST00000534373 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
CAPN1-228ENST00000534373 C14orf93Q9H972 538 aaKnown RBP19.73■□□□□ 0.75
CAPN1-228ENST00000534373 TECPR2O15040 1411 aa19.73■□□□□ 0.75
CAPN1-228ENST00000534373 SHPRHQ149N8 1683 aa19.72■□□□□ 0.75
CAPN1-228ENST00000534373 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
CAPN1-228ENST00000534373 POTEAQ6S8J7 498 aa19.71■□□□□ 0.75
CAPN1-228ENST00000534373 NHSL1Q5SYE7 1610 aa19.7■□□□□ 0.74
CAPN1-228ENST00000534373 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
CAPN1-228ENST00000534373 STAC3Q96MF2 364 aa19.7■□□□□ 0.74
CAPN1-228ENST00000534373 STK26Q9P289 416 aa19.7■□□□□ 0.74
CAPN1-228ENST00000534373 MYOM2P54296 1465 aa19.69■□□□□ 0.74
CAPN1-228ENST00000534373 NRXN1Q9ULB1 1477 aa19.69■□□□□ 0.74
CAPN1-228ENST00000534373 MEX3CQ5U5Q3 659 aaKnown RBP19.69■□□□□ 0.74
CAPN1-228ENST00000534373 ORAI2Q96SN7 254 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms