RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 GLI2P10070 1586 aa18.55■□□□□ 0.56
FOXRED1-218ENST00000534315 PNISRQ8TF01 805 aaKnown RBP18.54■□□□□ 0.56
FOXRED1-218ENST00000534315 ADGRB3O60242 1522 aa18.54■□□□□ 0.56
FOXRED1-218ENST00000534315 BRD4O60885 1362 aaPredicted RBP18.53■□□□□ 0.56
FOXRED1-218ENST00000534315 PARD3Q8TEW0 1356 aa18.53■□□□□ 0.56
FOXRED1-218ENST00000534315 ADGRF5Q8IZF2 1346 aa18.53■□□□□ 0.56
FOXRED1-218ENST00000534315 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
FOXRED1-218ENST00000534315 CAMSAP1Q5T5Y3 1602 aa18.52■□□□□ 0.55
FOXRED1-218ENST00000534315 PANK3Q9H999 370 aa18.51■□□□□ 0.55
FOXRED1-218ENST00000534315 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
FOXRED1-218ENST00000534315 YEATS2Q9ULM3 1422 aa18.5■□□□□ 0.55
FOXRED1-218ENST00000534315 NRXN1Q9ULB1 1477 aa18.5■□□□□ 0.55
FOXRED1-218ENST00000534315 EIF3AQ14152 1382 aaKnown RBP18.49■□□□□ 0.55
FOXRED1-218ENST00000534315 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
FOXRED1-218ENST00000534315 NOS1P29475 1434 aa18.48■□□□□ 0.55
FOXRED1-218ENST00000534315 LRPPRCP42704 1394 aaKnown RBP18.48■□□□□ 0.55
FOXRED1-218ENST00000534315 SIGLEC1Q9BZZ2 1709 aa18.48■□□□□ 0.55
FOXRED1-218ENST00000534315 DIP2BQ9P265 1576 aa18.47■□□□□ 0.55
FOXRED1-218ENST00000534315 NLRP13Q86W25 1043 aa18.47■□□□□ 0.55
FOXRED1-218ENST00000534315 CC2D1BQ5T0F9 858 aaKnown RBP18.46■□□□□ 0.55
FOXRED1-218ENST00000534315 PPLO60437 1756 aa18.46■□□□□ 0.55
FOXRED1-218ENST00000534315 FAM69CQ0P6D2 419 aa18.46■□□□□ 0.55
FOXRED1-218ENST00000534315 SYNMO15061 1565 aa18.45■□□□□ 0.54
FOXRED1-218ENST00000534315 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
FOXRED1-218ENST00000534315 IRX6P78412 446 aaPredicted RBP18.43■□□□□ 0.54
FOXRED1-218ENST00000534315 ZC3H13Q5T200 1668 aaKnown RBP18.43■□□□□ 0.54
FOXRED1-218ENST00000534315 MYOM1P52179 1685 aa18.43■□□□□ 0.54
FOXRED1-218ENST00000534315 PIK3C2BO00750 1634 aa18.43■□□□□ 0.54
FOXRED1-218ENST00000534315 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
FOXRED1-218ENST00000534315 TSPOAP1O95153 1857 aa18.42■□□□□ 0.54
FOXRED1-218ENST00000534315 SENP3-EIF4A1A0A087X0R7 540 aa18.41■□□□□ 0.54
FOXRED1-218ENST00000534315 PIK3C2GO75747 1445 aa18.41■□□□□ 0.54
FOXRED1-218ENST00000534315 KDM5AP29375 1690 aaKnown RBP18.41■□□□□ 0.54
FOXRED1-218ENST00000534315 SETBP1Q9Y6X0 1596 aa18.41■□□□□ 0.54
FOXRED1-218ENST00000534315 ARHGAP31Q2M1Z3 1444 aa18.41■□□□□ 0.54
FOXRED1-218ENST00000534315 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
FOXRED1-218ENST00000534315 MYO3AQ8NEV4 1616 aa18.39■□□□□ 0.54
FOXRED1-218ENST00000534315 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
FOXRED1-218ENST00000534315 RPGRIP1LQ68CZ1 1315 aa18.39■□□□□ 0.53
FOXRED1-218ENST00000534315 KNSTRNQ9Y448 316 aa18.38■□□□□ 0.53
FOXRED1-218ENST00000534315 C14orf93Q9H972 538 aaKnown RBP18.37■□□□□ 0.53
FOXRED1-218ENST00000534315 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
FOXRED1-218ENST00000534315 ADGRB1O14514 1584 aa18.36■□□□□ 0.53
FOXRED1-218ENST00000534315 AMER1Q5JTC6 1135 aaPredicted RBP18.35■□□□□ 0.53
FOXRED1-218ENST00000534315 NEXMIFQ5QGS0 1516 aa18.35■□□□□ 0.53
FOXRED1-218ENST00000534315 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
FOXRED1-218ENST00000534315 ASXL1Q8IXJ9 1541 aa18.34■□□□□ 0.53
FOXRED1-218ENST00000534315 SBNO2Q9Y2G9 1366 aa18.34■□□□□ 0.53
FOXRED1-218ENST00000534315 PREX1Q8TCU6 1659 aa18.33■□□□□ 0.53
FOXRED1-218ENST00000534315 IDI1Q13907 227 aa18.33■□□□□ 0.53
FOXRED1-218ENST00000534315 TSHZ2Q9NRE2 1034 aa18.33■□□□□ 0.53
FOXRED1-218ENST00000534315 CENPJQ9HC77 1338 aaPredicted RBP18.33■□□□□ 0.52
FOXRED1-218ENST00000534315 TRAK1Q9UPV9 953 aa18.33■□□□□ 0.52
FOXRED1-218ENST00000534315 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
FOXRED1-218ENST00000534315 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
FOXRED1-218ENST00000534315 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
FOXRED1-218ENST00000534315 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
FOXRED1-218ENST00000534315 MYO5BQ9ULV0 1848 aa18.3■□□□□ 0.52
FOXRED1-218ENST00000534315 PPP2R1AP30153 589 aa18.3■□□□□ 0.52
FOXRED1-218ENST00000534315 SLC52A1Q9NWF4 448 aa18.3■□□□□ 0.52
FOXRED1-218ENST00000534315 VGFO15240 615 aaPredicted RBP18.29■□□□□ 0.52
FOXRED1-218ENST00000534315 REREQ9P2R6 1566 aa18.29■□□□□ 0.52
FOXRED1-218ENST00000534315 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
FOXRED1-218ENST00000534315 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
FOXRED1-218ENST00000534315 INSRP06213 1382 aa18.28■□□□□ 0.52
FOXRED1-218ENST00000534315 TMEM131LA2VDJ0 1609 aa18.27■□□□□ 0.52
FOXRED1-218ENST00000534315 AGLP35573 1532 aa18.26■□□□□ 0.51
FOXRED1-218ENST00000534315 SALL2Q9Y467 1007 aaPredicted RBP18.26■□□□□ 0.51
FOXRED1-218ENST00000534315 PPP4R2Q9NY27 417 aa18.26■□□□□ 0.51
FOXRED1-218ENST00000534315 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
FOXRED1-218ENST00000534315 KIF13AQ9H1H9 1805 aa18.25■□□□□ 0.51
FOXRED1-218ENST00000534315 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
FOXRED1-218ENST00000534315 ZFYVE9O95405 1425 aa18.25■□□□□ 0.51
FOXRED1-218ENST00000534315 ARHGEF28Q8N1W1 1705 aaKnown RBP18.25■□□□□ 0.51
FOXRED1-218ENST00000534315 CARD14Q9BXL6 1004 aa18.25■□□□□ 0.51
FOXRED1-218ENST00000534315 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
FOXRED1-218ENST00000534315 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
FOXRED1-218ENST00000534315 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
FOXRED1-218ENST00000534315 ARHGEF40Q8TER5 1519 aa18.2■□□□□ 0.5
FOXRED1-218ENST00000534315 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
FOXRED1-218ENST00000534315 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
FOXRED1-218ENST00000534315 WDR43Q15061 677 aaKnown RBP eCLIP18.19■□□□□ 0.5
FOXRED1-218ENST00000534315 TULP4Q9NRJ4 1543 aa18.18■□□□□ 0.5
FOXRED1-218ENST00000534315 SLC12A5Q9H2X9 1139 aa18.18■□□□□ 0.5
FOXRED1-218ENST00000534315 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
FOXRED1-218ENST00000534315 MLECQ14165 292 aa18.17■□□□□ 0.5
FOXRED1-218ENST00000534315 B4GALNT3Q6L9W6 998 aa18.17■□□□□ 0.5
FOXRED1-218ENST00000534315 CDCA7LQ96GN5 454 aa18.17■□□□□ 0.5
FOXRED1-218ENST00000534315 EVC2Q86UK5 1308 aa18.15■□□□□ 0.5
FOXRED1-218ENST00000534315 SPATA31D1Q6ZQQ2 1576 aa18.15■□□□□ 0.5
FOXRED1-218ENST00000534315 STK26Q9P289 416 aa18.14■□□□□ 0.49
FOXRED1-218ENST00000534315 STAG3Q9UJ98 1225 aa18.14■□□□□ 0.49
FOXRED1-218ENST00000534315 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.491e-7■■□□□ 13.2
FOXRED1-218ENST00000534315 PUS7Q96PZ0 661 aaKnown RBP18.13■□□□□ 0.49
FOXRED1-218ENST00000534315 RCAN3Q9UKA8 241 aa18.13■□□□□ 0.49
FOXRED1-218ENST00000534315 USP32Q8NFA0 1604 aa18.11■□□□□ 0.49
FOXRED1-218ENST00000534315 ALKQ9UM73 1620 aa18.11■□□□□ 0.49
FOXRED1-218ENST00000534315 PTPRMP28827 1452 aa18.11■□□□□ 0.49
FOXRED1-218ENST00000534315 A2ML1A8K2U0 1454 aa18.11■□□□□ 0.49
FOXRED1-218ENST00000534315 YTHDC2Q9H6S0 1430 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms