RNA–Protein interactions for RNA: ENST00000534270.1

RECQL4-206, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-206ENST00000534270 NUTM2DQ5VT03 806 aaPredicted RBP32.74■■■□□ 2.83
RECQL4-206ENST00000534270 KCNA6P17658 529 aa32.73■■■□□ 2.83
RECQL4-206ENST00000534270 RRBP1Q9P2E9 1410 aaKnown RBP32.72■■■□□ 2.83
RECQL4-206ENST00000534270 IQGAP3Q86VI3 1631 aa32.72■■■□□ 2.83
RECQL4-206ENST00000534270 MYO5BQ9ULV0 1848 aa32.71■■■□□ 2.83
RECQL4-206ENST00000534270 ZFYVE9O95405 1425 aa32.7■■■□□ 2.83
RECQL4-206ENST00000534270 RIMS2Q9UQ26 1411 aa32.7■■■□□ 2.83
RECQL4-206ENST00000534270 TMEM131LA2VDJ0 1609 aa32.69■■■□□ 2.82
RECQL4-206ENST00000534270 PPP1R15AO75807 674 aaPredicted RBP32.68■■■□□ 2.82
RECQL4-206ENST00000534270 PROSER2Q86WR7 435 aaPredicted RBP32.67■■■□□ 2.82
RECQL4-206ENST00000534270 TMEM94Q12767 1356 aa32.66■■■□□ 2.82
RECQL4-206ENST00000534270 XIRP1Q702N8 1843 aaKnown RBP32.65■■■□□ 2.82
RECQL4-206ENST00000534270 HDGFP51858 240 aaKnown RBP32.64■■■□□ 2.82
RECQL4-206ENST00000534270 PLEKHG1Q9ULL1 1385 aa32.63■■■□□ 2.81
RECQL4-206ENST00000534270 NAIPQ13075 1403 aa32.6■■■□□ 2.81
RECQL4-206ENST00000534270 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.58■■■□□ 2.81
RECQL4-206ENST00000534270 TBX22Q9Y458 520 aa32.55■■■□□ 2.8
RECQL4-206ENST00000534270 ADAMTS13Q76LX8 1427 aa32.51■■■□□ 2.79
RECQL4-206ENST00000534270 TRIM52Q96A61 297 aa32.5■■■□□ 2.79
RECQL4-206ENST00000534270 NWD1Q149M9 1564 aa32.49■■■□□ 2.79
RECQL4-206ENST00000534270 ZNF326Q5BKZ1 582 aaKnown RBP32.47■■■□□ 2.79
RECQL4-206ENST00000534270 SOCS7O14512 581 aa32.46■■■□□ 2.79
RECQL4-206ENST00000534270 NKTRP30414 1462 aaKnown RBP32.46■■■□□ 2.79
RECQL4-206ENST00000534270 MED1Q15648 1581 aaPredicted RBP32.45■■■□□ 2.79
RECQL4-206ENST00000534270 CHD2O14647 1828 aaKnown RBP32.45■■■□□ 2.79
RECQL4-206ENST00000534270 FAM135BQ49AJ0 1406 aa32.43■■■□□ 2.78
RECQL4-206ENST00000534270 SPHKAPQ2M3C7 1700 aa32.43■■■□□ 2.78
RECQL4-206ENST00000534270 HFM1A2PYH4 1435 aa32.42■■■□□ 2.78
RECQL4-206ENST00000534270 MSH6P52701 1360 aa32.4■■■□□ 2.78
RECQL4-206ENST00000534270 SLAIN2Q9P270 581 aa32.39■■■□□ 2.78
RECQL4-206ENST00000534270 AMOTL2Q9Y2J4 779 aa32.38■■■□□ 2.77
RECQL4-206ENST00000534270 PTPRUQ92729 1446 aa32.37■■■□□ 2.77
RECQL4-206ENST00000534270 SLC4A1APQ9BWU0 796 aaKnown RBP32.37■■■□□ 2.77
RECQL4-206ENST00000534270 CLTCL1P53675 1640 aa32.36■■■□□ 2.77
RECQL4-206ENST00000534270 C14orf37Q86TY3 774 aa32.35■■■□□ 2.77
RECQL4-206ENST00000534270 FOXD1Q16676 465 aa32.33■■■□□ 2.77
RECQL4-206ENST00000534270 PIK3R4Q99570 1358 aa32.32■■■□□ 2.77
RECQL4-206ENST00000534270 ROBO1Q9Y6N7 1651 aa32.32■■■□□ 2.76
RECQL4-206ENST00000534270 PHF23Q9BUL5 403 aaPredicted RBP32.32■■■□□ 2.76
RECQL4-206ENST00000534270 TRPM2O94759 1503 aa32.31■■■□□ 2.76
RECQL4-206ENST00000534270 DIP2AQ14689 1571 aa32.31■■■□□ 2.76
RECQL4-206ENST00000534270 METP08581 1390 aa32.29■■■□□ 2.76
RECQL4-206ENST00000534270 NRXN3Q9Y4C0 1643 aa32.28■■■□□ 2.76
RECQL4-206ENST00000534270 C19orf44Q9H6X5 657 aa32.27■■■□□ 2.76
RECQL4-206ENST00000534270 NCOA3Q9Y6Q9 1424 aa32.26■■■□□ 2.75
RECQL4-206ENST00000534270 NEXMIFQ5QGS0 1516 aa32.25■■■□□ 2.75
RECQL4-206ENST00000534270 SETBP1Q9Y6X0 1596 aa32.24■■■□□ 2.75
RECQL4-206ENST00000534270 ATF3P18847 181 aa32.22■■■□□ 2.75
RECQL4-206ENST00000534270 RGS17Q9UGC6 210 aaPredicted RBP32.21■■■□□ 2.75
RECQL4-206ENST00000534270 CADPS2Q86UW7 1296 aa32.2■■■□□ 2.75
RECQL4-206ENST00000534270 KIF1BO60333 1816 aa32.19■■■□□ 2.74
RECQL4-206ENST00000534270 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.18■■■□□ 2.74
RECQL4-206ENST00000534270 MPHOSPH9Q99550 1183 aa32.17■■■□□ 2.74
RECQL4-206ENST00000534270 VGFO15240 615 aaPredicted RBP32.16■■■□□ 2.74
RECQL4-206ENST00000534270 XRN1Q8IZH2 1706 aaKnown RBP32.13■■■□□ 2.73
RECQL4-206ENST00000534270 RPGRIP1LQ68CZ1 1315 aa32.11■■■□□ 2.73
RECQL4-206ENST00000534270 PHLPP1O60346 1717 aa32.11■■■□□ 2.73
RECQL4-206ENST00000534270 RGL3Q3MIN7 710 aa32.09■■■□□ 2.73
RECQL4-206ENST00000534270 BRINP3Q76B58 766 aa32.08■■■□□ 2.73
RECQL4-206ENST00000534270 JCADQ9P266 1359 aa32.05■■■□□ 2.72
RECQL4-206ENST00000534270 ADGRF5Q8IZF2 1346 aa32.02■■■□□ 2.72
RECQL4-206ENST00000534270 COL16A1Q07092 1604 aaPredicted RBP32.02■■■□□ 2.72
RECQL4-206ENST00000534270 POTEAQ6S8J7 498 aa32.02■■■□□ 2.72
RECQL4-206ENST00000534270 CCDC144AA2RUR9 1427 aa32.01■■■□□ 2.72
RECQL4-206ENST00000534270 SETD5Q9C0A6 1442 aa32.01■■■□□ 2.72
RECQL4-206ENST00000534270 ROBO2Q9HCK4 1378 aa32.01■■■□□ 2.71
RECQL4-206ENST00000534270 MST1RQ04912 1400 aa32■■■□□ 2.71
RECQL4-206ENST00000534270 DCCP43146 1447 aa31.99■■■□□ 2.71
RECQL4-206ENST00000534270 DDX17Q92841 729 aaKnown RBP31.98■■■□□ 2.71
RECQL4-206ENST00000534270 PPLO60437 1756 aa31.98■■■□□ 2.71
RECQL4-206ENST00000534270 ADGRL3Q9HAR2 1447 aa31.98■■■□□ 2.71
RECQL4-206ENST00000534270 SETD1AO15047 1707 aaKnown RBP31.97■■■□□ 2.71
RECQL4-206ENST00000534270 SPATA31E1Q6ZUB1 1445 aa31.97■■■□□ 2.71
RECQL4-206ENST00000534270 AHDC1Q5TGY3 1603 aaPredicted RBP31.95■■■□□ 2.71
RECQL4-206ENST00000534270 ASXL1Q8IXJ9 1541 aa31.92■■■□□ 2.7
RECQL4-206ENST00000534270 RAB3GAP2Q9H2M9 1393 aa31.92■■■□□ 2.7
RECQL4-206ENST00000534270 NALCNQ8IZF0 1738 aa31.92■■■□□ 2.7
RECQL4-206ENST00000534270 STK26Q9P289 416 aa31.9■■■□□ 2.7
RECQL4-206ENST00000534270 PTCH1Q13635 1447 aa31.9■■■□□ 2.7
RECQL4-206ENST00000534270 LRP6O75581 1613 aa31.89■■■□□ 2.7
RECQL4-206ENST00000534270 TMEM132EQ6IEE7 984 aa31.89■■■□□ 2.7
RECQL4-206ENST00000534270 SPATA31A6Q5VVP1 1343 aa31.88■■■□□ 2.69
RECQL4-206ENST00000534270 NUTM2BA6NNL0 878 aaPredicted RBP31.87■■■□□ 2.69
RECQL4-206ENST00000534270 NUTM2EB1AL46 878 aaPredicted RBP31.87■■■□□ 2.69
RECQL4-206ENST00000534270 NUTM2AQ8IVF1 878 aaPredicted RBP31.87■■■□□ 2.69
RECQL4-206ENST00000534270 ORAI2Q96SN7 254 aa31.86■■■□□ 2.69
RECQL4-206ENST00000534270 ANKRD30BQ9BXX2 1392 aa31.85■■■□□ 2.69
RECQL4-206ENST00000534270 WAPLQ7Z5K2 1190 aa31.85■■■□□ 2.69
RECQL4-206ENST00000534270 C1orf167Q5SNV9 1468 aa31.84■■■□□ 2.69
RECQL4-206ENST00000534270 MEX3CQ5U5Q3 659 aaKnown RBP31.84■■■□□ 2.69
RECQL4-206ENST00000534270 ACIN1Q9UKV3 1341 aaKnown RBP31.81■■■□□ 2.68
RECQL4-206ENST00000534270 PRAG1Q86YV5 1406 aa31.81■■■□□ 2.68
RECQL4-206ENST00000534270 LRRC59Q96AG4 307 aaKnown RBP31.8■■■□□ 2.68
RECQL4-206ENST00000534270 SHPRHQ149N8 1683 aa31.79■■■□□ 2.68
RECQL4-206ENST00000534270 IFT172Q9UG01 1749 aa31.78■■■□□ 2.68
RECQL4-206ENST00000534270 NHSL1Q5SYE7 1610 aa31.78■■■□□ 2.68
RECQL4-206ENST00000534270 PIK3C2GO75747 1445 aa31.76■■■□□ 2.68
RECQL4-206ENST00000534270 LRPPRCP42704 1394 aaKnown RBP31.76■■■□□ 2.67
RECQL4-206ENST00000534270 PLEKHH1Q9ULM0 1364 aa31.76■■■□□ 2.67
RECQL4-206ENST00000534270 CFAP70Q5T0N1 1121 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms