RNA–Protein interactions for RNA: ENST00000534207.5

CHID1-223, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,171 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-223ENST00000534207 RIMS2Q9UQ26 1411 aa26.14■■□□□ 1.77
CHID1-223ENST00000534207 SCAF11Q99590 1463 aaKnown RBP26.12■■□□□ 1.77
CHID1-223ENST00000534207 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.12■■□□□ 1.77
CHID1-223ENST00000534207 STAC3Q96MF2 364 aa26.12■■□□□ 1.77
CHID1-223ENST00000534207 MED14O60244 1454 aa26.11■■□□□ 1.77
CHID1-223ENST00000534207 MYOM2P54296 1465 aa26.11■■□□□ 1.77
CHID1-223ENST00000534207 SIN3AQ96ST3 1273 aa26.09■■□□□ 1.77
CHID1-223ENST00000534207 ZNF326Q5BKZ1 582 aaKnown RBP26.08■■□□□ 1.77
CHID1-223ENST00000534207 ANKLE2Q86XL3 938 aa26.08■■□□□ 1.77
CHID1-223ENST00000534207 EID1Q9Y6B2 187 aa26.08■■□□□ 1.77
CHID1-223ENST00000534207 IQGAP1P46940 1657 aa26.07■■□□□ 1.76
CHID1-223ENST00000534207 TIMELESSQ9UNS1 1208 aa26.06■■□□□ 1.76
CHID1-223ENST00000534207 HSPA2P54652 639 aa26.05■■□□□ 1.76
CHID1-223ENST00000534207 NRXN1Q9ULB1 1477 aa26.04■■□□□ 1.76
CHID1-223ENST00000534207 SETBP1Q9Y6X0 1596 aa26.04■■□□□ 1.76
CHID1-223ENST00000534207 VGFO15240 615 aaPredicted RBP26.04■■□□□ 1.76
CHID1-223ENST00000534207 PLEKHG1Q9ULL1 1385 aa26.04■■□□□ 1.76
CHID1-223ENST00000534207 RGL3Q3MIN7 710 aa26.03■■□□□ 1.76
CHID1-223ENST00000534207 TXNDC2Q86VQ3 553 aa26.03■■□□□ 1.76
CHID1-223ENST00000534207 DIP2AQ14689 1571 aa26.03■■□□□ 1.76
CHID1-223ENST00000534207 LAMC1P11047 1609 aa26.02■■□□□ 1.76
CHID1-223ENST00000534207 LTKP29376 864 aa26.01■■□□□ 1.75
CHID1-223ENST00000534207 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
CHID1-223ENST00000534207 TONSLQ96HA7 1378 aa26.01■■□□□ 1.75
CHID1-223ENST00000534207 NRXN3Q9Y4C0 1643 aa26.01■■□□□ 1.75
CHID1-223ENST00000534207 NPHP4O75161 1426 aaPredicted RBP26■■□□□ 1.75
CHID1-223ENST00000534207 KIAA1210Q9ULL0 1709 aa25.99■■□□□ 1.75
CHID1-223ENST00000534207 SETD1AO15047 1707 aaKnown RBP25.97■■□□□ 1.75
CHID1-223ENST00000534207 PPP1R15AO75807 674 aaPredicted RBP25.97■■□□□ 1.75
CHID1-223ENST00000534207 PIK3C2GO75747 1445 aa25.97■■□□□ 1.75
CHID1-223ENST00000534207 DMRT2Q9Y5R5 561 aa25.96■■□□□ 1.75
CHID1-223ENST00000534207 L3MBTL2Q969R5 705 aa25.95■■□□□ 1.74
CHID1-223ENST00000534207 NCKAP5LQ9HCH0 1330 aa25.94■■□□□ 1.74
CHID1-223ENST00000534207 DCAF11Q8TEB1 546 aa25.94■■□□□ 1.74
CHID1-223ENST00000534207 ADAMTS13Q76LX8 1427 aa25.91■■□□□ 1.74
CHID1-223ENST00000534207 ALKQ9UM73 1620 aa25.91■■□□□ 1.74
CHID1-223ENST00000534207 ADGRF5Q8IZF2 1346 aa25.9■■□□□ 1.74
CHID1-223ENST00000534207 PRAG1Q86YV5 1406 aa25.9■■□□□ 1.74
CHID1-223ENST00000534207 CHD2O14647 1828 aaKnown RBP25.88■■□□□ 1.73
CHID1-223ENST00000534207 PIK3R4Q99570 1358 aa25.87■■□□□ 1.73
CHID1-223ENST00000534207 NUTM2DQ5VT03 806 aaPredicted RBP25.87■■□□□ 1.73
CHID1-223ENST00000534207 TBX22Q9Y458 520 aa25.87■■□□□ 1.73
CHID1-223ENST00000534207 TRPM1Q7Z4N2 1603 aa25.87■■□□□ 1.73
CHID1-223ENST00000534207 NWD1Q149M9 1564 aa25.83■■□□□ 1.73
CHID1-223ENST00000534207 KDM2AQ9Y2K7 1162 aa25.83■■□□□ 1.73
CHID1-223ENST00000534207 C14orf93Q9H972 538 aaKnown RBP25.82■■□□□ 1.72
CHID1-223ENST00000534207 KNDC1Q76NI1 1749 aa25.81■■□□□ 1.72
CHID1-223ENST00000534207 XRN1Q8IZH2 1706 aaKnown RBP25.8■■□□□ 1.72
CHID1-223ENST00000534207 ADGRB1O14514 1584 aa25.79■■□□□ 1.72
CHID1-223ENST00000534207 BCANQ96GW7 911 aa25.79■■□□□ 1.72
CHID1-223ENST00000534207 ASXL1Q8IXJ9 1541 aa25.78■■□□□ 1.72
CHID1-223ENST00000534207 RALGAPBQ86X10 1494 aa25.77■■□□□ 1.72
CHID1-223ENST00000534207 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
CHID1-223ENST00000534207 STRCP1A6NGW2 1772 aa25.75■■□□□ 1.71
CHID1-223ENST00000534207 SLC26A8Q96RN1 970 aa25.75■■□□□ 1.71
CHID1-223ENST00000534207 NKTRP30414 1462 aaKnown RBP25.73■■□□□ 1.71
CHID1-223ENST00000534207 METP08581 1390 aa25.73■■□□□ 1.71
CHID1-223ENST00000534207 CFAP70Q5T0N1 1121 aa25.73■■□□□ 1.71
CHID1-223ENST00000534207 GPRASP1Q5JY77 1395 aa25.72■■□□□ 1.71
CHID1-223ENST00000534207 NBPF8Q3BBV2 869 aa25.72■■□□□ 1.71
CHID1-223ENST00000534207 TECPR2O15040 1411 aa25.71■■□□□ 1.71
CHID1-223ENST00000534207 CPS1P31327 1500 aa25.71■■□□□ 1.71
CHID1-223ENST00000534207 DLC1Q96QB1 1528 aa25.7■■□□□ 1.7
CHID1-223ENST00000534207 LRPPRCP42704 1394 aaKnown RBP25.69■■□□□ 1.7
CHID1-223ENST00000534207 KCNA6P17658 529 aa25.69■■□□□ 1.7
CHID1-223ENST00000534207 PTPRUQ92729 1446 aa25.69■■□□□ 1.7
CHID1-223ENST00000534207 YTHDC2Q9H6S0 1430 aaKnown RBP25.69■■□□□ 1.7
CHID1-223ENST00000534207 PTCH1Q13635 1447 aa25.68■■□□□ 1.7
CHID1-223ENST00000534207 ABCC11Q96J66 1382 aa25.68■■□□□ 1.7
CHID1-223ENST00000534207 ARHGEF28Q8N1W1 1705 aaKnown RBP25.67■■□□□ 1.7
CHID1-223ENST00000534207 LTBP4Q8N2S1 1624 aa25.66■■□□□ 1.7
CHID1-223ENST00000534207 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
CHID1-223ENST00000534207 ROCK2O75116 1388 aaKnown RBP25.65■■□□□ 1.7
CHID1-223ENST00000534207 SIRT1Q96EB6 747 aa25.63■■□□□ 1.69
CHID1-223ENST00000534207 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
CHID1-223ENST00000534207 AMOTL2Q9Y2J4 779 aa25.62■■□□□ 1.69
CHID1-223ENST00000534207 FAM135BQ49AJ0 1406 aa25.62■■□□□ 1.69
CHID1-223ENST00000534207 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
CHID1-223ENST00000534207 NBPF1Q3BBV0 1214 aa25.61■■□□□ 1.69
CHID1-223ENST00000534207 NCOA3Q9Y6Q9 1424 aa25.61■■□□□ 1.69
CHID1-223ENST00000534207 ZNF335Q9H4Z2 1342 aaPredicted RBP25.61■■□□□ 1.69
CHID1-223ENST00000534207 TMEM132EQ6IEE7 984 aa25.6■■□□□ 1.69
CHID1-223ENST00000534207 LRRC7Q96NW7 1537 aa25.56■■□□□ 1.68
CHID1-223ENST00000534207 IQSEC2Q5JU85 1478 aa25.55■■□□□ 1.68
CHID1-223ENST00000534207 EIF3AQ14152 1382 aaKnown RBP25.55■■□□□ 1.68
CHID1-223ENST00000534207 ROBO2Q9HCK4 1378 aa25.54■■□□□ 1.68
CHID1-223ENST00000534207 CARD11Q9BXL7 1154 aa25.53■■□□□ 1.68
CHID1-223ENST00000534207 QRICH2Q9H0J4 1663 aa25.52■■□□□ 1.68
CHID1-223ENST00000534207 NALCNQ8IZF0 1738 aa25.51■■□□□ 1.68
CHID1-223ENST00000534207 ADGRB2O60241 1585 aa25.51■■□□□ 1.67
CHID1-223ENST00000534207 STK26Q9P289 416 aa25.49■■□□□ 1.67
CHID1-223ENST00000534207 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.49■■□□□ 1.67
CHID1-223ENST00000534207 PROSER2Q86WR7 435 aaPredicted RBP25.48■■□□□ 1.67
CHID1-223ENST00000534207 TRAK1Q9UPV9 953 aa25.48■■□□□ 1.67
CHID1-223ENST00000534207 ADGRL3Q9HAR2 1447 aa25.47■■□□□ 1.67
CHID1-223ENST00000534207 TMEM94Q12767 1356 aa25.47■■□□□ 1.67
CHID1-223ENST00000534207 SBNO2Q9Y2G9 1366 aa25.46■■□□□ 1.67
CHID1-223ENST00000534207 DCCP43146 1447 aa25.46■■□□□ 1.67
CHID1-223ENST00000534207 CDC42BPGQ6DT37 1551 aa25.45■■□□□ 1.66
CHID1-223ENST00000534207 USP47Q96K76 1375 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms