RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 ADGRB3O60242 1522 aa17.15■□□□□ 0.34
CTSC-209ENST00000534131 CLSPNQ9HAW4 1339 aa17.14■□□□□ 0.33
CTSC-209ENST00000534131 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
CTSC-209ENST00000534131 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
CTSC-209ENST00000534131 TMEM131LA2VDJ0 1609 aa17.13■□□□□ 0.33
CTSC-209ENST00000534131 STRCQ7RTU9 1775 aa17.12■□□□□ 0.33
CTSC-209ENST00000534131 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
CTSC-209ENST00000534131 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
CTSC-209ENST00000534131 EID1Q9Y6B2 187 aa17.09■□□□□ 0.33
CTSC-209ENST00000534131 POLR1AO95602 1720 aaPredicted RBP17.08■□□□□ 0.32
CTSC-209ENST00000534131 RPGRIP1LQ68CZ1 1315 aa17.08■□□□□ 0.32
CTSC-209ENST00000534131 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTSC-209ENST00000534131 FBXO41Q8TF61 875 aa17.08■□□□□ 0.32
CTSC-209ENST00000534131 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
CTSC-209ENST00000534131 ANKLE2Q86XL3 938 aa17.06■□□□□ 0.32
CTSC-209ENST00000534131 PPLO60437 1756 aa17.05■□□□□ 0.32
CTSC-209ENST00000534131 PPP1R15AO75807 674 aaPredicted RBP17.05■□□□□ 0.32
CTSC-209ENST00000534131 SIN3AQ96ST3 1273 aa17.05■□□□□ 0.32
CTSC-209ENST00000534131 TMEM2Q9UHN6 1383 aa17.04■□□□□ 0.32
CTSC-209ENST00000534131 SLIT1O75093 1534 aa17.04■□□□□ 0.32
CTSC-209ENST00000534131 RIMS2Q9UQ26 1411 aa17.04■□□□□ 0.32
CTSC-209ENST00000534131 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
CTSC-209ENST00000534131 CERKQ8TCT0 537 aa17.03■□□□□ 0.32
CTSC-209ENST00000534131 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
CTSC-209ENST00000534131 IFT172Q9UG01 1749 aa17.03■□□□□ 0.32
CTSC-209ENST00000534131 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
CTSC-209ENST00000534131 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
CTSC-209ENST00000534131 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
CTSC-209ENST00000534131 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.31
CTSC-209ENST00000534131 BCANQ96GW7 911 aa17.01■□□□□ 0.31
CTSC-209ENST00000534131 NCKAP5LQ9HCH0 1330 aa17■□□□□ 0.31
CTSC-209ENST00000534131 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
CTSC-209ENST00000534131 NEXMIFQ5QGS0 1516 aa17■□□□□ 0.31
CTSC-209ENST00000534131 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CTSC-209ENST00000534131 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
CTSC-209ENST00000534131 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
CTSC-209ENST00000534131 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
CTSC-209ENST00000534131 NUTM2DQ5VT03 806 aaPredicted RBP16.97■□□□□ 0.31
CTSC-209ENST00000534131 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
CTSC-209ENST00000534131 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
CTSC-209ENST00000534131 LTKP29376 864 aa16.95■□□□□ 0.3
CTSC-209ENST00000534131 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
CTSC-209ENST00000534131 L3MBTL2Q969R5 705 aa16.94■□□□□ 0.3
CTSC-209ENST00000534131 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
CTSC-209ENST00000534131 MED14O60244 1454 aa16.93■□□□□ 0.3
CTSC-209ENST00000534131 MYOM2P54296 1465 aa16.93■□□□□ 0.3
CTSC-209ENST00000534131 LAMC1P11047 1609 aa16.9■□□□□ 0.3
CTSC-209ENST00000534131 DIP2AQ14689 1571 aa16.89■□□□□ 0.3
CTSC-209ENST00000534131 ADGRF5Q8IZF2 1346 aa16.89■□□□□ 0.29
CTSC-209ENST00000534131 SETBP1Q9Y6X0 1596 aa16.89■□□□□ 0.29
CTSC-209ENST00000534131 LTBP4Q8N2S1 1624 aa16.88■□□□□ 0.29
CTSC-209ENST00000534131 KIAA1210Q9ULL0 1709 aa16.87■□□□□ 0.29
CTSC-209ENST00000534131 TBX22Q9Y458 520 aa16.87■□□□□ 0.29
CTSC-209ENST00000534131 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
CTSC-209ENST00000534131 SLC26A8Q96RN1 970 aa16.86■□□□□ 0.29
CTSC-209ENST00000534131 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
CTSC-209ENST00000534131 ALKQ9UM73 1620 aa16.85■□□□□ 0.29
CTSC-209ENST00000534131 NRXN3Q9Y4C0 1643 aa16.85■□□□□ 0.29
CTSC-209ENST00000534131 PIK3C2GO75747 1445 aa16.85■□□□□ 0.29
CTSC-209ENST00000534131 CHD2O14647 1828 aaKnown RBP16.84■□□□□ 0.29
CTSC-209ENST00000534131 PRAG1Q86YV5 1406 aa16.83■□□□□ 0.28
CTSC-209ENST00000534131 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
CTSC-209ENST00000534131 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
CTSC-209ENST00000534131 C14orf93Q9H972 538 aaKnown RBP16.82■□□□□ 0.28
CTSC-209ENST00000534131 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
CTSC-209ENST00000534131 ADAMTS13Q76LX8 1427 aa16.81■□□□□ 0.28
CTSC-209ENST00000534131 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
CTSC-209ENST00000534131 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
CTSC-209ENST00000534131 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
CTSC-209ENST00000534131 KCNA6P17658 529 aa16.77■□□□□ 0.28
CTSC-209ENST00000534131 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
CTSC-209ENST00000534131 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
CTSC-209ENST00000534131 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
CTSC-209ENST00000534131 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
CTSC-209ENST00000534131 KNDC1Q76NI1 1749 aa16.75■□□□□ 0.27
CTSC-209ENST00000534131 METP08581 1390 aa16.75■□□□□ 0.27
CTSC-209ENST00000534131 RALGAPBQ86X10 1494 aa16.73■□□□□ 0.27
CTSC-209ENST00000534131 NWD1Q149M9 1564 aa16.73■□□□□ 0.27
CTSC-209ENST00000534131 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
CTSC-209ENST00000534131 STK26Q9P289 416 aa16.73■□□□□ 0.27
CTSC-209ENST00000534131 YTHDC2Q9H6S0 1430 aaKnown RBP16.72■□□□□ 0.27
CTSC-209ENST00000534131 CPS1P31327 1500 aa16.72■□□□□ 0.27
CTSC-209ENST00000534131 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
CTSC-209ENST00000534131 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
CTSC-209ENST00000534131 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
CTSC-209ENST00000534131 XRN1Q8IZH2 1706 aaKnown RBP16.71■□□□□ 0.27
CTSC-209ENST00000534131 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
CTSC-209ENST00000534131 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
CTSC-209ENST00000534131 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
CTSC-209ENST00000534131 ABCC11Q96J66 1382 aa16.7■□□□□ 0.26
CTSC-209ENST00000534131 PROSER2Q86WR7 435 aaPredicted RBP16.7■□□□□ 0.26
CTSC-209ENST00000534131 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
CTSC-209ENST00000534131 EIF3AQ14152 1382 aaKnown RBP16.69■□□□□ 0.26
CTSC-209ENST00000534131 TRAK1Q9UPV9 953 aa16.69■□□□□ 0.26
CTSC-209ENST00000534131 PTPRUQ92729 1446 aa16.69■□□□□ 0.26
CTSC-209ENST00000534131 ARHGEF28Q8N1W1 1705 aaKnown RBP16.68■□□□□ 0.26
CTSC-209ENST00000534131 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
CTSC-209ENST00000534131 POGKQ9P215 609 aa16.68■□□□□ 0.26
CTSC-209ENST00000534131 GPRASP1Q5JY77 1395 aa16.67■□□□□ 0.26
CTSC-209ENST00000534131 DLC1Q96QB1 1528 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms