RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
TTC39A-218ENST00000534098 RBM33Q96EV2 1170 aaKnown RBP18.28■□□□□ 0.52
TTC39A-218ENST00000534098 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.52
TTC39A-218ENST00000534098 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.52
TTC39A-218ENST00000534098 PHLPP1O60346 1717 aa18.26■□□□□ 0.51
TTC39A-218ENST00000534098 POTEAQ6S8J7 498 aa18.26■□□□□ 0.51
TTC39A-218ENST00000534098 ZFYVE9O95405 1425 aa18.25■□□□□ 0.51
TTC39A-218ENST00000534098 TMEM131LA2VDJ0 1609 aa18.24■□□□□ 0.51
TTC39A-218ENST00000534098 MSH6P52701 1360 aa18.24■□□□□ 0.51
TTC39A-218ENST00000534098 PLEKHG1Q9ULL1 1385 aa18.22■□□□□ 0.51
TTC39A-218ENST00000534098 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
TTC39A-218ENST00000534098 BCANQ96GW7 911 aa18.21■□□□□ 0.51
TTC39A-218ENST00000534098 RIMS2Q9UQ26 1411 aa18.21■□□□□ 0.51
TTC39A-218ENST00000534098 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
TTC39A-218ENST00000534098 COL16A1Q07092 1604 aaPredicted RBP18.2■□□□□ 0.5
TTC39A-218ENST00000534098 SLAIN2Q9P270 581 aa18.2■□□□□ 0.5
TTC39A-218ENST00000534098 UNC13BO14795 1591 aa18.2■□□□□ 0.5
TTC39A-218ENST00000534098 E9PCH4 1651 aa18.18■□□□□ 0.5
TTC39A-218ENST00000534098 JCADQ9P266 1359 aa18.17■□□□□ 0.5
TTC39A-218ENST00000534098 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.16■□□□□ 0.5
TTC39A-218ENST00000534098 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
TTC39A-218ENST00000534098 NCOA3Q9Y6Q9 1424 aa18.15■□□□□ 0.5
TTC39A-218ENST00000534098 HDGFP51858 240 aaKnown RBP18.15■□□□□ 0.5
TTC39A-218ENST00000534098 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
TTC39A-218ENST00000534098 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
TTC39A-218ENST00000534098 DIP2AQ14689 1571 aa18.15■□□□□ 0.5
TTC39A-218ENST00000534098 ADAMTS13Q76LX8 1427 aa18.14■□□□□ 0.49
TTC39A-218ENST00000534098 AHDC1Q5TGY3 1603 aaPredicted RBP18.12■□□□□ 0.49
TTC39A-218ENST00000534098 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
TTC39A-218ENST00000534098 LRP6O75581 1613 aa18.12■□□□□ 0.49
TTC39A-218ENST00000534098 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
TTC39A-218ENST00000534098 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.11■□□□□ 0.49
TTC39A-218ENST00000534098 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
TTC39A-218ENST00000534098 CHGAP10645 457 aaKnown RBP18.09■□□□□ 0.49
TTC39A-218ENST00000534098 TRPM2O94759 1503 aa18.08■□□□□ 0.49
TTC39A-218ENST00000534098 SPATA31A6Q5VVP1 1343 aa18.08■□□□□ 0.49
TTC39A-218ENST00000534098 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
TTC39A-218ENST00000534098 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
TTC39A-218ENST00000534098 CADPS2Q86UW7 1296 aa18.07■□□□□ 0.48
TTC39A-218ENST00000534098 C19orf44Q9H6X5 657 aa18.06■□□□□ 0.48
TTC39A-218ENST00000534098 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
TTC39A-218ENST00000534098 PTPRUQ92729 1446 aa18.05■□□□□ 0.48
TTC39A-218ENST00000534098 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
TTC39A-218ENST00000534098 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
TTC39A-218ENST00000534098 ATF3P18847 181 aa18.03■□□□□ 0.48
TTC39A-218ENST00000534098 DCCP43146 1447 aa18.02■□□□□ 0.48
TTC39A-218ENST00000534098 SPHKAPQ2M3C7 1700 aa18.02■□□□□ 0.48
TTC39A-218ENST00000534098 SETBP1Q9Y6X0 1596 aa18.01■□□□□ 0.47
TTC39A-218ENST00000534098 MEX3CQ5U5Q3 659 aaKnown RBP18.01■□□□□ 0.47
TTC39A-218ENST00000534098 ZNF772Q68DY9 489 aaPredicted RBP18.01■□□□□ 0.47
TTC39A-218ENST00000534098 AMOTL2Q9Y2J4 779 aa18.01■□□□□ 0.47
TTC39A-218ENST00000534098 NHSL1Q5SYE7 1610 aa18.01■□□□□ 0.47
TTC39A-218ENST00000534098 BRINP3Q76B58 766 aa18■□□□□ 0.47
TTC39A-218ENST00000534098 NUP155O75694 1391 aa18■□□□□ 0.47
TTC39A-218ENST00000534098 ASXL1Q8IXJ9 1541 aa17.99■□□□□ 0.47
TTC39A-218ENST00000534098 UPF1Q92900 1129 aaKnown RBP eCLIP17.97■□□□□ 0.47
TTC39A-218ENST00000534098 MST1RQ04912 1400 aa17.97■□□□□ 0.47
TTC39A-218ENST00000534098 TRIM52Q96A61 297 aa17.96■□□□□ 0.47
TTC39A-218ENST00000534098 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
TTC39A-218ENST00000534098 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
TTC39A-218ENST00000534098 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
TTC39A-218ENST00000534098 NUTM2BA6NNL0 878 aaPredicted RBP17.93■□□□□ 0.46
TTC39A-218ENST00000534098 NUTM2EB1AL46 878 aaPredicted RBP17.93■□□□□ 0.46
TTC39A-218ENST00000534098 RXRBP28702 533 aa17.93■□□□□ 0.46
TTC39A-218ENST00000534098 NUTM2AQ8IVF1 878 aaPredicted RBP17.93■□□□□ 0.46
TTC39A-218ENST00000534098 METP08581 1390 aa17.92■□□□□ 0.46
TTC39A-218ENST00000534098 NEXMIFQ5QGS0 1516 aa17.92■□□□□ 0.46
TTC39A-218ENST00000534098 CLTCL1P53675 1640 aa17.91■□□□□ 0.46
TTC39A-218ENST00000534098 ADGRL3Q9HAR2 1447 aa17.91■□□□□ 0.46
TTC39A-218ENST00000534098 KIF1BO60333 1816 aa17.91■□□□□ 0.46
TTC39A-218ENST00000534098 AFF2P51816 1311 aa17.9■□□□□ 0.46
TTC39A-218ENST00000534098 ITGAEP38570 1179 aa17.89■□□□□ 0.45
TTC39A-218ENST00000534098 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
TTC39A-218ENST00000534098 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
TTC39A-218ENST00000534098 LAMC1P11047 1609 aa17.87■□□□□ 0.45
TTC39A-218ENST00000534098 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
TTC39A-218ENST00000534098 DDX17Q92841 729 aaKnown RBP17.86■□□□□ 0.45
TTC39A-218ENST00000534098 RGS12O14924 1447 aa17.84■□□□□ 0.45
TTC39A-218ENST00000534098 C8orf37Q96NL8 207 aa17.83■□□□□ 0.44
TTC39A-218ENST00000534098 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
TTC39A-218ENST00000534098 PTCH1Q13635 1447 aa17.82■□□□□ 0.44
TTC39A-218ENST00000534098 QTRT2Q9H974 415 aaKnown RBP17.81■□□□□ 0.44
TTC39A-218ENST00000534098 RBM6P78332 1123 aaKnown RBP17.8■□□□□ 0.44
TTC39A-218ENST00000534098 PRAG1Q86YV5 1406 aa17.79■□□□□ 0.44
TTC39A-218ENST00000534098 PPLO60437 1756 aa17.78■□□□□ 0.44
TTC39A-218ENST00000534098 ROBO2Q9HCK4 1378 aa17.78■□□□□ 0.44
TTC39A-218ENST00000534098 SOS2Q07890 1332 aaPredicted RBP17.77■□□□□ 0.44
TTC39A-218ENST00000534098 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.44
TTC39A-218ENST00000534098 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
TTC39A-218ENST00000534098 NAIPQ13075 1403 aa17.76■□□□□ 0.43
TTC39A-218ENST00000534098 FOXD1Q16676 465 aa17.76■□□□□ 0.43
TTC39A-218ENST00000534098 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
TTC39A-218ENST00000534098 NGLY1Q96IV0 654 aa17.75■□□□□ 0.43
TTC39A-218ENST00000534098 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
TTC39A-218ENST00000534098 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
TTC39A-218ENST00000534098 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
TTC39A-218ENST00000534098 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
TTC39A-218ENST00000534098 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
TTC39A-218ENST00000534098 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
TTC39A-218ENST00000534098 RPGRIP1LQ68CZ1 1315 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms