RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 STRCP1A6NGW2 1772 aa28.5■■■□□ 2.15
LRRK1-210ENST00000534045 NAIPQ13075 1403 aa28.49■■■□□ 2.15
LRRK1-210ENST00000534045 SPHKAPQ2M3C7 1700 aa28.48■■■□□ 2.15
LRRK1-210ENST00000534045 RIMS2Q9UQ26 1411 aa28.47■■■□□ 2.15
LRRK1-210ENST00000534045 KCNA6P17658 529 aa28.46■■■□□ 2.15
LRRK1-210ENST00000534045 TMEM131LA2VDJ0 1609 aa28.46■■■□□ 2.15
LRRK1-210ENST00000534045 NUTM2DQ5VT03 806 aaPredicted RBP28.45■■■□□ 2.14
LRRK1-210ENST00000534045 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
LRRK1-210ENST00000534045 ZNF326Q5BKZ1 582 aaKnown RBP28.44■■■□□ 2.14
LRRK1-210ENST00000534045 PROSER2Q86WR7 435 aaPredicted RBP28.44■■■□□ 2.14
LRRK1-210ENST00000534045 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
LRRK1-210ENST00000534045 HFM1A2PYH4 1435 aa28.41■■■□□ 2.14
LRRK1-210ENST00000534045 PLEKHG1Q9ULL1 1385 aa28.4■■■□□ 2.14
LRRK1-210ENST00000534045 ZFYVE9O95405 1425 aa28.38■■■□□ 2.13
LRRK1-210ENST00000534045 HSPA1LP34931 641 aa28.37■■■□□ 2.13
LRRK1-210ENST00000534045 TBX22Q9Y458 520 aa28.37■■■□□ 2.13
LRRK1-210ENST00000534045 DISP3Q9P2K9 1392 aa28.37■■■□□ 2.13
LRRK1-210ENST00000534045 TMEM94Q12767 1356 aa28.33■■■□□ 2.13
LRRK1-210ENST00000534045 XIRP1Q702N8 1843 aaKnown RBP28.32■■■□□ 2.12
LRRK1-210ENST00000534045 RBM33Q96EV2 1170 aaKnown RBP28.32■■■□□ 2.12
LRRK1-210ENST00000534045 KIF1BO60333 1816 aa28.29■■■□□ 2.12
LRRK1-210ENST00000534045 C14orf37Q86TY3 774 aa28.27■■■□□ 2.12
LRRK1-210ENST00000534045 TRPM2O94759 1503 aa28.26■■■□□ 2.11
LRRK1-210ENST00000534045 CLTCL1P53675 1640 aa28.25■■■□□ 2.11
LRRK1-210ENST00000534045 NWD1Q149M9 1564 aa28.25■■■□□ 2.11
LRRK1-210ENST00000534045 ACIN1Q9UKV3 1341 aaKnown RBP28.24■■■□□ 2.11
LRRK1-210ENST00000534045 CHD2O14647 1828 aaKnown RBP28.24■■■□□ 2.11
LRRK1-210ENST00000534045 MSH6P52701 1360 aa28.23■■■□□ 2.11
LRRK1-210ENST00000534045 NKTRP30414 1462 aaKnown RBP28.22■■■□□ 2.11
LRRK1-210ENST00000534045 DIP2AQ14689 1571 aa28.22■■■□□ 2.11
LRRK1-210ENST00000534045 PIK3R4Q99570 1358 aa28.21■■■□□ 2.11
LRRK1-210ENST00000534045 MPHOSPH9Q99550 1183 aa28.2■■■□□ 2.1
LRRK1-210ENST00000534045 AMOTL2Q9Y2J4 779 aa28.2■■■□□ 2.1
LRRK1-210ENST00000534045 ALKQ9UM73 1620 aa28.2■■■□□ 2.1
LRRK1-210ENST00000534045 ADAMTS13Q76LX8 1427 aa28.19■■■□□ 2.1
LRRK1-210ENST00000534045 VGFO15240 615 aaPredicted RBP28.19■■■□□ 2.1
LRRK1-210ENST00000534045 FOXD1Q16676 465 aa28.19■■■□□ 2.1
LRRK1-210ENST00000534045 SLAIN2Q9P270 581 aa28.14■■■□□ 2.1
LRRK1-210ENST00000534045 RPGRIP1LQ68CZ1 1315 aa28.14■■■□□ 2.09
LRRK1-210ENST00000534045 SETD5Q9C0A6 1442 aa28.13■■■□□ 2.09
LRRK1-210ENST00000534045 ATF3P18847 181 aa28.12■■■□□ 2.09
LRRK1-210ENST00000534045 FAM135BQ49AJ0 1406 aa28.11■■■□□ 2.09
LRRK1-210ENST00000534045 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
LRRK1-210ENST00000534045 NCOA3Q9Y6Q9 1424 aa28.1■■■□□ 2.09
LRRK1-210ENST00000534045 NEXMIFQ5QGS0 1516 aa28.09■■■□□ 2.09
LRRK1-210ENST00000534045 RGL3Q3MIN7 710 aa28.09■■■□□ 2.09
LRRK1-210ENST00000534045 CADPS2Q86UW7 1296 aa28.09■■■□□ 2.09
LRRK1-210ENST00000534045 NRXN3Q9Y4C0 1643 aa28.09■■■□□ 2.09
LRRK1-210ENST00000534045 SETBP1Q9Y6X0 1596 aa28.08■■■□□ 2.09
LRRK1-210ENST00000534045 CCDC144AA2RUR9 1427 aa28.08■■■□□ 2.09
LRRK1-210ENST00000534045 PHF23Q9BUL5 403 aaPredicted RBP28.06■■■□□ 2.08
LRRK1-210ENST00000534045 METP08581 1390 aa28.04■■■□□ 2.08
LRRK1-210ENST00000534045 ILDR2Q71H61 639 aa28.04■■■□□ 2.08
LRRK1-210ENST00000534045 PTPRUQ92729 1446 aa28.03■■■□□ 2.08
LRRK1-210ENST00000534045 PPLO60437 1756 aa28.03■■■□□ 2.08
LRRK1-210ENST00000534045 RAB3GAP2Q9H2M9 1393 aa28■■■□□ 2.07
LRRK1-210ENST00000534045 XRN1Q8IZH2 1706 aaKnown RBP27.99■■■□□ 2.07
LRRK1-210ENST00000534045 ROBO1Q9Y6N7 1651 aa27.98■■■□□ 2.07
LRRK1-210ENST00000534045 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.94■■■□□ 2.06
LRRK1-210ENST00000534045 SETD1AO15047 1707 aaKnown RBP27.92■■■□□ 2.06
LRRK1-210ENST00000534045 IFT172Q9UG01 1749 aa27.92■■■□□ 2.06
LRRK1-210ENST00000534045 MED1Q15648 1581 aaPredicted RBP27.92■■■□□ 2.06
LRRK1-210ENST00000534045 ANKRD30BQ9BXX2 1392 aa27.92■■■□□ 2.06
LRRK1-210ENST00000534045 ADGRF5Q8IZF2 1346 aa27.91■■■□□ 2.06
LRRK1-210ENST00000534045 HRCP23327 699 aa27.88■■■□□ 2.05
LRRK1-210ENST00000534045 SOCS7O14512 581 aa27.87■■■□□ 2.05
LRRK1-210ENST00000534045 SPATA31E1Q6ZUB1 1445 aa27.86■■■□□ 2.05
LRRK1-210ENST00000534045 DCCP43146 1447 aa27.85■■■□□ 2.05
LRRK1-210ENST00000534045 PHLPP1O60346 1717 aa27.85■■■□□ 2.05
LRRK1-210ENST00000534045 STK26Q9P289 416 aa27.85■■■□□ 2.05
LRRK1-210ENST00000534045 BRINP3Q76B58 766 aa27.84■■■□□ 2.05
LRRK1-210ENST00000534045 NALCNQ8IZF0 1738 aa27.82■■■□□ 2.04
LRRK1-210ENST00000534045 JCADQ9P266 1359 aa27.82■■■□□ 2.04
LRRK1-210ENST00000534045 ADGRL3Q9HAR2 1447 aa27.81■■■□□ 2.04
LRRK1-210ENST00000534045 ROBO2Q9HCK4 1378 aa27.8■■■□□ 2.04
LRRK1-210ENST00000534045 TMEM132EQ6IEE7 984 aa27.79■■■□□ 2.04
LRRK1-210ENST00000534045 PTCH1Q13635 1447 aa27.78■■■□□ 2.04
LRRK1-210ENST00000534045 MST1RQ04912 1400 aa27.75■■■□□ 2.03
LRRK1-210ENST00000534045 MEX3CQ5U5Q3 659 aaKnown RBP27.73■■■□□ 2.03
LRRK1-210ENST00000534045 C14orf93Q9H972 538 aaKnown RBP27.73■■■□□ 2.03
LRRK1-210ENST00000534045 LRRC59Q96AG4 307 aaKnown RBP27.72■■■□□ 2.03
LRRK1-210ENST00000534045 KDM2AQ9Y2K7 1162 aa27.72■■■□□ 2.03
LRRK1-210ENST00000534045 SPATA31A6Q5VVP1 1343 aa27.71■■■□□ 2.03
LRRK1-210ENST00000534045 WAPLQ7Z5K2 1190 aa27.71■■■□□ 2.03
LRRK1-210ENST00000534045 LRPPRCP42704 1394 aaKnown RBP27.71■■■□□ 2.03
LRRK1-210ENST00000534045 COL16A1Q07092 1604 aaPredicted RBP27.7■■■□□ 2.03
LRRK1-210ENST00000534045 PIK3C2GO75747 1445 aa27.7■■■□□ 2.03
LRRK1-210ENST00000534045 CFAP70Q5T0N1 1121 aa27.7■■■□□ 2.02
LRRK1-210ENST00000534045 LAMC1P11047 1609 aa27.7■■■□□ 2.02
LRRK1-210ENST00000534045 DCAF11Q8TEB1 546 aa27.69■■■□□ 2.02
LRRK1-210ENST00000534045 AHDC1Q5TGY3 1603 aaPredicted RBP27.69■■■□□ 2.02
LRRK1-210ENST00000534045 DHX57Q6P158 1386 aaKnown RBP27.69■■■□□ 2.02
LRRK1-210ENST00000534045 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
LRRK1-210ENST00000534045 KNDC1Q76NI1 1749 aa27.69■■■□□ 2.02
LRRK1-210ENST00000534045 PRAG1Q86YV5 1406 aa27.68■■■□□ 2.02
LRRK1-210ENST00000534045 NUTM2BA6NNL0 878 aaPredicted RBP27.67■■■□□ 2.02
LRRK1-210ENST00000534045 NUTM2EB1AL46 878 aaPredicted RBP27.67■■■□□ 2.02
LRRK1-210ENST00000534045 NUTM2AQ8IVF1 878 aaPredicted RBP27.67■■■□□ 2.02
LRRK1-210ENST00000534045 RGS17Q9UGC6 210 aaPredicted RBP27.67■■■□□ 2.02
LRRK1-210ENST00000534045 ASXL1Q8IXJ9 1541 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms