RNA–Protein interactions for RNA: ENST00000534018.5

GSDMD-215, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-215ENST00000534018 E9PCH4 1651 aa25.59■■□□□ 1.69
GSDMD-215ENST00000534018 KCNA6P17658 529 aa25.59■■□□□ 1.69
GSDMD-215ENST00000534018 SLC52A1Q9NWF4 448 aa25.59■■□□□ 1.69
GSDMD-215ENST00000534018 RBM33Q96EV2 1170 aaKnown RBP25.58■■□□□ 1.69
GSDMD-215ENST00000534018 NKTRP30414 1462 aaKnown RBP25.58■■□□□ 1.69
GSDMD-215ENST00000534018 CHD2O14647 1828 aaKnown RBP25.58■■□□□ 1.68
GSDMD-215ENST00000534018 BCANQ96GW7 911 aa25.56■■□□□ 1.68
GSDMD-215ENST00000534018 ZFYVE9O95405 1425 aa25.55■■□□□ 1.68
GSDMD-215ENST00000534018 FAM135BQ49AJ0 1406 aa25.55■■□□□ 1.68
GSDMD-215ENST00000534018 PROSER2Q86WR7 435 aaPredicted RBP25.55■■□□□ 1.68
GSDMD-215ENST00000534018 IQGAP3Q86VI3 1631 aa25.53■■□□□ 1.68
GSDMD-215ENST00000534018 RIMS2Q9UQ26 1411 aa25.52■■□□□ 1.68
GSDMD-215ENST00000534018 PLEKHG1Q9ULL1 1385 aa25.51■■□□□ 1.67
GSDMD-215ENST00000534018 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
GSDMD-215ENST00000534018 PHLPP1O60346 1717 aa25.49■■□□□ 1.67
GSDMD-215ENST00000534018 MSH6P52701 1360 aa25.47■■□□□ 1.67
GSDMD-215ENST00000534018 ROCK1Q13464 1354 aa25.45■■□□□ 1.67
GSDMD-215ENST00000534018 CHGAP10645 457 aaKnown RBP25.45■■□□□ 1.66
GSDMD-215ENST00000534018 RGS17Q9UGC6 210 aaPredicted RBP25.45■■□□□ 1.66
GSDMD-215ENST00000534018 HDGFP51858 240 aaKnown RBP25.42■■□□□ 1.66
GSDMD-215ENST00000534018 DIP2AQ14689 1571 aa25.42■■□□□ 1.66
GSDMD-215ENST00000534018 NUTM2DQ5VT03 806 aaPredicted RBP25.41■■□□□ 1.66
GSDMD-215ENST00000534018 SPHKAPQ2M3C7 1700 aa25.4■■□□□ 1.66
GSDMD-215ENST00000534018 ITGAEP38570 1179 aa25.39■■□□□ 1.66
GSDMD-215ENST00000534018 ADAMTS13Q76LX8 1427 aa25.38■■□□□ 1.65
GSDMD-215ENST00000534018 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.38■■□□□ 1.65
GSDMD-215ENST00000534018 NUP155O75694 1391 aa25.37■■□□□ 1.65
GSDMD-215ENST00000534018 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.37■■□□□ 1.65
GSDMD-215ENST00000534018 SLAIN2Q9P270 581 aa25.37■■□□□ 1.65
GSDMD-215ENST00000534018 TBX22Q9Y458 520 aa25.36■■□□□ 1.65
GSDMD-215ENST00000534018 COL16A1Q07092 1604 aaPredicted RBP25.36■■□□□ 1.65
GSDMD-215ENST00000534018 TRPM2O94759 1503 aa25.34■■□□□ 1.65
GSDMD-215ENST00000534018 PPARGC1BQ86YN6 1023 aaKnown RBP25.33■■□□□ 1.65
GSDMD-215ENST00000534018 C14orf37Q86TY3 774 aa25.32■■□□□ 1.64
GSDMD-215ENST00000534018 NCOA3Q9Y6Q9 1424 aa25.31■■□□□ 1.64
GSDMD-215ENST00000534018 NRXN3Q9Y4C0 1643 aa25.31■■□□□ 1.64
GSDMD-215ENST00000534018 POTEAQ6S8J7 498 aa25.3■■□□□ 1.64
GSDMD-215ENST00000534018 PIK3R4Q99570 1358 aa25.3■■□□□ 1.64
GSDMD-215ENST00000534018 JCADQ9P266 1359 aa25.29■■□□□ 1.64
GSDMD-215ENST00000534018 SETD1AO15047 1707 aaKnown RBP25.29■■□□□ 1.64
GSDMD-215ENST00000534018 XRN1Q8IZH2 1706 aaKnown RBP25.27■■□□□ 1.64
GSDMD-215ENST00000534018 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
GSDMD-215ENST00000534018 SETBP1Q9Y6X0 1596 aa25.25■■□□□ 1.63
GSDMD-215ENST00000534018 AHDC1Q5TGY3 1603 aaPredicted RBP25.25■■□□□ 1.63
GSDMD-215ENST00000534018 SHPRHQ149N8 1683 aa25.24■■□□□ 1.63
GSDMD-215ENST00000534018 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
GSDMD-215ENST00000534018 KIF1BO60333 1816 aa25.23■■□□□ 1.63
GSDMD-215ENST00000534018 ATF3P18847 181 aa25.22■■□□□ 1.63
GSDMD-215ENST00000534018 CADPS2Q86UW7 1296 aa25.22■■□□□ 1.63
GSDMD-215ENST00000534018 C19orf44Q9H6X5 657 aa25.22■■□□□ 1.63
GSDMD-215ENST00000534018 AMOTL2Q9Y2J4 779 aa25.22■■□□□ 1.63
GSDMD-215ENST00000534018 LRP6O75581 1613 aa25.21■■□□□ 1.63
GSDMD-215ENST00000534018 ZNF326Q5BKZ1 582 aaKnown RBP25.18■■□□□ 1.62
GSDMD-215ENST00000534018 NEXMIFQ5QGS0 1516 aa25.17■■□□□ 1.62
GSDMD-215ENST00000534018 NALCNQ8IZF0 1738 aa25.15■■□□□ 1.62
GSDMD-215ENST00000534018 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
GSDMD-215ENST00000534018 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
GSDMD-215ENST00000534018 SPATA31A6Q5VVP1 1343 aa25.14■■□□□ 1.62
GSDMD-215ENST00000534018 DCCP43146 1447 aa25.14■■□□□ 1.62
GSDMD-215ENST00000534018 ASXL1Q8IXJ9 1541 aa25.14■■□□□ 1.62
GSDMD-215ENST00000534018 METP08581 1390 aa25.13■■□□□ 1.61
GSDMD-215ENST00000534018 MEX3CQ5U5Q3 659 aaKnown RBP25.12■■□□□ 1.61
GSDMD-215ENST00000534018 BRINP3Q76B58 766 aa25.12■■□□□ 1.61
GSDMD-215ENST00000534018 MST1RQ04912 1400 aa25.1■■□□□ 1.61
GSDMD-215ENST00000534018 NAIPQ13075 1403 aa25.1■■□□□ 1.61
GSDMD-215ENST00000534018 ADGRL3Q9HAR2 1447 aa25.05■■□□□ 1.6
GSDMD-215ENST00000534018 PPLO60437 1756 aa25.03■■□□□ 1.6
GSDMD-215ENST00000534018 NUTM2BA6NNL0 878 aaPredicted RBP25.03■■□□□ 1.6
GSDMD-215ENST00000534018 NUTM2EB1AL46 878 aaPredicted RBP25.03■■□□□ 1.6
GSDMD-215ENST00000534018 NUTM2AQ8IVF1 878 aaPredicted RBP25.03■■□□□ 1.6
GSDMD-215ENST00000534018 ZNF772Q68DY9 489 aaPredicted RBP25.02■■□□□ 1.6
GSDMD-215ENST00000534018 SETD5Q9C0A6 1442 aa25.01■■□□□ 1.59
GSDMD-215ENST00000534018 TRIM52Q96A61 297 aa24.99■■□□□ 1.59
GSDMD-215ENST00000534018 HFM1A2PYH4 1435 aa24.98■■□□□ 1.59
GSDMD-215ENST00000534018 DDX17Q92841 729 aaKnown RBP24.97■■□□□ 1.59
GSDMD-215ENST00000534018 PTCH1Q13635 1447 aa24.96■■□□□ 1.59
GSDMD-215ENST00000534018 LAMC1P11047 1609 aa24.94■■□□□ 1.58
GSDMD-215ENST00000534018 C1orf167Q5SNV9 1468 aa24.94■■□□□ 1.58
GSDMD-215ENST00000534018 LRRC59Q96AG4 307 aaKnown RBP24.93■■□□□ 1.58
GSDMD-215ENST00000534018 ROBO2Q9HCK4 1378 aa24.93■■□□□ 1.58
GSDMD-215ENST00000534018 AFF2P51816 1311 aa24.92■■□□□ 1.58
GSDMD-215ENST00000534018 VGFO15240 615 aaPredicted RBP24.92■■□□□ 1.58
GSDMD-215ENST00000534018 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
GSDMD-215ENST00000534018 SLC4A1APQ9BWU0 796 aaKnown RBP24.91■■□□□ 1.58
GSDMD-215ENST00000534018 RXRBP28702 533 aa24.9■■□□□ 1.58
GSDMD-215ENST00000534018 C8orf37Q96NL8 207 aa24.88■■□□□ 1.57
GSDMD-215ENST00000534018 IFT172Q9UG01 1749 aa24.88■■□□□ 1.57
GSDMD-215ENST00000534018 CDK12Q9NYV4 1490 aaPredicted RBP24.88■■□□□ 1.57
GSDMD-215ENST00000534018 PRAG1Q86YV5 1406 aa24.87■■□□□ 1.57
GSDMD-215ENST00000534018 RPGRIP1LQ68CZ1 1315 aa24.86■■□□□ 1.57
GSDMD-215ENST00000534018 UPF1Q92900 1129 aaKnown RBP eCLIP24.86■■□□□ 1.57
GSDMD-215ENST00000534018 FOXD1Q16676 465 aa24.84■■□□□ 1.57
GSDMD-215ENST00000534018 ORAI2Q96SN7 254 aa24.84■■□□□ 1.57
GSDMD-215ENST00000534018 CDC42BPGQ6DT37 1551 aa24.83■■□□□ 1.57
GSDMD-215ENST00000534018 RGS12O14924 1447 aa24.81■■□□□ 1.56
GSDMD-215ENST00000534018 COL22A1Q8NFW1 1626 aaPredicted RBP24.81■■□□□ 1.56
GSDMD-215ENST00000534018 ADAMTS2O95450 1211 aa24.8■■□□□ 1.56
GSDMD-215ENST00000534018 CCDC144AA2RUR9 1427 aa24.79■■□□□ 1.56
GSDMD-215ENST00000534018 SOS2Q07890 1332 aaPredicted RBP24.79■■□□□ 1.56
GSDMD-215ENST00000534018 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms