RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 LMTK2Q8IWU2 1503 aa14.51□□□□□ -0.09
PACS1-214ENST00000533811 ANKRD30AQ9BXX3 1397 aa14.51□□□□□ -0.09
PACS1-214ENST00000533811 PPP1R15AO75807 674 aaPredicted RBP14.51□□□□□ -0.09
PACS1-214ENST00000533811 SLAIN2Q9P270 581 aa14.51□□□□□ -0.09
PACS1-214ENST00000533811 APLP2Q06481 763 aa14.5□□□□□ -0.09
PACS1-214ENST00000533811 MEX3CQ5U5Q3 659 aaKnown RBP14.5□□□□□ -0.09
PACS1-214ENST00000533811 C14orf37Q86TY3 774 aa14.5□□□□□ -0.09
PACS1-214ENST00000533811 CHD2O14647 1828 aaKnown RBP14.5□□□□□ -0.09
PACS1-214ENST00000533811 NOS1P29475 1434 aa14.49□□□□□ -0.09
PACS1-214ENST00000533811 GCC2Q8IWJ2 1684 aa14.49□□□□□ -0.09
PACS1-214ENST00000533811 COL16A1Q07092 1604 aaPredicted RBP14.48□□□□□ -0.09
PACS1-214ENST00000533811 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
PACS1-214ENST00000533811 FGD6Q6ZV73 1430 aa14.48□□□□□ -0.09
PACS1-214ENST00000533811 SLC52A1Q9NWF4 448 aa14.47□□□□□ -0.09
PACS1-214ENST00000533811 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.09
PACS1-214ENST00000533811 RIMS2Q9UQ26 1411 aa14.46□□□□□ -0.09
PACS1-214ENST00000533811 PLEKHG1Q9ULL1 1385 aa14.46□□□□□ -0.1
PACS1-214ENST00000533811 LRP6O75581 1613 aa14.45□□□□□ -0.1
PACS1-214ENST00000533811 ZFYVE9O95405 1425 aa14.44□□□□□ -0.1
PACS1-214ENST00000533811 HDGFP51858 240 aaKnown RBP14.43□□□□□ -0.1
PACS1-214ENST00000533811 NUTM2DQ5VT03 806 aaPredicted RBP14.43□□□□□ -0.1
PACS1-214ENST00000533811 ZNF772Q68DY9 489 aaPredicted RBP14.43□□□□□ -0.1
PACS1-214ENST00000533811 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.43□□□□□ -0.1
PACS1-214ENST00000533811 SPATA31A6Q5VVP1 1343 aa14.42□□□□□ -0.1
PACS1-214ENST00000533811 TMEM131LA2VDJ0 1609 aa14.42□□□□□ -0.1
PACS1-214ENST00000533811 FAM50AQ14320 339 aaKnown RBP14.42□□□□□ -0.1
PACS1-214ENST00000533811 UPF1Q92900 1129 aaKnown RBP eCLIP14.42□□□□□ -0.1
PACS1-214ENST00000533811 RPRD2Q5VT52 1461 aaKnown RBP14.42□□□□□ -0.1
PACS1-214ENST00000533811 NUTM2BA6NNL0 878 aaPredicted RBP14.41□□□□□ -0.1
PACS1-214ENST00000533811 NUTM2EB1AL46 878 aaPredicted RBP14.41□□□□□ -0.1
PACS1-214ENST00000533811 ATF3P18847 181 aa14.41□□□□□ -0.1
PACS1-214ENST00000533811 NUTM2AQ8IVF1 878 aaPredicted RBP14.41□□□□□ -0.1
PACS1-214ENST00000533811 SHPRHQ149N8 1683 aa14.41□□□□□ -0.1
PACS1-214ENST00000533811 TBX22Q9Y458 520 aa14.4□□□□□ -0.1
PACS1-214ENST00000533811 AHDC1Q5TGY3 1603 aaPredicted RBP14.4□□□□□ -0.1
PACS1-214ENST00000533811 ANKRD50Q9ULJ7 1429 aa14.4□□□□□ -0.1
PACS1-214ENST00000533811 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
PACS1-214ENST00000533811 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
PACS1-214ENST00000533811 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.39□□□□□ -0.11
PACS1-214ENST00000533811 NCOA3Q9Y6Q9 1424 aa14.38□□□□□ -0.11
PACS1-214ENST00000533811 RXRBP28702 533 aa14.37□□□□□ -0.11
PACS1-214ENST00000533811 C19orf44Q9H6X5 657 aa14.37□□□□□ -0.11
PACS1-214ENST00000533811 DIP2AQ14689 1571 aa14.37□□□□□ -0.11
PACS1-214ENST00000533811 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
PACS1-214ENST00000533811 E9PCH4 1651 aa14.36□□□□□ -0.11
PACS1-214ENST00000533811 TRPM2O94759 1503 aa14.35□□□□□ -0.11
PACS1-214ENST00000533811 BRINP3Q76B58 766 aa14.34□□□□□ -0.11
PACS1-214ENST00000533811 AMOTL2Q9Y2J4 779 aa14.34□□□□□ -0.11
PACS1-214ENST00000533811 AFF2P51816 1311 aa14.34□□□□□ -0.11
PACS1-214ENST00000533811 UNC13BO14795 1591 aa14.34□□□□□ -0.11
PACS1-214ENST00000533811 PIK3R4Q99570 1358 aa14.33□□□□□ -0.12
PACS1-214ENST00000533811 PTPRUQ92729 1446 aa14.32□□□□□ -0.12
PACS1-214ENST00000533811 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
PACS1-214ENST00000533811 C8orf37Q96NL8 207 aa14.3□□□□□ -0.12
PACS1-214ENST00000533811 CDK12Q9NYV4 1490 aaPredicted RBP14.3□□□□□ -0.12
PACS1-214ENST00000533811 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
PACS1-214ENST00000533811 IQGAP3Q86VI3 1631 aa14.29□□□□□ -0.12
PACS1-214ENST00000533811 DCCP43146 1447 aa14.28□□□□□ -0.12
PACS1-214ENST00000533811 XRN1Q8IZH2 1706 aaKnown RBP14.28□□□□□ -0.12
PACS1-214ENST00000533811 RGS12O14924 1447 aa14.27□□□□□ -0.12
PACS1-214ENST00000533811 MST1RQ04912 1400 aa14.27□□□□□ -0.12
PACS1-214ENST00000533811 SETD5Q9C0A6 1442 aa14.27□□□□□ -0.12
PACS1-214ENST00000533811 ZNF326Q5BKZ1 582 aaKnown RBP14.27□□□□□ -0.13
PACS1-214ENST00000533811 DDX17Q92841 729 aaKnown RBP14.27□□□□□ -0.13
PACS1-214ENST00000533811 NRXN3Q9Y4C0 1643 aa14.26□□□□□ -0.13
PACS1-214ENST00000533811 LRRC59Q96AG4 307 aaKnown RBP14.26□□□□□ -0.13
PACS1-214ENST00000533811 QTRT2Q9H974 415 aaKnown RBP14.26□□□□□ -0.13
PACS1-214ENST00000533811 NUP155O75694 1391 aa14.25□□□□□ -0.13
PACS1-214ENST00000533811 ADAMTS2O95450 1211 aa14.24□□□□□ -0.13
PACS1-214ENST00000533811 RBM6P78332 1123 aaKnown RBP14.24□□□□□ -0.13
PACS1-214ENST00000533811 SPHKAPQ2M3C7 1700 aa14.24□□□□□ -0.13
PACS1-214ENST00000533811 NALCNQ8IZF0 1738 aa14.24□□□□□ -0.13
PACS1-214ENST00000533811 PNPLA6Q8IY17 1366 aa14.23□□□□□ -0.13
PACS1-214ENST00000533811 SETBP1Q9Y6X0 1596 aa14.23□□□□□ -0.13
PACS1-214ENST00000533811 ITGAEP38570 1179 aa14.23□□□□□ -0.13
PACS1-214ENST00000533811 NGLY1Q96IV0 654 aa14.23□□□□□ -0.13
PACS1-214ENST00000533811 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
PACS1-214ENST00000533811 METP08581 1390 aa14.22□□□□□ -0.13
PACS1-214ENST00000533811 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
PACS1-214ENST00000533811 ATAD2Q6PL18 1390 aa14.18□□□□□ -0.14
PACS1-214ENST00000533811 USP21Q9UK80 565 aa14.17□□□□□ -0.14
PACS1-214ENST00000533811 C1orf167Q5SNV9 1468 aa14.17□□□□□ -0.14
PACS1-214ENST00000533811 KIF1BO60333 1816 aa14.16□□□□□ -0.14
PACS1-214ENST00000533811 NEXMIFQ5QGS0 1516 aa14.15□□□□□ -0.14
PACS1-214ENST00000533811 CLTCL1P53675 1640 aa14.15□□□□□ -0.14
PACS1-214ENST00000533811 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
PACS1-214ENST00000533811 TRPC5Q9UL62 973 aaPredicted RBP14.14□□□□□ -0.15
PACS1-214ENST00000533811 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
PACS1-214ENST00000533811 FOXD1Q16676 465 aa14.12□□□□□ -0.15
PACS1-214ENST00000533811 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
PACS1-214ENST00000533811 LAMC1P11047 1609 aa14.12□□□□□ -0.15
PACS1-214ENST00000533811 PTCH1Q13635 1447 aa14.11□□□□□ -0.15
PACS1-214ENST00000533811 ROBO2Q9HCK4 1378 aa14.1□□□□□ -0.15
PACS1-214ENST00000533811 ATRNO75882 1429 aa14.1□□□□□ -0.15
PACS1-214ENST00000533811 PPARGC1BQ86YN6 1023 aaKnown RBP14.1□□□□□ -0.15
PACS1-214ENST00000533811 COL22A1Q8NFW1 1626 aaPredicted RBP14.08□□□□□ -0.15
PACS1-214ENST00000533811 MARF1Q9Y4F3 1742 aaKnown RBP14.08□□□□□ -0.16
PACS1-214ENST00000533811 FNBP4Q8N3X1 1017 aaPredicted RBP14.08□□□□□ -0.16
PACS1-214ENST00000533811 SRCAPQ6ZRS2 3230 aa14.07□□□□□ -0.16
PACS1-214ENST00000533811 XPCQ01831 940 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms