RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 NRXN1Q9ULB1 1477 aa17.81■□□□□ 0.44
SYVN1-215ENST00000533685 CHGAP10645 457 aaKnown RBP17.8■□□□□ 0.44
SYVN1-215ENST00000533685 IFT172Q9UG01 1749 aa17.8■□□□□ 0.44
SYVN1-215ENST00000533685 VGFO15240 615 aaPredicted RBP17.79■□□□□ 0.44
SYVN1-215ENST00000533685 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
SYVN1-215ENST00000533685 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
SYVN1-215ENST00000533685 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
SYVN1-215ENST00000533685 PPP1R15AO75807 674 aaPredicted RBP17.78■□□□□ 0.44
SYVN1-215ENST00000533685 DCAF11Q8TEB1 546 aa17.78■□□□□ 0.44
SYVN1-215ENST00000533685 RIMS2Q9UQ26 1411 aa17.78■□□□□ 0.44
SYVN1-215ENST00000533685 PPLO60437 1756 aa17.78■□□□□ 0.44
SYVN1-215ENST00000533685 PRAG1Q86YV5 1406 aa17.76■□□□□ 0.43
SYVN1-215ENST00000533685 LMTK3Q96Q04 1460 aa17.75■□□□□ 0.43
SYVN1-215ENST00000533685 MYO5BQ9ULV0 1848 aa17.75■□□□□ 0.43
SYVN1-215ENST00000533685 PIK3C2GO75747 1445 aa17.74■□□□□ 0.43
SYVN1-215ENST00000533685 EID1Q9Y6B2 187 aa17.74■□□□□ 0.43
SYVN1-215ENST00000533685 SCAF11Q99590 1463 aaKnown RBP17.73■□□□□ 0.43
SYVN1-215ENST00000533685 PLEKHG1Q9ULL1 1385 aa17.72■□□□□ 0.43
SYVN1-215ENST00000533685 SETBP1Q9Y6X0 1596 aa17.7■□□□□ 0.42
SYVN1-215ENST00000533685 MED14O60244 1454 aa17.7■□□□□ 0.42
SYVN1-215ENST00000533685 ANKLE2Q86XL3 938 aa17.7■□□□□ 0.42
SYVN1-215ENST00000533685 ADGRF5Q8IZF2 1346 aa17.7■□□□□ 0.42
SYVN1-215ENST00000533685 RALGAPBQ86X10 1494 aa17.69■□□□□ 0.42
SYVN1-215ENST00000533685 KIAA1210Q9ULL0 1709 aa17.69■□□□□ 0.42
SYVN1-215ENST00000533685 LAMC1P11047 1609 aa17.69■□□□□ 0.42
SYVN1-215ENST00000533685 LTKP29376 864 aa17.68■□□□□ 0.42
SYVN1-215ENST00000533685 TXNDC2Q86VQ3 553 aa17.68■□□□□ 0.42
SYVN1-215ENST00000533685 KDM2AQ9Y2K7 1162 aa17.68■□□□□ 0.42
SYVN1-215ENST00000533685 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
SYVN1-215ENST00000533685 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
SYVN1-215ENST00000533685 DIP2AQ14689 1571 aa17.66■□□□□ 0.42
SYVN1-215ENST00000533685 NBPF8Q3BBV2 869 aa17.65■□□□□ 0.42
SYVN1-215ENST00000533685 TRPM1Q7Z4N2 1603 aa17.64■□□□□ 0.41
SYVN1-215ENST00000533685 POLR1AO95602 1720 aaPredicted RBP17.63■□□□□ 0.41
SYVN1-215ENST00000533685 NRXN3Q9Y4C0 1643 aa17.62■□□□□ 0.41
SYVN1-215ENST00000533685 PIK3R4Q99570 1358 aa17.62■□□□□ 0.41
SYVN1-215ENST00000533685 ADAMTS13Q76LX8 1427 aa17.62■□□□□ 0.41
SYVN1-215ENST00000533685 ALKQ9UM73 1620 aa17.61■□□□□ 0.41
SYVN1-215ENST00000533685 TBX22Q9Y458 520 aa17.61■□□□□ 0.41
SYVN1-215ENST00000533685 ROCK2O75116 1388 aaKnown RBP17.61■□□□□ 0.41
SYVN1-215ENST00000533685 NPHP4O75161 1426 aaPredicted RBP17.61■□□□□ 0.41
SYVN1-215ENST00000533685 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
SYVN1-215ENST00000533685 NUTM2DQ5VT03 806 aaPredicted RBP17.59■□□□□ 0.41
SYVN1-215ENST00000533685 SETD1AO15047 1707 aaKnown RBP17.58■□□□□ 0.41
SYVN1-215ENST00000533685 CFAP70Q5T0N1 1121 aa17.58■□□□□ 0.4
SYVN1-215ENST00000533685 IQGAP1P46940 1657 aa17.58■□□□□ 0.4
SYVN1-215ENST00000533685 HSPA2P54652 639 aa17.56■□□□□ 0.4
SYVN1-215ENST00000533685 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
SYVN1-215ENST00000533685 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
SYVN1-215ENST00000533685 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
SYVN1-215ENST00000533685 TECPR2O15040 1411 aa17.55■□□□□ 0.4
SYVN1-215ENST00000533685 NBPF1Q3BBV0 1214 aa17.54■□□□□ 0.4
SYVN1-215ENST00000533685 CARD11Q9BXL7 1154 aa17.54■□□□□ 0.4
SYVN1-215ENST00000533685 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
SYVN1-215ENST00000533685 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
SYVN1-215ENST00000533685 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
SYVN1-215ENST00000533685 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
SYVN1-215ENST00000533685 METP08581 1390 aa17.53■□□□□ 0.4
SYVN1-215ENST00000533685 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
SYVN1-215ENST00000533685 BCANQ96GW7 911 aa17.52■□□□□ 0.4
SYVN1-215ENST00000533685 YTHDC2Q9H6S0 1430 aaKnown RBP17.52■□□□□ 0.4
SYVN1-215ENST00000533685 DLC1Q96QB1 1528 aa17.52■□□□□ 0.39
SYVN1-215ENST00000533685 SIRT1Q96EB6 747 aa17.51■□□□□ 0.39
SYVN1-215ENST00000533685 SLC26A8Q96RN1 970 aa17.5■□□□□ 0.39
SYVN1-215ENST00000533685 USP47Q96K76 1375 aa17.5■□□□□ 0.39
SYVN1-215ENST00000533685 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
SYVN1-215ENST00000533685 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.39
SYVN1-215ENST00000533685 KNDC1Q76NI1 1749 aa17.49■□□□□ 0.39
SYVN1-215ENST00000533685 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
SYVN1-215ENST00000533685 SLC24A1O60721 1099 aa17.48■□□□□ 0.39
SYVN1-215ENST00000533685 NWD1Q149M9 1564 aa17.48■□□□□ 0.39
SYVN1-215ENST00000533685 CPS1P31327 1500 aa17.47■□□□□ 0.39
SYVN1-215ENST00000533685 TMEM132EQ6IEE7 984 aa17.47■□□□□ 0.39
SYVN1-215ENST00000533685 SBNO2Q9Y2G9 1366 aa17.47■□□□□ 0.39
SYVN1-215ENST00000533685 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
SYVN1-215ENST00000533685 PTPRUQ92729 1446 aa17.46■□□□□ 0.39
SYVN1-215ENST00000533685 NKTRP30414 1462 aaKnown RBP17.45■□□□□ 0.38
SYVN1-215ENST00000533685 KCNA6P17658 529 aa17.45■□□□□ 0.38
SYVN1-215ENST00000533685 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
SYVN1-215ENST00000533685 ARHGEF28Q8N1W1 1705 aaKnown RBP17.42■□□□□ 0.38
SYVN1-215ENST00000533685 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
SYVN1-215ENST00000533685 TRAK1Q9UPV9 953 aa17.41■□□□□ 0.38
SYVN1-215ENST00000533685 CENPJQ9HC77 1338 aaPredicted RBP17.41■□□□□ 0.38
SYVN1-215ENST00000533685 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
SYVN1-215ENST00000533685 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
SYVN1-215ENST00000533685 ST20-MTHFSA0A0A6YYL1 179 aa17.39■□□□□ 0.37
SYVN1-215ENST00000533685 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
SYVN1-215ENST00000533685 TESK2Q96S53 571 aa17.38■□□□□ 0.37
SYVN1-215ENST00000533685 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
SYVN1-215ENST00000533685 STK26Q9P289 416 aa17.38■□□□□ 0.37
SYVN1-215ENST00000533685 PRAM1Q96QH2 718 aa17.37■□□□□ 0.37
SYVN1-215ENST00000533685 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
SYVN1-215ENST00000533685 POGKQ9P215 609 aa17.35■□□□□ 0.37
SYVN1-215ENST00000533685 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
SYVN1-215ENST00000533685 QRICH2Q9H0J4 1663 aa17.33■□□□□ 0.37
SYVN1-215ENST00000533685 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
SYVN1-215ENST00000533685 TMF1P82094 1093 aa17.32■□□□□ 0.36
SYVN1-215ENST00000533685 PLEKHH1Q9ULM0 1364 aa17.31■□□□□ 0.36
SYVN1-215ENST00000533685 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
SYVN1-215ENST00000533685 DCCP43146 1447 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms