RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 STAG3Q9UJ98 1225 aa19.45■□□□□ 0.7
TRAPPC4-214ENST00000533632 SCAF11Q99590 1463 aaKnown RBP19.45■□□□□ 0.7
TRAPPC4-214ENST00000533632 IQGAP1P46940 1657 aa19.43■□□□□ 0.7
TRAPPC4-214ENST00000533632 ANKLE2Q86XL3 938 aa19.43■□□□□ 0.7
TRAPPC4-214ENST00000533632 CHGAP10645 457 aaKnown RBP19.42■□□□□ 0.7
TRAPPC4-214ENST00000533632 RIMS2Q9UQ26 1411 aa19.42■□□□□ 0.7
TRAPPC4-214ENST00000533632 NEXMIFQ5QGS0 1516 aa19.42■□□□□ 0.7
TRAPPC4-214ENST00000533632 IFT172Q9UG01 1749 aa19.42■□□□□ 0.7
TRAPPC4-214ENST00000533632 NPHP4O75161 1426 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC4-214ENST00000533632 RGL3Q3MIN7 710 aa19.4■□□□□ 0.7
TRAPPC4-214ENST00000533632 TXNDC2Q86VQ3 553 aa19.4■□□□□ 0.7
TRAPPC4-214ENST00000533632 PPLO60437 1756 aa19.4■□□□□ 0.7
TRAPPC4-214ENST00000533632 TONSLQ96HA7 1378 aa19.39■□□□□ 0.69
TRAPPC4-214ENST00000533632 L3MBTL2Q969R5 705 aa19.39■□□□□ 0.69
TRAPPC4-214ENST00000533632 DMRT2Q9Y5R5 561 aa19.37■□□□□ 0.69
TRAPPC4-214ENST00000533632 NRXN3Q9Y4C0 1643 aa19.35■□□□□ 0.69
TRAPPC4-214ENST00000533632 NUTM2DQ5VT03 806 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC4-214ENST00000533632 EID1Q9Y6B2 187 aa19.35■□□□□ 0.69
TRAPPC4-214ENST00000533632 PLEKHG1Q9ULL1 1385 aa19.34■□□□□ 0.69
TRAPPC4-214ENST00000533632 ZNF326Q5BKZ1 582 aaKnown RBP19.33■□□□□ 0.68
TRAPPC4-214ENST00000533632 STRCP1A6NGW2 1772 aa19.32■□□□□ 0.68
TRAPPC4-214ENST00000533632 DCAF11Q8TEB1 546 aa19.32■□□□□ 0.68
TRAPPC4-214ENST00000533632 TIMELESSQ9UNS1 1208 aa19.32■□□□□ 0.68
TRAPPC4-214ENST00000533632 LTBP4Q8N2S1 1624 aa19.31■□□□□ 0.68
TRAPPC4-214ENST00000533632 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRAPPC4-214ENST00000533632 ADAMTS13Q76LX8 1427 aa19.31■□□□□ 0.68
TRAPPC4-214ENST00000533632 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
TRAPPC4-214ENST00000533632 MYOM2P54296 1465 aa19.3■□□□□ 0.68
TRAPPC4-214ENST00000533632 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
TRAPPC4-214ENST00000533632 RPGRIP1LQ68CZ1 1315 aa19.29■□□□□ 0.68
TRAPPC4-214ENST00000533632 SETD1AO15047 1707 aaKnown RBP19.29■□□□□ 0.68
TRAPPC4-214ENST00000533632 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC4-214ENST00000533632 HDGFP51858 240 aaKnown RBP19.28■□□□□ 0.68
TRAPPC4-214ENST00000533632 ZNF335Q9H4Z2 1342 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC4-214ENST00000533632 NRXN1Q9ULB1 1477 aa19.27■□□□□ 0.68
TRAPPC4-214ENST00000533632 PPP1R15AO75807 674 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC4-214ENST00000533632 ADGRF5Q8IZF2 1346 aa19.27■□□□□ 0.68
TRAPPC4-214ENST00000533632 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.67
TRAPPC4-214ENST00000533632 PRAG1Q86YV5 1406 aa19.26■□□□□ 0.67
TRAPPC4-214ENST00000533632 NBPF8Q3BBV2 869 aa19.26■□□□□ 0.67
TRAPPC4-214ENST00000533632 DIP2AQ14689 1571 aa19.25■□□□□ 0.67
TRAPPC4-214ENST00000533632 CHD2O14647 1828 aaKnown RBP19.25■□□□□ 0.67
TRAPPC4-214ENST00000533632 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
TRAPPC4-214ENST00000533632 NWD1Q149M9 1564 aa19.22■□□□□ 0.67
TRAPPC4-214ENST00000533632 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
TRAPPC4-214ENST00000533632 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
TRAPPC4-214ENST00000533632 TBX22Q9Y458 520 aa19.21■□□□□ 0.67
TRAPPC4-214ENST00000533632 ALKQ9UM73 1620 aa19.21■□□□□ 0.67
TRAPPC4-214ENST00000533632 XIRP1Q702N8 1843 aaKnown RBP19.19■□□□□ 0.66
TRAPPC4-214ENST00000533632 BCANQ96GW7 911 aa19.19■□□□□ 0.66
TRAPPC4-214ENST00000533632 STAC3Q96MF2 364 aa19.19■□□□□ 0.66
TRAPPC4-214ENST00000533632 PTPRUQ92729 1446 aa19.18■□□□□ 0.66
TRAPPC4-214ENST00000533632 KIAA1210Q9ULL0 1709 aa19.18■□□□□ 0.66
TRAPPC4-214ENST00000533632 METP08581 1390 aa19.18■□□□□ 0.66
TRAPPC4-214ENST00000533632 ASXL1Q8IXJ9 1541 aa19.18■□□□□ 0.66
TRAPPC4-214ENST00000533632 XRN1Q8IZH2 1706 aaKnown RBP19.17■□□□□ 0.66
TRAPPC4-214ENST00000533632 CPS1P31327 1500 aa19.17■□□□□ 0.66
TRAPPC4-214ENST00000533632 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
TRAPPC4-214ENST00000533632 LAMC1P11047 1609 aa19.15■□□□□ 0.66
TRAPPC4-214ENST00000533632 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
TRAPPC4-214ENST00000533632 LRRC7Q96NW7 1537 aa19.15■□□□□ 0.66
TRAPPC4-214ENST00000533632 KCNA6P17658 529 aa19.14■□□□□ 0.66
TRAPPC4-214ENST00000533632 CFAP70Q5T0N1 1121 aa19.14■□□□□ 0.66
TRAPPC4-214ENST00000533632 NBPF1Q3BBV0 1214 aa19.13■□□□□ 0.65
TRAPPC4-214ENST00000533632 ADGRB1O14514 1584 aa19.13■□□□□ 0.65
TRAPPC4-214ENST00000533632 NKTRP30414 1462 aaKnown RBP19.12■□□□□ 0.65
TRAPPC4-214ENST00000533632 CERKQ8TCT0 537 aa19.12■□□□□ 0.65
TRAPPC4-214ENST00000533632 C14orf93Q9H972 538 aaKnown RBP19.12■□□□□ 0.65
TRAPPC4-214ENST00000533632 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
TRAPPC4-214ENST00000533632 IQSEC2Q5JU85 1478 aa19.09■□□□□ 0.65
TRAPPC4-214ENST00000533632 ROCK2O75116 1388 aaKnown RBP19.08■□□□□ 0.65
TRAPPC4-214ENST00000533632 AMOTL2Q9Y2J4 779 aa19.08■□□□□ 0.64
TRAPPC4-214ENST00000533632 TMEM132EQ6IEE7 984 aa19.07■□□□□ 0.64
TRAPPC4-214ENST00000533632 KNDC1Q76NI1 1749 aa19.07■□□□□ 0.64
TRAPPC4-214ENST00000533632 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
TRAPPC4-214ENST00000533632 RBM33Q96EV2 1170 aaKnown RBP19.05■□□□□ 0.64
TRAPPC4-214ENST00000533632 TECPR2O15040 1411 aa19.03■□□□□ 0.64
TRAPPC4-214ENST00000533632 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
TRAPPC4-214ENST00000533632 YTHDC2Q9H6S0 1430 aaKnown RBP19.02■□□□□ 0.64
TRAPPC4-214ENST00000533632 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
TRAPPC4-214ENST00000533632 ROBO2Q9HCK4 1378 aa19.02■□□□□ 0.64
TRAPPC4-214ENST00000533632 PROSER2Q86WR7 435 aaPredicted RBP19.02■□□□□ 0.64
TRAPPC4-214ENST00000533632 CARD11Q9BXL7 1154 aa19.02■□□□□ 0.64
TRAPPC4-214ENST00000533632 ARHGEF28Q8N1W1 1705 aaKnown RBP19.01■□□□□ 0.63
TRAPPC4-214ENST00000533632 NALCNQ8IZF0 1738 aa19■□□□□ 0.63
TRAPPC4-214ENST00000533632 ABCC11Q96J66 1382 aa19■□□□□ 0.63
TRAPPC4-214ENST00000533632 USP47Q96K76 1375 aa18.98■□□□□ 0.63
TRAPPC4-214ENST00000533632 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC4-214ENST00000533632 NCOA3Q9Y6Q9 1424 aa18.98■□□□□ 0.63
TRAPPC4-214ENST00000533632 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC4-214ENST00000533632 STK26Q9P289 416 aa18.97■□□□□ 0.63
TRAPPC4-214ENST00000533632 DLC1Q96QB1 1528 aa18.97■□□□□ 0.63
TRAPPC4-214ENST00000533632 PLEKHH1Q9ULM0 1364 aa18.96■□□□□ 0.63
TRAPPC4-214ENST00000533632 TRAK1Q9UPV9 953 aa18.96■□□□□ 0.63
TRAPPC4-214ENST00000533632 HIRIP3Q9BW71 556 aaPredicted RBP18.93■□□□□ 0.62
TRAPPC4-214ENST00000533632 FAM135BQ49AJ0 1406 aa18.93■□□□□ 0.62
TRAPPC4-214ENST00000533632 ADGRL3Q9HAR2 1447 aa18.93■□□□□ 0.62
TRAPPC4-214ENST00000533632 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
TRAPPC4-214ENST00000533632 WAPLQ7Z5K2 1190 aa18.93■□□□□ 0.62
TRAPPC4-214ENST00000533632 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms