RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 ANKLE2Q86XL3 938 aa30.44■■■□□ 2.46
PTP4A2-215ENST00000533408 LMTK3Q96Q04 1460 aa30.43■■■□□ 2.46
PTP4A2-215ENST00000533408 PPP1R15AO75807 674 aaPredicted RBP30.4■■■□□ 2.46
PTP4A2-215ENST00000533408 SLIT1O75093 1534 aa30.39■■■□□ 2.46
PTP4A2-215ENST00000533408 TXNDC2Q86VQ3 553 aa30.39■■■□□ 2.46
PTP4A2-215ENST00000533408 RIMS2Q9UQ26 1411 aa30.39■■■□□ 2.45
PTP4A2-215ENST00000533408 ARHGAP23Q9P227 1491 aa30.38■■■□□ 2.45
PTP4A2-215ENST00000533408 DCAF11Q8TEB1 546 aa30.37■■■□□ 2.45
PTP4A2-215ENST00000533408 ZFYVE9O95405 1425 aa30.34■■■□□ 2.45
PTP4A2-215ENST00000533408 L3MBTL2Q969R5 705 aa30.34■■■□□ 2.45
PTP4A2-215ENST00000533408 HSPA2P54652 639 aa30.32■■■□□ 2.44
PTP4A2-215ENST00000533408 SCAF11Q99590 1463 aaKnown RBP30.31■■■□□ 2.44
PTP4A2-215ENST00000533408 DMRT2Q9Y5R5 561 aa30.3■■■□□ 2.44
PTP4A2-215ENST00000533408 KDM2AQ9Y2K7 1162 aa30.29■■■□□ 2.44
PTP4A2-215ENST00000533408 NEXMIFQ5QGS0 1516 aa30.28■■■□□ 2.44
PTP4A2-215ENST00000533408 BCANQ96GW7 911 aa30.28■■■□□ 2.44
PTP4A2-215ENST00000533408 MYO5BQ9ULV0 1848 aa30.27■■■□□ 2.44
PTP4A2-215ENST00000533408 LTKP29376 864 aa30.27■■■□□ 2.44
PTP4A2-215ENST00000533408 MYOM2P54296 1465 aa30.26■■■□□ 2.44
PTP4A2-215ENST00000533408 ZEB1P37275 1124 aaPredicted RBP30.25■■■□□ 2.43
PTP4A2-215ENST00000533408 PLEKHG1Q9ULL1 1385 aa30.25■■■□□ 2.43
PTP4A2-215ENST00000533408 NUTM2DQ5VT03 806 aaPredicted RBP30.23■■■□□ 2.43
PTP4A2-215ENST00000533408 NCKAP5LQ9HCH0 1330 aa30.22■■■□□ 2.43
PTP4A2-215ENST00000533408 PPLO60437 1756 aa30.21■■■□□ 2.43
PTP4A2-215ENST00000533408 MED14O60244 1454 aa30.21■■■□□ 2.43
PTP4A2-215ENST00000533408 ADGRF5Q8IZF2 1346 aa30.2■■■□□ 2.42
PTP4A2-215ENST00000533408 NPHP4O75161 1426 aaPredicted RBP30.19■■■□□ 2.42
PTP4A2-215ENST00000533408 IFT172Q9UG01 1749 aa30.17■■■□□ 2.42
PTP4A2-215ENST00000533408 NRXN1Q9ULB1 1477 aa30.15■■■□□ 2.42
PTP4A2-215ENST00000533408 TBX22Q9Y458 520 aa30.15■■■□□ 2.42
PTP4A2-215ENST00000533408 POLR1AO95602 1720 aaPredicted RBP30.14■■■□□ 2.42
PTP4A2-215ENST00000533408 PIK3C2GO75747 1445 aa30.13■■■□□ 2.41
PTP4A2-215ENST00000533408 C14orf93Q9H972 538 aaKnown RBP30.13■■■□□ 2.41
PTP4A2-215ENST00000533408 PRAG1Q86YV5 1406 aa30.11■■■□□ 2.41
PTP4A2-215ENST00000533408 SETBP1Q9Y6X0 1596 aa30.11■■■□□ 2.41
PTP4A2-215ENST00000533408 DIP2AQ14689 1571 aa30.07■■■□□ 2.4
PTP4A2-215ENST00000533408 SLC26A8Q96RN1 970 aa30.07■■■□□ 2.4
PTP4A2-215ENST00000533408 IQGAP1P46940 1657 aa30.06■■■□□ 2.4
PTP4A2-215ENST00000533408 PIK3R4Q99570 1358 aa30.05■■■□□ 2.4
PTP4A2-215ENST00000533408 LAMC1P11047 1609 aa30.04■■■□□ 2.4
PTP4A2-215ENST00000533408 CFAP70Q5T0N1 1121 aa30.04■■■□□ 2.4
PTP4A2-215ENST00000533408 STRCQ7RTU9 1775 aa30.04■■■□□ 2.4
PTP4A2-215ENST00000533408 ADAMTS13Q76LX8 1427 aa30.03■■■□□ 2.4
PTP4A2-215ENST00000533408 ALKQ9UM73 1620 aa30.01■■■□□ 2.39
PTP4A2-215ENST00000533408 SENP3Q9H4L4 574 aaPredicted RBP30.01■■■□□ 2.39
PTP4A2-215ENST00000533408 NBPF8Q3BBV2 869 aa30■■■□□ 2.39
PTP4A2-215ENST00000533408 KIAA1210Q9ULL0 1709 aa29.98■■■□□ 2.39
PTP4A2-215ENST00000533408 ROCK2O75116 1388 aaKnown RBP29.97■■■□□ 2.39
PTP4A2-215ENST00000533408 NRXN3Q9Y4C0 1643 aa29.95■■■□□ 2.38
PTP4A2-215ENST00000533408 KCNA6P17658 529 aa29.94■■■□□ 2.38
PTP4A2-215ENST00000533408 RALGAPBQ86X10 1494 aa29.93■■■□□ 2.38
PTP4A2-215ENST00000533408 METP08581 1390 aa29.92■■■□□ 2.38
PTP4A2-215ENST00000533408 TMEM132EQ6IEE7 984 aa29.91■■■□□ 2.38
PTP4A2-215ENST00000533408 CARD11Q9BXL7 1154 aa29.91■■■□□ 2.38
PTP4A2-215ENST00000533408 NBPF1Q3BBV0 1214 aa29.9■■■□□ 2.38
PTP4A2-215ENST00000533408 AMOTL2Q9Y2J4 779 aa29.9■■■□□ 2.38
PTP4A2-215ENST00000533408 LRPPRCP42704 1394 aaKnown RBP29.9■■■□□ 2.38
PTP4A2-215ENST00000533408 GPRASP1Q5JY77 1395 aa29.89■■■□□ 2.37
PTP4A2-215ENST00000533408 TRPM1Q7Z4N2 1603 aa29.89■■■□□ 2.37
PTP4A2-215ENST00000533408 ABCC11Q96J66 1382 aa29.89■■■□□ 2.37
PTP4A2-215ENST00000533408 SIRT1Q96EB6 747 aa29.88■■■□□ 2.37
PTP4A2-215ENST00000533408 YTHDC2Q9H6S0 1430 aaKnown RBP29.87■■■□□ 2.37
PTP4A2-215ENST00000533408 STK26Q9P289 416 aa29.85■■■□□ 2.37
PTP4A2-215ENST00000533408 EIF3AQ14152 1382 aaKnown RBP29.84■■■□□ 2.37
PTP4A2-215ENST00000533408 ADGRB1O14514 1584 aa29.84■■■□□ 2.37
PTP4A2-215ENST00000533408 SETD1AO15047 1707 aaKnown RBP29.82■■■□□ 2.36
PTP4A2-215ENST00000533408 SLC24A1O60721 1099 aa29.8■■■□□ 2.36
PTP4A2-215ENST00000533408 TRAK1Q9UPV9 953 aa29.8■■■□□ 2.36
PTP4A2-215ENST00000533408 TECPR2O15040 1411 aa29.79■■■□□ 2.36
PTP4A2-215ENST00000533408 NKTRP30414 1462 aaKnown RBP29.79■■■□□ 2.36
PTP4A2-215ENST00000533408 POGKQ9P215 609 aa29.78■■■□□ 2.36
PTP4A2-215ENST00000533408 PTPRUQ92729 1446 aa29.78■■■□□ 2.36
PTP4A2-215ENST00000533408 PROSER2Q86WR7 435 aaPredicted RBP29.77■■■□□ 2.36
PTP4A2-215ENST00000533408 CHD2O14647 1828 aaKnown RBP29.77■■■□□ 2.36
PTP4A2-215ENST00000533408 PTCH1Q13635 1447 aa29.77■■■□□ 2.36
PTP4A2-215ENST00000533408 FAM135BQ49AJ0 1406 aa29.77■■■□□ 2.36
PTP4A2-215ENST00000533408 ASXL1Q8IXJ9 1541 aa29.76■■■□□ 2.36
PTP4A2-215ENST00000533408 DLC1Q96QB1 1528 aa29.76■■■□□ 2.36
PTP4A2-215ENST00000533408 ZNF335Q9H4Z2 1342 aaPredicted RBP29.76■■■□□ 2.36
PTP4A2-215ENST00000533408 NWD1Q149M9 1564 aa29.76■■■□□ 2.35
PTP4A2-215ENST00000533408 CPS1P31327 1500 aa29.75■■■□□ 2.35
PTP4A2-215ENST00000533408 EIF4G2P78344 907 aaKnown RBP eCLIP29.74■■■□□ 2.357e-15■■■■■ 46
PTP4A2-215ENST00000533408 NCOA3Q9Y6Q9 1424 aa29.73■■■□□ 2.35
PTP4A2-215ENST00000533408 XRN1Q8IZH2 1706 aaKnown RBP29.71■■■□□ 2.35
PTP4A2-215ENST00000533408 PRAM1Q96QH2 718 aa29.71■■■□□ 2.35
PTP4A2-215ENST00000533408 KNDC1Q76NI1 1749 aa29.7■■■□□ 2.34
PTP4A2-215ENST00000533408 CENPJQ9HC77 1338 aaPredicted RBP29.7■■■□□ 2.34
PTP4A2-215ENST00000533408 USP47Q96K76 1375 aa29.69■■■□□ 2.34
PTP4A2-215ENST00000533408 ROBO2Q9HCK4 1378 aa29.69■■■□□ 2.34
PTP4A2-215ENST00000533408 C14orf37Q86TY3 774 aa29.67■■■□□ 2.34
PTP4A2-215ENST00000533408 WAPLQ7Z5K2 1190 aa29.65■■■□□ 2.34
PTP4A2-215ENST00000533408 TMEM94Q12767 1356 aa29.62■■■□□ 2.33
PTP4A2-215ENST00000533408 ST20-MTHFSA0A0A6YYL1 179 aa29.61■■■□□ 2.33
PTP4A2-215ENST00000533408 C19orf44Q9H6X5 657 aa29.61■■■□□ 2.33
PTP4A2-215ENST00000533408 LRRC7Q96NW7 1537 aa29.6■■■□□ 2.33
PTP4A2-215ENST00000533408 SBNO2Q9Y2G9 1366 aa29.59■■■□□ 2.33
PTP4A2-215ENST00000533408 SAFB2Q14151 953 aaKnown RBP eCLIP29.58■■■□□ 2.339e-10■□□□□ 9.7
PTP4A2-215ENST00000533408 ARHGEF28Q8N1W1 1705 aaKnown RBP29.58■■■□□ 2.33
PTP4A2-215ENST00000533408 LTBP4Q8N2S1 1624 aa29.58■■■□□ 2.33
PTP4A2-215ENST00000533408 MSH6P52701 1360 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms