RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 NRXN3Q9Y4C0 1643 aa11.56□□□□□ -0.56
COMMD9-207ENST00000533308 SENP3Q9H4L4 574 aaPredicted RBP11.55□□□□□ -0.56
COMMD9-207ENST00000533308 SCAF11Q99590 1463 aaKnown RBP11.55□□□□□ -0.56
COMMD9-207ENST00000533308 LTKP29376 864 aa11.54□□□□□ -0.56
COMMD9-207ENST00000533308 RGL3Q3MIN7 710 aa11.54□□□□□ -0.56
COMMD9-207ENST00000533308 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
COMMD9-207ENST00000533308 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
COMMD9-207ENST00000533308 ZNF326Q5BKZ1 582 aaKnown RBP11.53□□□□□ -0.56
COMMD9-207ENST00000533308 CCER1Q8TC90 406 aaPredicted RBP11.53□□□□□ -0.56
COMMD9-207ENST00000533308 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.56
COMMD9-207ENST00000533308 THEMISQ8N1K5 641 aaPredicted RBP11.52□□□□□ -0.57
COMMD9-207ENST00000533308 NPHP4O75161 1426 aaPredicted RBP11.5□□□□□ -0.57
COMMD9-207ENST00000533308 MED14O60244 1454 aa11.5□□□□□ -0.57
COMMD9-207ENST00000533308 MYOM2P54296 1465 aa11.5□□□□□ -0.57
COMMD9-207ENST00000533308 SETBP1Q9Y6X0 1596 aa11.5□□□□□ -0.57
COMMD9-207ENST00000533308 TXNDC2Q86VQ3 553 aa11.49□□□□□ -0.57
COMMD9-207ENST00000533308 ASXL1Q8IXJ9 1541 aa11.49□□□□□ -0.57
COMMD9-207ENST00000533308 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
COMMD9-207ENST00000533308 PLEKHG1Q9ULL1 1385 aa11.48□□□□□ -0.57
COMMD9-207ENST00000533308 ADAMTS13Q76LX8 1427 aa11.48□□□□□ -0.57
COMMD9-207ENST00000533308 NRXN1Q9ULB1 1477 aa11.48□□□□□ -0.57
COMMD9-207ENST00000533308 STRCP1A6NGW2 1772 aa11.48□□□□□ -0.57
COMMD9-207ENST00000533308 PIK3C2GO75747 1445 aa11.47□□□□□ -0.57
COMMD9-207ENST00000533308 ANKLE2Q86XL3 938 aa11.47□□□□□ -0.57
COMMD9-207ENST00000533308 ALKQ9UM73 1620 aa11.46□□□□□ -0.57
COMMD9-207ENST00000533308 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.57
COMMD9-207ENST00000533308 L3MBTL2Q969R5 705 aa11.46□□□□□ -0.57
COMMD9-207ENST00000533308 CLSPNQ9HAW4 1339 aa11.45□□□□□ -0.58
COMMD9-207ENST00000533308 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
COMMD9-207ENST00000533308 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
COMMD9-207ENST00000533308 EID1Q9Y6B2 187 aa11.45□□□□□ -0.58
COMMD9-207ENST00000533308 LAMC1P11047 1609 aa11.45□□□□□ -0.58
COMMD9-207ENST00000533308 TRPM1Q7Z4N2 1603 aa11.45□□□□□ -0.58
COMMD9-207ENST00000533308 DIP2AQ14689 1571 aa11.45□□□□□ -0.58
COMMD9-207ENST00000533308 TONSLQ96HA7 1378 aa11.44□□□□□ -0.58
COMMD9-207ENST00000533308 RPGRIP1LQ68CZ1 1315 aa11.44□□□□□ -0.58
COMMD9-207ENST00000533308 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
COMMD9-207ENST00000533308 PRAG1Q86YV5 1406 aa11.43□□□□□ -0.58
COMMD9-207ENST00000533308 NWD1Q149M9 1564 aa11.43□□□□□ -0.58
COMMD9-207ENST00000533308 SLC26A8Q96RN1 970 aa11.43□□□□□ -0.58
COMMD9-207ENST00000533308 CHD2O14647 1828 aaKnown RBP11.43□□□□□ -0.58
COMMD9-207ENST00000533308 XRN1Q8IZH2 1706 aaKnown RBP11.43□□□□□ -0.58
COMMD9-207ENST00000533308 KIAA1210Q9ULL0 1709 aa11.42□□□□□ -0.58
COMMD9-207ENST00000533308 PTPRUQ92729 1446 aa11.42□□□□□ -0.58
COMMD9-207ENST00000533308 METP08581 1390 aa11.41□□□□□ -0.58
COMMD9-207ENST00000533308 ADGRB1O14514 1584 aa11.41□□□□□ -0.58
COMMD9-207ENST00000533308 BCANQ96GW7 911 aa11.41□□□□□ -0.58
COMMD9-207ENST00000533308 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
COMMD9-207ENST00000533308 VGFO15240 615 aaPredicted RBP11.4□□□□□ -0.58
COMMD9-207ENST00000533308 NBPF8Q3BBV2 869 aa11.4□□□□□ -0.58
COMMD9-207ENST00000533308 KNDC1Q76NI1 1749 aa11.4□□□□□ -0.58
COMMD9-207ENST00000533308 XIRP1Q702N8 1843 aaKnown RBP11.39□□□□□ -0.59
COMMD9-207ENST00000533308 LTBP4Q8N2S1 1624 aa11.39□□□□□ -0.59
COMMD9-207ENST00000533308 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
COMMD9-207ENST00000533308 CFAP70Q5T0N1 1121 aa11.39□□□□□ -0.59
COMMD9-207ENST00000533308 ARHGEF28Q8N1W1 1705 aaKnown RBP11.38□□□□□ -0.59
COMMD9-207ENST00000533308 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
COMMD9-207ENST00000533308 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
COMMD9-207ENST00000533308 CPS1P31327 1500 aa11.36□□□□□ -0.59
COMMD9-207ENST00000533308 C14orf93Q9H972 538 aaKnown RBP11.36□□□□□ -0.59
COMMD9-207ENST00000533308 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
COMMD9-207ENST00000533308 TBX22Q9Y458 520 aa11.35□□□□□ -0.59
COMMD9-207ENST00000533308 NALCNQ8IZF0 1738 aa11.35□□□□□ -0.59
COMMD9-207ENST00000533308 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
COMMD9-207ENST00000533308 NKTRP30414 1462 aaKnown RBP11.34□□□□□ -0.59
COMMD9-207ENST00000533308 DMRT2Q9Y5R5 561 aa11.34□□□□□ -0.59
COMMD9-207ENST00000533308 ROBO2Q9HCK4 1378 aa11.33□□□□□ -0.6
COMMD9-207ENST00000533308 KCNA6P17658 529 aa11.33□□□□□ -0.6
COMMD9-207ENST00000533308 RBM33Q96EV2 1170 aaKnown RBP11.33□□□□□ -0.6
COMMD9-207ENST00000533308 LRRC7Q96NW7 1537 aa11.33□□□□□ -0.6
COMMD9-207ENST00000533308 LRPPRCP42704 1394 aaKnown RBP11.32□□□□□ -0.6
COMMD9-207ENST00000533308 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
COMMD9-207ENST00000533308 PLEKHH1Q9ULM0 1364 aa11.32□□□□□ -0.6
COMMD9-207ENST00000533308 STK26Q9P289 416 aa11.32□□□□□ -0.6
COMMD9-207ENST00000533308 TECPR2O15040 1411 aa11.32□□□□□ -0.6
COMMD9-207ENST00000533308 PTCH1Q13635 1447 aa11.32□□□□□ -0.6
COMMD9-207ENST00000533308 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.32□□□□□ -0.6
COMMD9-207ENST00000533308 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
COMMD9-207ENST00000533308 QRICH2Q9H0J4 1663 aa11.31□□□□□ -0.6
COMMD9-207ENST00000533308 STAC3Q96MF2 364 aa11.31□□□□□ -0.6
COMMD9-207ENST00000533308 AMOTL2Q9Y2J4 779 aa11.31□□□□□ -0.6
COMMD9-207ENST00000533308 DLC1Q96QB1 1528 aa11.3□□□□□ -0.6
COMMD9-207ENST00000533308 GPRASP1Q5JY77 1395 aa11.3□□□□□ -0.6
COMMD9-207ENST00000533308 TIMELESSQ9UNS1 1208 aa11.3□□□□□ -0.6
COMMD9-207ENST00000533308 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
COMMD9-207ENST00000533308 TRAK1Q9UPV9 953 aa11.28□□□□□ -0.6
COMMD9-207ENST00000533308 ABCC11Q96J66 1382 aa11.28□□□□□ -0.6
COMMD9-207ENST00000533308 WAPLQ7Z5K2 1190 aa11.27□□□□□ -0.61
COMMD9-207ENST00000533308 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
COMMD9-207ENST00000533308 ADGRB2O60241 1585 aa11.25□□□□□ -0.61
COMMD9-207ENST00000533308 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
COMMD9-207ENST00000533308 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
COMMD9-207ENST00000533308 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
COMMD9-207ENST00000533308 FAM135BQ49AJ0 1406 aa11.25□□□□□ -0.61
COMMD9-207ENST00000533308 ADGRL3Q9HAR2 1447 aa11.25□□□□□ -0.61
COMMD9-207ENST00000533308 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
COMMD9-207ENST00000533308 FMN2Q9NZ56 1722 aa11.24□□□□□ -0.61
COMMD9-207ENST00000533308 USP47Q96K76 1375 aa11.24□□□□□ -0.61
COMMD9-207ENST00000533308 TULP4Q9NRJ4 1543 aa11.24□□□□□ -0.61
COMMD9-207ENST00000533308 USP32Q8NFA0 1604 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms