RNA–Protein interactions for RNA: ENST00000533279.1

GMDS-210, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-210ENST00000533279 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
GMDS-210ENST00000533279 UBR1Q8IWV7 1749 aa16.28■□□□□ 0.2
GMDS-210ENST00000533279 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
GMDS-210ENST00000533279 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
GMDS-210ENST00000533279 RIMS2Q9UQ26 1411 aa16.26■□□□□ 0.19
GMDS-210ENST00000533279 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
GMDS-210ENST00000533279 BCANQ96GW7 911 aa16.25■□□□□ 0.19
GMDS-210ENST00000533279 KDM2AQ9Y2K7 1162 aa16.25■□□□□ 0.19
GMDS-210ENST00000533279 ANKLE2Q86XL3 938 aa16.24■□□□□ 0.19
GMDS-210ENST00000533279 L3MBTL2Q969R5 705 aa16.24■□□□□ 0.19
GMDS-210ENST00000533279 MYO5BQ9ULV0 1848 aa16.23■□□□□ 0.19
GMDS-210ENST00000533279 SLIT1O75093 1534 aa16.23■□□□□ 0.19
GMDS-210ENST00000533279 MYOM2P54296 1465 aa16.22■□□□□ 0.19
GMDS-210ENST00000533279 TXNDC2Q86VQ3 553 aa16.22■□□□□ 0.19
GMDS-210ENST00000533279 NEXMIFQ5QGS0 1516 aa16.21■□□□□ 0.19
GMDS-210ENST00000533279 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
GMDS-210ENST00000533279 PPLO60437 1756 aa16.21■□□□□ 0.18
GMDS-210ENST00000533279 ZFYVE9O95405 1425 aa16.19■□□□□ 0.18
GMDS-210ENST00000533279 ARHGAP23Q9P227 1491 aa16.19■□□□□ 0.18
GMDS-210ENST00000533279 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
GMDS-210ENST00000533279 LMTK3Q96Q04 1460 aa16.18■□□□□ 0.18
GMDS-210ENST00000533279 NUTM2DQ5VT03 806 aaPredicted RBP16.18■□□□□ 0.18
GMDS-210ENST00000533279 PLEKHG1Q9ULL1 1385 aa16.16■□□□□ 0.18
GMDS-210ENST00000533279 LAMC1P11047 1609 aa16.16■□□□□ 0.18
GMDS-210ENST00000533279 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
GMDS-210ENST00000533279 ADRA2BP18089 450 aa16.15■□□□□ 0.18
GMDS-210ENST00000533279 PRAG1Q86YV5 1406 aa16.15■□□□□ 0.18
GMDS-210ENST00000533279 HSPA2P54652 639 aa16.14■□□□□ 0.17
GMDS-210ENST00000533279 ADGRF5Q8IZF2 1346 aa16.14■□□□□ 0.17
GMDS-210ENST00000533279 NPHP4O75161 1426 aaPredicted RBP16.13■□□□□ 0.17
GMDS-210ENST00000533279 PIK3C2GO75747 1445 aa16.13■□□□□ 0.17
GMDS-210ENST00000533279 ROCK2O75116 1388 aaKnown RBP16.13■□□□□ 0.17
GMDS-210ENST00000533279 NRXN1Q9ULB1 1477 aa16.12■□□□□ 0.17
GMDS-210ENST00000533279 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
GMDS-210ENST00000533279 DIP2AQ14689 1571 aa16.12■□□□□ 0.17
GMDS-210ENST00000533279 LTKP29376 864 aa16.11■□□□□ 0.17
GMDS-210ENST00000533279 SETBP1Q9Y6X0 1596 aa16.1■□□□□ 0.17
GMDS-210ENST00000533279 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
GMDS-210ENST00000533279 KIAA1210Q9ULL0 1709 aa16.09■□□□□ 0.17
GMDS-210ENST00000533279 MED14O60244 1454 aa16.09■□□□□ 0.17
GMDS-210ENST00000533279 RALGAPBQ86X10 1494 aa16.09■□□□□ 0.17
GMDS-210ENST00000533279 IQGAP1P46940 1657 aa16.08■□□□□ 0.17
GMDS-210ENST00000533279 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
GMDS-210ENST00000533279 CARD11Q9BXL7 1154 aa16.07■□□□□ 0.16
GMDS-210ENST00000533279 EIF3AQ14152 1382 aaKnown RBP16.07■□□□□ 0.16
GMDS-210ENST00000533279 ALKQ9UM73 1620 aa16.06■□□□□ 0.16
GMDS-210ENST00000533279 CFAP70Q5T0N1 1121 aa16.06■□□□□ 0.16
GMDS-210ENST00000533279 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
GMDS-210ENST00000533279 TRPM1Q7Z4N2 1603 aa16.05■□□□□ 0.16
GMDS-210ENST00000533279 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
GMDS-210ENST00000533279 PIK3R4Q99570 1358 aa16.04■□□□□ 0.16
GMDS-210ENST00000533279 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
GMDS-210ENST00000533279 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.15
GMDS-210ENST00000533279 GPRASP1Q5JY77 1395 aa16.01■□□□□ 0.15
GMDS-210ENST00000533279 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
GMDS-210ENST00000533279 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
GMDS-210ENST00000533279 STK26Q9P289 416 aa15.99■□□□□ 0.15
GMDS-210ENST00000533279 YTHDC2Q9H6S0 1430 aaKnown RBP15.99■□□□□ 0.15
GMDS-210ENST00000533279 LRPPRCP42704 1394 aaKnown RBP15.99■□□□□ 0.15
GMDS-210ENST00000533279 STRCQ7RTU9 1775 aa15.98■□□□□ 0.15
GMDS-210ENST00000533279 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
GMDS-210ENST00000533279 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
GMDS-210ENST00000533279 TMEM132EQ6IEE7 984 aa15.98■□□□□ 0.15
GMDS-210ENST00000533279 METP08581 1390 aa15.98■□□□□ 0.15
GMDS-210ENST00000533279 POGKQ9P215 609 aa15.97■□□□□ 0.15
GMDS-210ENST00000533279 USP47Q96K76 1375 aa15.97■□□□□ 0.15
GMDS-210ENST00000533279 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
GMDS-210ENST00000533279 TRAK1Q9UPV9 953 aa15.96■□□□□ 0.15
GMDS-210ENST00000533279 SETD1AO15047 1707 aaKnown RBP15.96■□□□□ 0.15
GMDS-210ENST00000533279 KCNA6P17658 529 aa15.95■□□□□ 0.14
GMDS-210ENST00000533279 AMOTL2Q9Y2J4 779 aa15.95■□□□□ 0.14
GMDS-210ENST00000533279 ABCC11Q96J66 1382 aa15.95■□□□□ 0.14
GMDS-210ENST00000533279 KNDC1Q76NI1 1749 aa15.94■□□□□ 0.14
GMDS-210ENST00000533279 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
GMDS-210ENST00000533279 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
GMDS-210ENST00000533279 PTCH1Q13635 1447 aa15.94■□□□□ 0.14
GMDS-210ENST00000533279 NKTRP30414 1462 aaKnown RBP15.93■□□□□ 0.14
GMDS-210ENST00000533279 CPS1P31327 1500 aa15.93■□□□□ 0.14
GMDS-210ENST00000533279 CENPJQ9HC77 1338 aaPredicted RBP15.93■□□□□ 0.14
GMDS-210ENST00000533279 C14orf37Q86TY3 774 aa15.92■□□□□ 0.14
GMDS-210ENST00000533279 TECPR2O15040 1411 aa15.92■□□□□ 0.14
GMDS-210ENST00000533279 FAM135BQ49AJ0 1406 aa15.92■□□□□ 0.14
GMDS-210ENST00000533279 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
GMDS-210ENST00000533279 NWD1Q149M9 1564 aa15.91■□□□□ 0.14
GMDS-210ENST00000533279 CHD2O14647 1828 aaKnown RBP15.9■□□□□ 0.14
GMDS-210ENST00000533279 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
GMDS-210ENST00000533279 PRAM1Q96QH2 718 aa15.9■□□□□ 0.14
GMDS-210ENST00000533279 XRN1Q8IZH2 1706 aaKnown RBP15.9■□□□□ 0.14
GMDS-210ENST00000533279 HSPA5P11021 654 aaKnown RBP15.89■□□□□ 0.13
GMDS-210ENST00000533279 PROSER2Q86WR7 435 aaPredicted RBP15.89■□□□□ 0.13
GMDS-210ENST00000533279 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
GMDS-210ENST00000533279 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
GMDS-210ENST00000533279 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
GMDS-210ENST00000533279 ST20-MTHFSA0A0A6YYL1 179 aa15.87■□□□□ 0.13
GMDS-210ENST00000533279 SAFB2Q14151 953 aaKnown RBP eCLIP15.87■□□□□ 0.13
GMDS-210ENST00000533279 TMF1P82094 1093 aa15.86■□□□□ 0.13
GMDS-210ENST00000533279 ZNF335Q9H4Z2 1342 aaPredicted RBP15.86■□□□□ 0.13
GMDS-210ENST00000533279 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
GMDS-210ENST00000533279 EVC2Q86UK5 1308 aa15.85■□□□□ 0.13
GMDS-210ENST00000533279 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms