RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 ANO8Q9HCE9 1232 aaPredicted RBP13.28□□□□□ -0.28
COLCA1-203ENST00000532918 NESP48681 1621 aa13.28□□□□□ -0.28
COLCA1-203ENST00000532918 VPS53Q5VIR6 699 aa13.28□□□□□ -0.28
COLCA1-203ENST00000532918 E9PSI1 815 aa13.28□□□□□ -0.28
COLCA1-203ENST00000532918 CSPP1Q1MSJ5 1256 aa13.27□□□□□ -0.28
COLCA1-203ENST00000532918 WWC1Q8IX03 1113 aa13.27□□□□□ -0.28
COLCA1-203ENST00000532918 TPM4P67936 248 aa13.27□□□□□ -0.29
COLCA1-203ENST00000532918 SMG6Q86US8 1419 aaKnown RBP13.27□□□□□ -0.29
COLCA1-203ENST00000532918 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
COLCA1-203ENST00000532918 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
COLCA1-203ENST00000532918 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
COLCA1-203ENST00000532918 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
COLCA1-203ENST00000532918 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
COLCA1-203ENST00000532918 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
COLCA1-203ENST00000532918 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
COLCA1-203ENST00000532918 CALRP27797 417 aaKnown RBP13.25□□□□□ -0.29
COLCA1-203ENST00000532918 CLUAP1Q96AJ1 413 aa13.25□□□□□ -0.29
COLCA1-203ENST00000532918 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
COLCA1-203ENST00000532918 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
COLCA1-203ENST00000532918 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
COLCA1-203ENST00000532918 ZKSCAN2Q63HK3 967 aa13.25□□□□□ -0.29
COLCA1-203ENST00000532918 ZNF644Q9H582 1327 aaPredicted RBP13.25□□□□□ -0.29
COLCA1-203ENST00000532918 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
COLCA1-203ENST00000532918 DRC7Q8IY82 874 aa13.24□□□□□ -0.29
COLCA1-203ENST00000532918 TCEAL9Q9UHQ7 104 aa13.24□□□□□ -0.29
COLCA1-203ENST00000532918 EFCAB5A4FU69 1503 aa13.24□□□□□ -0.29
COLCA1-203ENST00000532918 SYAP1Q96A49 352 aaPredicted RBP13.24□□□□□ -0.29
COLCA1-203ENST00000532918 KIF21BO75037 1637 aa13.24□□□□□ -0.29
COLCA1-203ENST00000532918 PLEKHO1Q53GL0 409 aaPredicted RBP13.24□□□□□ -0.29
COLCA1-203ENST00000532918 TCERG1O14776 1098 aaKnown RBP13.23□□□□□ -0.29
COLCA1-203ENST00000532918 NCOA2Q15596 1464 aa13.23□□□□□ -0.29
COLCA1-203ENST00000532918 GNAI1P63096 354 aa13.23□□□□□ -0.29
COLCA1-203ENST00000532918 ELL2O00472 640 aaPredicted RBP13.23□□□□□ -0.29
COLCA1-203ENST00000532918 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
COLCA1-203ENST00000532918 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
COLCA1-203ENST00000532918 SCAPERQ9BY12 1400 aa13.22□□□□□ -0.29
COLCA1-203ENST00000532918 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
COLCA1-203ENST00000532918 RIPK4P57078 832 aa13.22□□□□□ -0.29
COLCA1-203ENST00000532918 CPLX2Q6PUV4 134 aaKnown RBP13.22□□□□□ -0.29
COLCA1-203ENST00000532918 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
COLCA1-203ENST00000532918 HSP90AB4PQ58FF6 505 aa13.22□□□□□ -0.29
COLCA1-203ENST00000532918 TATP17735 454 aaPredicted RBP13.21□□□□□ -0.29
COLCA1-203ENST00000532918 G3BP1Q13283 466 aaKnown RBP eCLIP13.21□□□□□ -0.29
COLCA1-203ENST00000532918 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
COLCA1-203ENST00000532918 HFM1A2PYH4 1435 aa13.21□□□□□ -0.29
COLCA1-203ENST00000532918 GAS2L2Q8NHY3 880 aa13.21□□□□□ -0.29
COLCA1-203ENST00000532918 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
COLCA1-203ENST00000532918 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.3
COLCA1-203ENST00000532918 RPGRIP1LQ68CZ1 1315 aa13.21□□□□□ -0.3
COLCA1-203ENST00000532918 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.3
COLCA1-203ENST00000532918 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
COLCA1-203ENST00000532918 IFIT2P09913 472 aaKnown RBP13.2□□□□□ -0.3
COLCA1-203ENST00000532918 NUTM2BA6NNL0 878 aaPredicted RBP13.2□□□□□ -0.3
COLCA1-203ENST00000532918 NUTM2EB1AL46 878 aaPredicted RBP13.2□□□□□ -0.3
COLCA1-203ENST00000532918 ST18O60284 1047 aa13.2□□□□□ -0.3
COLCA1-203ENST00000532918 NUTM2AQ8IVF1 878 aaPredicted RBP13.2□□□□□ -0.3
COLCA1-203ENST00000532918 RIC3Q7Z5B4 369 aa13.2□□□□□ -0.3
COLCA1-203ENST00000532918 RUNDC1Q96C34 613 aa13.2□□□□□ -0.3
COLCA1-203ENST00000532918 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
COLCA1-203ENST00000532918 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
COLCA1-203ENST00000532918 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
COLCA1-203ENST00000532918 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
COLCA1-203ENST00000532918 TROQ12816 1431 aaPredicted RBP13.19□□□□□ -0.3
COLCA1-203ENST00000532918 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
COLCA1-203ENST00000532918 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
COLCA1-203ENST00000532918 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
COLCA1-203ENST00000532918 KIF6Q6ZMV9 814 aa13.18□□□□□ -0.3
COLCA1-203ENST00000532918 MFAP1P55081 439 aaKnown RBP13.18□□□□□ -0.3
COLCA1-203ENST00000532918 TMEM132EQ6IEE7 984 aa13.18□□□□□ -0.3
COLCA1-203ENST00000532918 RAD21O60216 631 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 USP35Q9P2H5 1018 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 RILPL2Q969X0 211 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 HECW1Q76N89 1606 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 C9orf84Q5VXU9 1444 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 RAPGEF3O95398 923 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
COLCA1-203ENST00000532918 SF3A1Q15459 793 aaKnown RBP13.16□□□□□ -0.3
COLCA1-203ENST00000532918 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
COLCA1-203ENST00000532918 TRDNQ13061 729 aa13.16□□□□□ -0.3
COLCA1-203ENST00000532918 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
COLCA1-203ENST00000532918 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
COLCA1-203ENST00000532918 APPP05067 770 aa13.15□□□□□ -0.3
COLCA1-203ENST00000532918 GGNBP2Q9H3C7 697 aa13.15□□□□□ -0.3
COLCA1-203ENST00000532918 PRAM1Q96QH2 718 aa13.15□□□□□ -0.3
COLCA1-203ENST00000532918 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
COLCA1-203ENST00000532918 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
COLCA1-203ENST00000532918 CEP89Q96ST8 783 aa13.15□□□□□ -0.3
COLCA1-203ENST00000532918 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
COLCA1-203ENST00000532918 ERICH2A1L162 156 aa13.14□□□□□ -0.31
COLCA1-203ENST00000532918 H3BQV1 296 aa13.14□□□□□ -0.31
COLCA1-203ENST00000532918 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
COLCA1-203ENST00000532918 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
COLCA1-203ENST00000532918 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
COLCA1-203ENST00000532918 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
COLCA1-203ENST00000532918 APAF1O14727 1248 aa13.14□□□□□ -0.31
COLCA1-203ENST00000532918 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
COLCA1-203ENST00000532918 PRDM11Q9NQV5 511 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms