RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 TMEM131LA2VDJ0 1609 aa34.95■■■■□ 3.19
LTBP3-220ENST00000532661 BCANQ96GW7 911 aa34.95■■■■□ 3.19
LTBP3-220ENST00000532661 RIMS2Q9UQ26 1411 aa34.94■■■■□ 3.18
LTBP3-220ENST00000532661 MYO5BQ9ULV0 1848 aa34.92■■■■□ 3.18
LTBP3-220ENST00000532661 KCNA6P17658 529 aa34.91■■■■□ 3.18
LTBP3-220ENST00000532661 NAIPQ13075 1403 aa34.9■■■■□ 3.18
LTBP3-220ENST00000532661 PPP1R15AO75807 674 aaPredicted RBP34.89■■■■□ 3.18
LTBP3-220ENST00000532661 NUTM2DQ5VT03 806 aaPredicted RBP34.88■■■■□ 3.17
LTBP3-220ENST00000532661 HDGFP51858 240 aaKnown RBP34.87■■■■□ 3.17
LTBP3-220ENST00000532661 PLEKHG1Q9ULL1 1385 aa34.87■■■■□ 3.17
LTBP3-220ENST00000532661 RBM33Q96EV2 1170 aaKnown RBP34.85■■■■□ 3.17
LTBP3-220ENST00000532661 TMEM94Q12767 1356 aa34.83■■■■□ 3.17
LTBP3-220ENST00000532661 ILDR2Q71H61 639 aa34.82■■■■□ 3.16
LTBP3-220ENST00000532661 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.82■■■■□ 3.16
LTBP3-220ENST00000532661 XIRP1Q702N8 1843 aaKnown RBP34.82■■■■□ 3.16
LTBP3-220ENST00000532661 PROSER2Q86WR7 435 aaPredicted RBP34.81■■■■□ 3.16
LTBP3-220ENST00000532661 HFM1A2PYH4 1435 aa34.75■■■■□ 3.15
LTBP3-220ENST00000532661 TBX22Q9Y458 520 aa34.75■■■■□ 3.15
LTBP3-220ENST00000532661 NWD1Q149M9 1564 aa34.74■■■■□ 3.15
LTBP3-220ENST00000532661 TRIM52Q96A61 297 aa34.74■■■■□ 3.15
LTBP3-220ENST00000532661 SPHKAPQ2M3C7 1700 aa34.72■■■■□ 3.15
LTBP3-220ENST00000532661 ADAMTS13Q76LX8 1427 aa34.72■■■■□ 3.15
LTBP3-220ENST00000532661 NKTRP30414 1462 aaKnown RBP34.71■■■■□ 3.15
LTBP3-220ENST00000532661 ZNF326Q5BKZ1 582 aaKnown RBP34.67■■■■□ 3.14
LTBP3-220ENST00000532661 CHD2O14647 1828 aaKnown RBP34.65■■■■□ 3.14
LTBP3-220ENST00000532661 CLTCL1P53675 1640 aa34.63■■■■□ 3.13
LTBP3-220ENST00000532661 TRPM2O94759 1503 aa34.61■■■■□ 3.13
LTBP3-220ENST00000532661 SLC4A1APQ9BWU0 796 aaKnown RBP34.61■■■■□ 3.13
LTBP3-220ENST00000532661 FAM135BQ49AJ0 1406 aa34.6■■■■□ 3.13
LTBP3-220ENST00000532661 MSH6P52701 1360 aa34.59■■■■□ 3.13
LTBP3-220ENST00000532661 DIP2AQ14689 1571 aa34.58■■■■□ 3.13
LTBP3-220ENST00000532661 MED1Q15648 1581 aaPredicted RBP34.58■■■■□ 3.13
LTBP3-220ENST00000532661 PIK3R4Q99570 1358 aa34.57■■■■□ 3.12
LTBP3-220ENST00000532661 PTPRUQ92729 1446 aa34.55■■■■□ 3.12
LTBP3-220ENST00000532661 AMOTL2Q9Y2J4 779 aa34.54■■■■□ 3.12
LTBP3-220ENST00000532661 NRXN3Q9Y4C0 1643 aa34.52■■■■□ 3.12
LTBP3-220ENST00000532661 FOXD1Q16676 465 aa34.51■■■■□ 3.12
LTBP3-220ENST00000532661 C14orf37Q86TY3 774 aa34.5■■■■□ 3.11
LTBP3-220ENST00000532661 SLAIN2Q9P270 581 aa34.5■■■■□ 3.11
LTBP3-220ENST00000532661 NEXMIFQ5QGS0 1516 aa34.5■■■■□ 3.11
LTBP3-220ENST00000532661 SETBP1Q9Y6X0 1596 aa34.49■■■■□ 3.11
LTBP3-220ENST00000532661 ROBO1Q9Y6N7 1651 aa34.47■■■■□ 3.11
LTBP3-220ENST00000532661 NCOA3Q9Y6Q9 1424 aa34.47■■■■□ 3.11
LTBP3-220ENST00000532661 METP08581 1390 aa34.47■■■■□ 3.11
LTBP3-220ENST00000532661 SOCS7O14512 581 aa34.45■■■■□ 3.11
LTBP3-220ENST00000532661 KIF1BO60333 1816 aa34.44■■■■□ 3.1
LTBP3-220ENST00000532661 C19orf44Q9H6X5 657 aa34.41■■■■□ 3.1
LTBP3-220ENST00000532661 MPHOSPH9Q99550 1183 aa34.4■■■■□ 3.1
LTBP3-220ENST00000532661 PHF23Q9BUL5 403 aaPredicted RBP34.39■■■■□ 3.1
LTBP3-220ENST00000532661 XRN1Q8IZH2 1706 aaKnown RBP34.36■■■■□ 3.09
LTBP3-220ENST00000532661 VGFO15240 615 aaPredicted RBP34.36■■■■□ 3.09
LTBP3-220ENST00000532661 ATF3P18847 181 aa34.36■■■■□ 3.09
LTBP3-220ENST00000532661 CADPS2Q86UW7 1296 aa34.36■■■■□ 3.09
LTBP3-220ENST00000532661 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.35■■■■□ 3.09
LTBP3-220ENST00000532661 RPGRIP1LQ68CZ1 1315 aa34.34■■■■□ 3.09
LTBP3-220ENST00000532661 SETD5Q9C0A6 1442 aa34.3■■■■□ 3.08
LTBP3-220ENST00000532661 CCDC144AA2RUR9 1427 aa34.28■■■■□ 3.08
LTBP3-220ENST00000532661 RGL3Q3MIN7 710 aa34.26■■■■□ 3.08
LTBP3-220ENST00000532661 PHLPP1O60346 1717 aa34.25■■■■□ 3.07
LTBP3-220ENST00000532661 RGS17Q9UGC6 210 aaPredicted RBP34.23■■■■□ 3.07
LTBP3-220ENST00000532661 DCCP43146 1447 aa34.21■■■■□ 3.07
LTBP3-220ENST00000532661 SPATA31E1Q6ZUB1 1445 aa34.21■■■■□ 3.07
LTBP3-220ENST00000532661 PPLO60437 1756 aa34.21■■■■□ 3.07
LTBP3-220ENST00000532661 BRINP3Q76B58 766 aa34.21■■■■□ 3.07
LTBP3-220ENST00000532661 ADGRF5Q8IZF2 1346 aa34.21■■■■□ 3.07
LTBP3-220ENST00000532661 SETD1AO15047 1707 aaKnown RBP34.2■■■■□ 3.07
LTBP3-220ENST00000532661 RAB3GAP2Q9H2M9 1393 aa34.2■■■■□ 3.07
LTBP3-220ENST00000532661 JCADQ9P266 1359 aa34.18■■■■□ 3.06
LTBP3-220ENST00000532661 ADGRL3Q9HAR2 1447 aa34.18■■■■□ 3.06
LTBP3-220ENST00000532661 COL16A1Q07092 1604 aaPredicted RBP34.18■■■■□ 3.06
LTBP3-220ENST00000532661 MST1RQ04912 1400 aa34.17■■■■□ 3.06
LTBP3-220ENST00000532661 ROBO2Q9HCK4 1378 aa34.17■■■■□ 3.06
LTBP3-220ENST00000532661 ACIN1Q9UKV3 1341 aaKnown RBP34.16■■■■□ 3.06
LTBP3-220ENST00000532661 PTCH1Q13635 1447 aa34.13■■■■□ 3.05
LTBP3-220ENST00000532661 AHDC1Q5TGY3 1603 aaPredicted RBP34.13■■■■□ 3.05
LTBP3-220ENST00000532661 NALCNQ8IZF0 1738 aa34.1■■■■□ 3.05
LTBP3-220ENST00000532661 ANKRD30BQ9BXX2 1392 aa34.09■■■■□ 3.05
LTBP3-220ENST00000532661 ASXL1Q8IXJ9 1541 aa34.09■■■■□ 3.05
LTBP3-220ENST00000532661 PRAG1Q86YV5 1406 aa34.07■■■■□ 3.04
LTBP3-220ENST00000532661 POTEAQ6S8J7 498 aa34.04■■■■□ 3.04
LTBP3-220ENST00000532661 DDX17Q92841 729 aaKnown RBP34.04■■■■□ 3.04
LTBP3-220ENST00000532661 IFT172Q9UG01 1749 aa34.04■■■■□ 3.04
LTBP3-220ENST00000532661 STK26Q9P289 416 aa34.03■■■■□ 3.04
LTBP3-220ENST00000532661 TMEM132EQ6IEE7 984 aa34.02■■■■□ 3.04
LTBP3-220ENST00000532661 C1orf167Q5SNV9 1468 aa34.01■■■■□ 3.04
LTBP3-220ENST00000532661 SPATA31A6Q5VVP1 1343 aa34.01■■■■□ 3.03
LTBP3-220ENST00000532661 LRP6O75581 1613 aa34■■■■□ 3.03
LTBP3-220ENST00000532661 PIK3C2GO75747 1445 aa33.99■■■■□ 3.03
LTBP3-220ENST00000532661 WAPLQ7Z5K2 1190 aa33.96■■■■□ 3.03
LTBP3-220ENST00000532661 ORAI2Q96SN7 254 aa33.96■■■■□ 3.03
LTBP3-220ENST00000532661 LRPPRCP42704 1394 aaKnown RBP33.96■■■■□ 3.03
LTBP3-220ENST00000532661 NHSL1Q5SYE7 1610 aa33.95■■■■□ 3.03
LTBP3-220ENST00000532661 SHPRHQ149N8 1683 aa33.94■■■■□ 3.02
LTBP3-220ENST00000532661 NUTM2BA6NNL0 878 aaPredicted RBP33.92■■■■□ 3.02
LTBP3-220ENST00000532661 NUTM2EB1AL46 878 aaPredicted RBP33.92■■■■□ 3.02
LTBP3-220ENST00000532661 MEX3CQ5U5Q3 659 aaKnown RBP33.92■■■■□ 3.02
LTBP3-220ENST00000532661 NUTM2AQ8IVF1 878 aaPredicted RBP33.92■■■■□ 3.02
LTBP3-220ENST00000532661 TECPR2O15040 1411 aa33.91■■■■□ 3.02
LTBP3-220ENST00000532661 ABCC11Q96J66 1382 aa33.91■■■■□ 3.02
LTBP3-220ENST00000532661 LRRC59Q96AG4 307 aaKnown RBP33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms