RNA–Protein interactions for RNA: ENST00000532249.1

SOX9-AS1-209, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-209ENST00000532249 TNRQ92752 1358 aa8.22□□□□□ -1.09
SOX9-AS1-209ENST00000532249 KIF1BO60333 1816 aa8.22□□□□□ -1.09
SOX9-AS1-209ENST00000532249 PIK3C2BO00750 1634 aa8.22□□□□□ -1.09
SOX9-AS1-209ENST00000532249 PLA2R1Q13018 1463 aa8.22□□□□□ -1.09
SOX9-AS1-209ENST00000532249 LMTK3Q96Q04 1460 aa8.22□□□□□ -1.09
SOX9-AS1-209ENST00000532249 TRIM26Q12899 539 aaPredicted RBP8.22□□□□□ -1.09
SOX9-AS1-209ENST00000532249 ATF5Q9Y2D1 282 aaPredicted RBP8.22□□□□□ -1.09
SOX9-AS1-209ENST00000532249 UBR1Q8IWV7 1749 aa8.21□□□□□ -1.09
SOX9-AS1-209ENST00000532249 TRPM2O94759 1503 aa8.21□□□□□ -1.1
SOX9-AS1-209ENST00000532249 UGGT1Q9NYU2 1555 aa8.21□□□□□ -1.1
SOX9-AS1-209ENST00000532249 NOS1P29475 1434 aa8.2□□□□□ -1.1
SOX9-AS1-209ENST00000532249 ADGRB3O60242 1522 aa8.2□□□□□ -1.1
SOX9-AS1-209ENST00000532249 PITPNM1O00562 1244 aa8.2□□□□□ -1.1
SOX9-AS1-209ENST00000532249 SLC52A1Q9NWF4 448 aa8.2□□□□□ -1.1
SOX9-AS1-209ENST00000532249 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
SOX9-AS1-209ENST00000532249 SYNMO15061 1565 aa8.19□□□□□ -1.1
SOX9-AS1-209ENST00000532249 NEURL4Q96JN8 1562 aa8.19□□□□□ -1.1
SOX9-AS1-209ENST00000532249 HSPA2P54652 639 aa8.18□□□□□ -1.1
SOX9-AS1-209ENST00000532249 TRIM52Q96A61 297 aa8.18□□□□□ -1.1
SOX9-AS1-209ENST00000532249 PTPRTO14522 1441 aa8.18□□□□□ -1.1
SOX9-AS1-209ENST00000532249 SLIT1O75093 1534 aa8.17□□□□□ -1.1
SOX9-AS1-209ENST00000532249 TMEM131LA2VDJ0 1609 aa8.16□□□□□ -1.1
SOX9-AS1-209ENST00000532249 THEMISQ8N1K5 641 aaPredicted RBP8.16□□□□□ -1.1
SOX9-AS1-209ENST00000532249 MYO5BQ9ULV0 1848 aa8.15□□□□□ -1.1
SOX9-AS1-209ENST00000532249 IQGAP1P46940 1657 aa8.15□□□□□ -1.1
SOX9-AS1-209ENST00000532249 CLTCL1P53675 1640 aa8.15□□□□□ -1.1
SOX9-AS1-209ENST00000532249 HDGFP51858 240 aaKnown RBP8.15□□□□□ -1.1
SOX9-AS1-209ENST00000532249 PKD2Q13563 968 aa8.15□□□□□ -1.1
SOX9-AS1-209ENST00000532249 STRCQ7RTU9 1775 aa8.15□□□□□ -1.11
SOX9-AS1-209ENST00000532249 CCDC144AA2RUR9 1427 aa8.14□□□□□ -1.11
SOX9-AS1-209ENST00000532249 FBXO31Q5XUX0 539 aaPredicted RBP8.14□□□□□ -1.11
SOX9-AS1-209ENST00000532249 MPHOSPH9Q99550 1183 aa8.14□□□□□ -1.11
SOX9-AS1-209ENST00000532249 STAG3Q9UJ98 1225 aa8.14□□□□□ -1.11
SOX9-AS1-209ENST00000532249 ZBTB12Q9Y330 459 aaPredicted RBP8.14□□□□□ -1.11
SOX9-AS1-209ENST00000532249 DIP2AQ14689 1571 aa8.14□□□□□ -1.11
SOX9-AS1-209ENST00000532249 GABBR2O75899 941 aa8.13□□□□□ -1.11
SOX9-AS1-209ENST00000532249 MED14O60244 1454 aa8.13□□□□□ -1.11
SOX9-AS1-209ENST00000532249 SCAF11Q99590 1463 aaKnown RBP8.13□□□□□ -1.11
SOX9-AS1-209ENST00000532249 ARHGAP23Q9P227 1491 aa8.13□□□□□ -1.11
SOX9-AS1-209ENST00000532249 ATXN8OSP0DMR3 200 aa8.12□□□□□ -1.11
SOX9-AS1-209ENST00000532249 EID1Q9Y6B2 187 aa8.12□□□□□ -1.11
SOX9-AS1-209ENST00000532249 PPLO60437 1756 aa8.12□□□□□ -1.11
SOX9-AS1-209ENST00000532249 IFT172Q9UG01 1749 aa8.12□□□□□ -1.11
SOX9-AS1-209ENST00000532249 ANKLE2Q86XL3 938 aa8.11□□□□□ -1.11
SOX9-AS1-209ENST00000532249 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.11□□□□□ -1.11
SOX9-AS1-209ENST00000532249 LAMC1P11047 1609 aa8.11□□□□□ -1.11
SOX9-AS1-209ENST00000532249 TMEM2Q9UHN6 1383 aa8.1□□□□□ -1.11
SOX9-AS1-209ENST00000532249 RPGRIP1LQ68CZ1 1315 aa8.09□□□□□ -1.11
SOX9-AS1-209ENST00000532249 IDI1Q13907 227 aa8.09□□□□□ -1.11
SOX9-AS1-209ENST00000532249 STAC3Q96MF2 364 aa8.09□□□□□ -1.11
SOX9-AS1-209ENST00000532249 ZFYVE9O95405 1425 aa8.09□□□□□ -1.11
SOX9-AS1-209ENST00000532249 NEXMIFQ5QGS0 1516 aa8.08□□□□□ -1.12
SOX9-AS1-209ENST00000532249 NPHP4O75161 1426 aaPredicted RBP8.08□□□□□ -1.12
SOX9-AS1-209ENST00000532249 SETBP1Q9Y6X0 1596 aa8.08□□□□□ -1.12
SOX9-AS1-209ENST00000532249 ANKRD30BQ9BXX2 1392 aa8.08□□□□□ -1.12
SOX9-AS1-209ENST00000532249 RIMS2Q9UQ26 1411 aa8.07□□□□□ -1.12
SOX9-AS1-209ENST00000532249 CPS1P31327 1500 aa8.07□□□□□ -1.12
SOX9-AS1-209ENST00000532249 PLEKHG1Q9ULL1 1385 aa8.07□□□□□ -1.12
SOX9-AS1-209ENST00000532249 MYOM2P54296 1465 aa8.06□□□□□ -1.12
SOX9-AS1-209ENST00000532249 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
SOX9-AS1-209ENST00000532249 CLSPNQ9HAW4 1339 aa8.06□□□□□ -1.12
SOX9-AS1-209ENST00000532249 PPP1R15AO75807 674 aaPredicted RBP8.06□□□□□ -1.12
SOX9-AS1-209ENST00000532249 PIK3R4Q99570 1358 aa8.06□□□□□ -1.12
SOX9-AS1-209ENST00000532249 SPATA31E1Q6ZUB1 1445 aa8.05□□□□□ -1.12
SOX9-AS1-209ENST00000532249 VGFO15240 615 aaPredicted RBP8.05□□□□□ -1.12
SOX9-AS1-209ENST00000532249 CHGAP10645 457 aaKnown RBP8.05□□□□□ -1.12
SOX9-AS1-209ENST00000532249 ZNF326Q5BKZ1 582 aaKnown RBP8.05□□□□□ -1.12
SOX9-AS1-209ENST00000532249 TXNDC2Q86VQ3 553 aa8.05□□□□□ -1.12
SOX9-AS1-209ENST00000532249 KIAA1210Q9ULL0 1709 aa8.05□□□□□ -1.12
SOX9-AS1-209ENST00000532249 NWD1Q149M9 1564 aa8.05□□□□□ -1.12
SOX9-AS1-209ENST00000532249 NCKAP5LQ9HCH0 1330 aa8.04□□□□□ -1.12
SOX9-AS1-209ENST00000532249 CHD2O14647 1828 aaKnown RBP8.04□□□□□ -1.12
SOX9-AS1-209ENST00000532249 C19orf67A6NJJ6 358 aa8.04□□□□□ -1.12
SOX9-AS1-209ENST00000532249 PRKAR2AP13861 404 aaKnown RBP8.04□□□□□ -1.12
SOX9-AS1-209ENST00000532249 NKTRP30414 1462 aaKnown RBP8.04□□□□□ -1.12
SOX9-AS1-209ENST00000532249 DHX57Q6P158 1386 aaKnown RBP8.03□□□□□ -1.12
SOX9-AS1-209ENST00000532249 SETD1AO15047 1707 aaKnown RBP8.03□□□□□ -1.12
SOX9-AS1-209ENST00000532249 NRXN3Q9Y4C0 1643 aa8.03□□□□□ -1.12
SOX9-AS1-209ENST00000532249 PCGF6Q9BYE7 350 aa8.02□□□□□ -1.13
SOX9-AS1-209ENST00000532249 KNDC1Q76NI1 1749 aa8.02□□□□□ -1.13
SOX9-AS1-209ENST00000532249 STRCP1A6NGW2 1772 aa8.02□□□□□ -1.13
SOX9-AS1-209ENST00000532249 NRXN1Q9ULB1 1477 aa8.01□□□□□ -1.13
SOX9-AS1-209ENST00000532249 PIK3C2GO75747 1445 aa8.01□□□□□ -1.13
SOX9-AS1-209ENST00000532249 PRAG1Q86YV5 1406 aa8.01□□□□□ -1.13
SOX9-AS1-209ENST00000532249 NUTM2DQ5VT03 806 aaPredicted RBP8□□□□□ -1.13
SOX9-AS1-209ENST00000532249 BCANQ96GW7 911 aa8□□□□□ -1.13
SOX9-AS1-209ENST00000532249 NCOA3Q9Y6Q9 1424 aa8□□□□□ -1.13
SOX9-AS1-209ENST00000532249 XRN1Q8IZH2 1706 aaKnown RBP8□□□□□ -1.13
SOX9-AS1-209ENST00000532249 ALKQ9UM73 1620 aa8□□□□□ -1.13
SOX9-AS1-209ENST00000532249 LTKP29376 864 aa7.99□□□□□ -1.13
SOX9-AS1-209ENST00000532249 TBX22Q9Y458 520 aa7.99□□□□□ -1.13
SOX9-AS1-209ENST00000532249 LTBP4Q8N2S1 1624 aa7.99□□□□□ -1.13
SOX9-AS1-209ENST00000532249 PTCH1Q13635 1447 aa7.98□□□□□ -1.13
SOX9-AS1-209ENST00000532249 ADAMTS13Q76LX8 1427 aa7.98□□□□□ -1.13
SOX9-AS1-209ENST00000532249 TIMELESSQ9UNS1 1208 aa7.98□□□□□ -1.13
SOX9-AS1-209ENST00000532249 TONSLQ96HA7 1378 aa7.97□□□□□ -1.13
SOX9-AS1-209ENST00000532249 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
SOX9-AS1-209ENST00000532249 KCNA6P17658 529 aa7.96□□□□□ -1.14
SOX9-AS1-209ENST00000532249 RGL3Q3MIN7 710 aa7.96□□□□□ -1.14
SOX9-AS1-209ENST00000532249 TECPR2O15040 1411 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms