RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 TMEM131LA2VDJ0 1609 aa28.17■■■□□ 2.1
PUF60-218ENST00000531995 IQGAP3Q86VI3 1631 aa28.17■■■□□ 2.1
PUF60-218ENST00000531995 SLC26A8Q96RN1 970 aa28.15■■■□□ 2.1
PUF60-218ENST00000531995 TMEM94Q12767 1356 aa28.14■■■□□ 2.1
PUF60-218ENST00000531995 ZFYVE9O95405 1425 aa28.13■■■□□ 2.09
PUF60-218ENST00000531995 NKTRP30414 1462 aaKnown RBP28.12■■■□□ 2.09
PUF60-218ENST00000531995 SLC52A1Q9NWF4 448 aa28.11■■■□□ 2.09
PUF60-218ENST00000531995 ROBO1Q9Y6N7 1651 aa28.1■■■□□ 2.09
PUF60-218ENST00000531995 RBM33Q96EV2 1170 aaKnown RBP28.09■■■□□ 2.09
PUF60-218ENST00000531995 RIMS2Q9UQ26 1411 aa28.09■■■□□ 2.09
PUF60-218ENST00000531995 BCANQ96GW7 911 aa28.08■■■□□ 2.09
PUF60-218ENST00000531995 PHF23Q9BUL5 403 aaPredicted RBP28.08■■■□□ 2.09
PUF60-218ENST00000531995 CHD2O14647 1828 aaKnown RBP28.07■■■□□ 2.08
PUF60-218ENST00000531995 KCNA6P17658 529 aa28.06■■■□□ 2.08
PUF60-218ENST00000531995 NAIPQ13075 1403 aa28.04■■■□□ 2.08
PUF60-218ENST00000531995 PLEKHG1Q9ULL1 1385 aa28.04■■■□□ 2.08
PUF60-218ENST00000531995 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
PUF60-218ENST00000531995 PROSER2Q86WR7 435 aaPredicted RBP28.02■■■□□ 2.08
PUF60-218ENST00000531995 CHGAP10645 457 aaKnown RBP28.01■■■□□ 2.07
PUF60-218ENST00000531995 SPHKAPQ2M3C7 1700 aa28.01■■■□□ 2.07
PUF60-218ENST00000531995 HFM1A2PYH4 1435 aa27.99■■■□□ 2.07
PUF60-218ENST00000531995 FAM135BQ49AJ0 1406 aa27.99■■■□□ 2.07
PUF60-218ENST00000531995 NUP155O75694 1391 aa27.98■■■□□ 2.07
PUF60-218ENST00000531995 NUTM2DQ5VT03 806 aaPredicted RBP27.97■■■□□ 2.07
PUF60-218ENST00000531995 DIP2AQ14689 1571 aa27.97■■■□□ 2.07
PUF60-218ENST00000531995 MSH6P52701 1360 aa27.95■■■□□ 2.06
PUF60-218ENST00000531995 PHLPP1O60346 1717 aa27.95■■■□□ 2.06
PUF60-218ENST00000531995 ADAMTS13Q76LX8 1427 aa27.92■■■□□ 2.06
PUF60-218ENST00000531995 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.05
PUF60-218ENST00000531995 TRPM2O94759 1503 aa27.88■■■□□ 2.05
PUF60-218ENST00000531995 HDGFP51858 240 aaKnown RBP27.87■■■□□ 2.05
PUF60-218ENST00000531995 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.87■■■□□ 2.05
PUF60-218ENST00000531995 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.87■■■□□ 2.05
PUF60-218ENST00000531995 CLTCL1P53675 1640 aa27.85■■■□□ 2.05
PUF60-218ENST00000531995 COL16A1Q07092 1604 aaPredicted RBP27.84■■■□□ 2.05
PUF60-218ENST00000531995 TBX22Q9Y458 520 aa27.83■■■□□ 2.05
PUF60-218ENST00000531995 SETD5Q9C0A6 1442 aa27.83■■■□□ 2.05
PUF60-218ENST00000531995 XRN1Q8IZH2 1706 aaKnown RBP27.82■■■□□ 2.04
PUF60-218ENST00000531995 C14orf37Q86TY3 774 aa27.81■■■□□ 2.04
PUF60-218ENST00000531995 RGS17Q9UGC6 210 aaPredicted RBP27.81■■■□□ 2.04
PUF60-218ENST00000531995 SETBP1Q9Y6X0 1596 aa27.81■■■□□ 2.04
PUF60-218ENST00000531995 PTPRUQ92729 1446 aa27.79■■■□□ 2.04
PUF60-218ENST00000531995 TRIM26Q12899 539 aaPredicted RBP27.79■■■□□ 2.04
PUF60-218ENST00000531995 SLAIN2Q9P270 581 aa27.79■■■□□ 2.04
PUF60-218ENST00000531995 PIK3R4Q99570 1358 aa27.77■■■□□ 2.04
PUF60-218ENST00000531995 KIF1BO60333 1816 aa27.76■■■□□ 2.04
PUF60-218ENST00000531995 NCOA3Q9Y6Q9 1424 aa27.75■■■□□ 2.03
PUF60-218ENST00000531995 NEXMIFQ5QGS0 1516 aa27.75■■■□□ 2.03
PUF60-218ENST00000531995 RAB3GAP2Q9H2M9 1393 aa27.74■■■□□ 2.03
PUF60-218ENST00000531995 AHDC1Q5TGY3 1603 aaPredicted RBP27.73■■■□□ 2.03
PUF60-218ENST00000531995 ZNF326Q5BKZ1 582 aaKnown RBP27.72■■■□□ 2.03
PUF60-218ENST00000531995 SETD1AO15047 1707 aaKnown RBP27.72■■■□□ 2.03
PUF60-218ENST00000531995 JCADQ9P266 1359 aa27.71■■■□□ 2.03
PUF60-218ENST00000531995 TRIM52Q96A61 297 aa27.7■■■□□ 2.02
PUF60-218ENST00000531995 AMOTL2Q9Y2J4 779 aa27.7■■■□□ 2.02
PUF60-218ENST00000531995 NALCNQ8IZF0 1738 aa27.69■■■□□ 2.02
PUF60-218ENST00000531995 SHPRHQ149N8 1683 aa27.68■■■□□ 2.02
PUF60-218ENST00000531995 LRP6O75581 1613 aa27.67■■■□□ 2.02
PUF60-218ENST00000531995 ATF3P18847 181 aa27.67■■■□□ 2.02
PUF60-218ENST00000531995 HRCP23327 699 aa27.67■■■□□ 2.02
PUF60-218ENST00000531995 METP08581 1390 aa27.66■■■□□ 2.02
PUF60-218ENST00000531995 POTEAQ6S8J7 498 aa27.66■■■□□ 2.02
PUF60-218ENST00000531995 CADPS2Q86UW7 1296 aa27.65■■■□□ 2.02
PUF60-218ENST00000531995 C19orf44Q9H6X5 657 aa27.65■■■□□ 2.02
PUF60-218ENST00000531995 ASXL1Q8IXJ9 1541 aa27.63■■■□□ 2.01
PUF60-218ENST00000531995 DCCP43146 1447 aa27.63■■■□□ 2.01
PUF60-218ENST00000531995 NHSL1Q5SYE7 1610 aa27.62■■■□□ 2.01
PUF60-218ENST00000531995 MST1RQ04912 1400 aa27.59■■■□□ 2.01
PUF60-218ENST00000531995 MPHOSPH9Q99550 1183 aa27.59■■■□□ 2.01
PUF60-218ENST00000531995 SLC4A1APQ9BWU0 796 aaKnown RBP27.59■■■□□ 2.01
PUF60-218ENST00000531995 ACIN1Q9UKV3 1341 aaKnown RBP27.59■■■□□ 2.01
PUF60-218ENST00000531995 PPLO60437 1756 aa27.58■■■□□ 2.01
PUF60-218ENST00000531995 ADGRL3Q9HAR2 1447 aa27.58■■■□□ 2
PUF60-218ENST00000531995 BRINP3Q76B58 766 aa27.57■■■□□ 2
PUF60-218ENST00000531995 SPATA31A6Q5VVP1 1343 aa27.53■■■□□ 2
PUF60-218ENST00000531995 FOXD1Q16676 465 aa27.52■■■□□ 2
PUF60-218ENST00000531995 MEX3CQ5U5Q3 659 aaKnown RBP27.52■■■□□ 2
PUF60-218ENST00000531995 PTCH1Q13635 1447 aa27.49■■□□□ 1.99
PUF60-218ENST00000531995 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.98
PUF60-218ENST00000531995 NUTM2BA6NNL0 878 aaPredicted RBP27.44■■□□□ 1.98
PUF60-218ENST00000531995 NUTM2EB1AL46 878 aaPredicted RBP27.44■■□□□ 1.98
PUF60-218ENST00000531995 NUTM2AQ8IVF1 878 aaPredicted RBP27.44■■□□□ 1.98
PUF60-218ENST00000531995 DDX17Q92841 729 aaKnown RBP27.44■■□□□ 1.98
PUF60-218ENST00000531995 ROBO2Q9HCK4 1378 aa27.44■■□□□ 1.98
PUF60-218ENST00000531995 IFT172Q9UG01 1749 aa27.44■■□□□ 1.98
PUF60-218ENST00000531995 C1orf167Q5SNV9 1468 aa27.4■■□□□ 1.98
PUF60-218ENST00000531995 VGFO15240 615 aaPredicted RBP27.4■■□□□ 1.98
PUF60-218ENST00000531995 LAMC1P11047 1609 aa27.39■■□□□ 1.98
PUF60-218ENST00000531995 PRAG1Q86YV5 1406 aa27.39■■□□□ 1.97
PUF60-218ENST00000531995 CCDC144AA2RUR9 1427 aa27.37■■□□□ 1.97
PUF60-218ENST00000531995 PNPLA6Q8IY17 1366 aa27.36■■□□□ 1.97
PUF60-218ENST00000531995 ZNF772Q68DY9 489 aaPredicted RBP27.36■■□□□ 1.97
PUF60-218ENST00000531995 RPGRIP1LQ68CZ1 1315 aa27.36■■□□□ 1.97
PUF60-218ENST00000531995 CDC42BPGQ6DT37 1551 aa27.34■■□□□ 1.97
PUF60-218ENST00000531995 ANKRD30BQ9BXX2 1392 aa27.33■■□□□ 1.97
PUF60-218ENST00000531995 KNDC1Q76NI1 1749 aa27.31■■□□□ 1.96
PUF60-218ENST00000531995 AFF2P51816 1311 aa27.31■■□□□ 1.96
PUF60-218ENST00000531995 SPATA31E1Q6ZUB1 1445 aa27.31■■□□□ 1.96
PUF60-218ENST00000531995 LRRC59Q96AG4 307 aaKnown RBP27.3■■□□□ 1.96
PUF60-218ENST00000531995 ADGRF5Q8IZF2 1346 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms