RNA–Protein interactions for RNA: ENST00000531939.5

IFT46-209, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-209ENST00000531939 NRG2O14511 850 aaPredicted RBP12.38□□□□□ -0.43
IFT46-209ENST00000531939 PRIM1P49642 420 aaKnown RBP12.38□□□□□ -0.43
IFT46-209ENST00000531939 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
IFT46-209ENST00000531939 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.37□□□□□ -0.43
IFT46-209ENST00000531939 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
IFT46-209ENST00000531939 RNF40O75150 1001 aa12.36□□□□□ -0.43
IFT46-209ENST00000531939 OSBPP22059 807 aa12.36□□□□□ -0.43
IFT46-209ENST00000531939 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
IFT46-209ENST00000531939 WDR62O43379 1518 aa12.34□□□□□ -0.43
IFT46-209ENST00000531939 GGCXP38435 758 aa12.34□□□□□ -0.43
IFT46-209ENST00000531939 SLC4A3P48751 1232 aa12.33□□□□□ -0.44
IFT46-209ENST00000531939 APLP1P51693 650 aa12.33□□□□□ -0.44
IFT46-209ENST00000531939 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
IFT46-209ENST00000531939 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
IFT46-209ENST00000531939 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
IFT46-209ENST00000531939 LCE2BO14633 110 aa12.3□□□□□ -0.44
IFT46-209ENST00000531939 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
IFT46-209ENST00000531939 TMUB1Q9BVT8 246 aa12.28□□□□□ -0.44
IFT46-209ENST00000531939 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
IFT46-209ENST00000531939 PRR14Q9BWN1 585 aa12.27□□□□□ -0.45
IFT46-209ENST00000531939 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
IFT46-209ENST00000531939 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
IFT46-209ENST00000531939 CFTRP13569 1480 aa12.26□□□□□ -0.45
IFT46-209ENST00000531939 FANCD2Q9BXW9 1451 aa12.26□□□□□ -0.45
IFT46-209ENST00000531939 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
IFT46-209ENST00000531939 PADI6Q6TGC4 694 aa12.25□□□□□ -0.45
IFT46-209ENST00000531939 NKX2-3Q8TAU0 364 aa12.25□□□□□ -0.45
IFT46-209ENST00000531939 NPDC1Q9NQX5 325 aaPredicted RBP12.25□□□□□ -0.45
IFT46-209ENST00000531939 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
IFT46-209ENST00000531939 COPS2P61201 443 aa12.24□□□□□ -0.45
IFT46-209ENST00000531939 PAXIP1Q6ZW49 1069 aaPredicted RBP12.22□□□□□ -0.45
IFT46-209ENST00000531939 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
IFT46-209ENST00000531939 ZPR1O75312 459 aa12.21□□□□□ -0.45
IFT46-209ENST00000531939 EYA1Q99502 592 aa12.21□□□□□ -0.45
IFT46-209ENST00000531939 URB2Q14146 1524 aaKnown RBP12.18□□□□□ -0.46
IFT46-209ENST00000531939 PCDHB3Q9Y5E6 796 aa12.18□□□□□ -0.46
IFT46-209ENST00000531939 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
IFT46-209ENST00000531939 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
IFT46-209ENST00000531939 DNAJB2P25686 324 aa12.12□□□□□ -0.47
IFT46-209ENST00000531939 SLC19A1P41440 591 aa12.12□□□□□ -0.47
IFT46-209ENST00000531939 RBM46Q8TBY0 533 aaKnown RBP12.11□□□□□ -0.47
IFT46-209ENST00000531939 RNF223E7ERA6 249 aa12.1□□□□□ -0.47
IFT46-209ENST00000531939 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
IFT46-209ENST00000531939 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
IFT46-209ENST00000531939 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
IFT46-209ENST00000531939 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
IFT46-209ENST00000531939 PTGDRQ13258 359 aa12.07□□□□□ -0.48
IFT46-209ENST00000531939 TMEM134Q9H6X4 195 aa12.07□□□□□ -0.48
IFT46-209ENST00000531939 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
IFT46-209ENST00000531939 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
IFT46-209ENST00000531939 DGAT1O75907 488 aa12.05□□□□□ -0.48
IFT46-209ENST00000531939 PKDCCQ504Y2 493 aa12.05□□□□□ -0.48
IFT46-209ENST00000531939 SPRYD7Q5W111 196 aa12.05□□□□□ -0.48
IFT46-209ENST00000531939 TRIM67Q6ZTA4 783 aa12.05□□□□□ -0.48
IFT46-209ENST00000531939 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
IFT46-209ENST00000531939 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
IFT46-209ENST00000531939 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 TOPBP1Q92547 1522 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 MLLT3P42568 568 aaPredicted RBP12.03□□□□□ -0.48
IFT46-209ENST00000531939 PRR20EP86478 221 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 PRR20CP86479 221 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 PRR20DP86480 221 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 PRR20BP86481 221 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 PRR20AP86496 221 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 ADGRG1Q9Y653 693 aa12.03□□□□□ -0.48
IFT46-209ENST00000531939 ZNF775Q96BV0 537 aaPredicted RBP12.01□□□□□ -0.49
IFT46-209ENST00000531939 RCCD1A6NED2 376 aa12□□□□□ -0.49
IFT46-209ENST00000531939 NR1I2O75469 434 aa12□□□□□ -0.49
IFT46-209ENST00000531939 EMID1Q96A84 441 aaPredicted RBP12□□□□□ -0.49
IFT46-209ENST00000531939 TLL1O43897 1013 aa11.99□□□□□ -0.49
IFT46-209ENST00000531939 CFHP08603 1231 aa11.99□□□□□ -0.49
IFT46-209ENST00000531939 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
IFT46-209ENST00000531939 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
IFT46-209ENST00000531939 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
IFT46-209ENST00000531939 S1PR4O95977 384 aa11.98□□□□□ -0.49
IFT46-209ENST00000531939 ADH1BP00325 375 aa11.98□□□□□ -0.49
IFT46-209ENST00000531939 MYT1Q01538 1121 aa11.98□□□□□ -0.49
IFT46-209ENST00000531939 DNMBPQ6XZF7 1577 aa11.97□□□□□ -0.49
IFT46-209ENST00000531939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.97□□□□□ -0.49
IFT46-209ENST00000531939 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
IFT46-209ENST00000531939 ZNF697Q5TEC3 545 aa11.97□□□□□ -0.49
IFT46-209ENST00000531939 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
IFT46-209ENST00000531939 ABCC8Q09428 1581 aa11.96□□□□□ -0.49
IFT46-209ENST00000531939 LIAT1Q6ZQX7 453 aa11.96□□□□□ -0.49
IFT46-209ENST00000531939 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
IFT46-209ENST00000531939 RSPH4AQ5TD94 716 aa11.95□□□□□ -0.5
IFT46-209ENST00000531939 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
IFT46-209ENST00000531939 FCHSD2O94868 740 aa11.94□□□□□ -0.5
IFT46-209ENST00000531939 KCNV2Q8TDN2 545 aa11.94□□□□□ -0.5
IFT46-209ENST00000531939 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
IFT46-209ENST00000531939 OATP04181 439 aa11.93□□□□□ -0.5
IFT46-209ENST00000531939 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
IFT46-209ENST00000531939 SLC10A3P09131 477 aa11.92□□□□□ -0.5
IFT46-209ENST00000531939 GDF9O60383 454 aa11.91□□□□□ -0.5
IFT46-209ENST00000531939 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.5
IFT46-209ENST00000531939 POLA1P09884 1462 aaPredicted RBP11.9□□□□□ -0.5
IFT46-209ENST00000531939 FAM187AA6NFU0 413 aa11.9□□□□□ -0.5
IFT46-209ENST00000531939 CHD1O14646 1710 aa11.9□□□□□ -0.5
IFT46-209ENST00000531939 FAM161AQ3B820 660 aa11.9□□□□□ -0.5
IFT46-209ENST00000531939 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms