RNA–Protein interactions for RNA: ENST00000531853.5

ACAT1-208, Transcript of acetyl-CoA acetyltransferase 1, human

TSL 4

Gene ACAT1, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACAT1-208	ENST00000531853	ADGRB3	O60242	1522 aa		28.87	■■■□□ 2.21
ACAT1-208	ENST00000531853	PTPN23	Q9H3S7	1636 aa		28.86	■■■□□ 2.21
ACAT1-208	ENST00000531853	NCOA3	Q9Y6Q9	1424 aa		28.84	■■■□□ 2.21
ACAT1-208	ENST00000531853	SPATA31A6	Q5VVP1	1343 aa		28.83	■■■□□ 2.21
ACAT1-208	ENST00000531853	ZNF772	Q68DY9	489 aa	Predicted RBP	28.82	■■■□□ 2.2
ACAT1-208	ENST00000531853	CHIC2	Q9UKJ5	165 aa		28.82	■■■□□ 2.2
ACAT1-208	ENST00000531853	PLEKHG1	Q9ULL1	1385 aa		28.82	■■■□□ 2.2
ACAT1-208	ENST00000531853	APLP2	Q06481	763 aa		28.8	■■■□□ 2.2
ACAT1-208	ENST00000531853	TBX22	Q9Y458	520 aa		28.8	■■■□□ 2.2
ACAT1-208	ENST00000531853	FGD6	Q6ZV73	1430 aa		28.79	■■■□□ 2.2
ACAT1-208	ENST00000531853	CHD2	O14647	1828 aa	Known RBP	28.79	■■■□□ 2.2
ACAT1-208	ENST00000531853	PPP1R15A	O75807	674 aa	Predicted RBP	28.79	■■■□□ 2.2
ACAT1-208	ENST00000531853	RPRD2	Q5VT52	1461 aa	Known RBP	28.78	■■■□□ 2.2
ACAT1-208	ENST00000531853	ZFYVE9	O95405	1425 aa		28.77	■■■□□ 2.2
ACAT1-208	ENST00000531853	MEX3C	Q5U5Q3	659 aa	Known RBP	28.77	■■■□□ 2.2
ACAT1-208	ENST00000531853	SETD1A	O15047	1707 aa	Known RBP	28.77	■■■□□ 2.2
ACAT1-208	ENST00000531853	LOC105371045	A0A1W2PR82	267 aa		28.76	■■■□□ 2.19
ACAT1-208	ENST00000531853	CADPS2	Q86UW7	1296 aa		28.75	■■■□□ 2.19
ACAT1-208	ENST00000531853	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
ACAT1-208	ENST00000531853	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.75	■■■□□ 2.19
ACAT1-208	ENST00000531853	COL16A1	Q07092	1604 aa	Predicted RBP	28.75	■■■□□ 2.19
ACAT1-208	ENST00000531853	C14orf37	Q86TY3	774 aa		28.74	■■■□□ 2.19
ACAT1-208	ENST00000531853	C19orf44	Q9H6X5	657 aa		28.74	■■■□□ 2.19
ACAT1-208	ENST00000531853	RIMS2	Q9UQ26	1411 aa		28.74	■■■□□ 2.19
ACAT1-208	ENST00000531853	ATF3	P18847	181 aa		28.71	■■■□□ 2.19
ACAT1-208	ENST00000531853	LRP6	O75581	1613 aa		28.69	■■■□□ 2.18
ACAT1-208	ENST00000531853	TRIM52	Q96A61	297 aa		28.68	■■■□□ 2.18
ACAT1-208	ENST00000531853	ADGRL2	O95490	1459 aa		28.67	■■■□□ 2.18
ACAT1-208	ENST00000531853	PIK3R4	Q99570	1358 aa		28.67	■■■□□ 2.18
ACAT1-208	ENST00000531853	RXRB	P28702	533 aa		28.67	■■■□□ 2.18
ACAT1-208	ENST00000531853	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.65	■■■□□ 2.18
ACAT1-208	ENST00000531853	TMEM131L	A2VDJ0	1609 aa		28.65	■■■□□ 2.18
ACAT1-208	ENST00000531853	ANKRD50	Q9ULJ7	1429 aa		28.64	■■■□□ 2.18
ACAT1-208	ENST00000531853	MYO5B	Q9ULV0	1848 aa		28.64	■■■□□ 2.17
ACAT1-208	ENST00000531853	SHPRH	Q149N8	1683 aa		28.62	■■■□□ 2.17
ACAT1-208	ENST00000531853	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.61	■■■□□ 2.17
ACAT1-208	ENST00000531853	CHGA	P10645	457 aa	Known RBP	28.61	■■■□□ 2.17
ACAT1-208	ENST00000531853	GCC2	Q8IWJ2	1684 aa		28.61	■■■□□ 2.17
ACAT1-208	ENST00000531853	ADAMTS13	Q76LX8	1427 aa		28.6	■■■□□ 2.17
ACAT1-208	ENST00000531853	DIP2A	Q14689	1571 aa		28.59	■■■□□ 2.17
ACAT1-208	ENST00000531853	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.59	■■■□□ 2.17
ACAT1-208	ENST00000531853	BRINP3	Q76B58	766 aa		28.57	■■■□□ 2.16
ACAT1-208	ENST00000531853	AMOTL2	Q9Y2J4	779 aa		28.56	■■■□□ 2.16
ACAT1-208	ENST00000531853	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.54	■■■□□ 2.16
ACAT1-208	ENST00000531853	NUTM2E	B1AL46	878 aa	Predicted RBP	28.54	■■■□□ 2.16
ACAT1-208	ENST00000531853	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.54	■■■□□ 2.16
ACAT1-208	ENST00000531853	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.54	■■■□□ 2.16
ACAT1-208	ENST00000531853	FAM50A	Q14320	339 aa	Known RBP	28.53	■■■□□ 2.16
ACAT1-208	ENST00000531853	DCC	P43146	1447 aa		28.52	■■■□□ 2.16
ACAT1-208	ENST00000531853	AFF2	P51816	1311 aa		28.5	■■■□□ 2.15
ACAT1-208	ENST00000531853	TRPM2	O94759	1503 aa		28.5	■■■□□ 2.15
ACAT1-208	ENST00000531853	LRRC59	Q96AG4	307 aa	Known RBP	28.5	■■■□□ 2.15
ACAT1-208	ENST00000531853	SETD5	Q9C0A6	1442 aa		28.49	■■■□□ 2.15
ACAT1-208	ENST00000531853	PTPRU	Q92729	1446 aa		28.45	■■■□□ 2.15
ACAT1-208	ENST00000531853	RBM6	P78332	1123 aa	Known RBP	28.44	■■■□□ 2.14
ACAT1-208	ENST00000531853	UNC13B	O14795	1591 aa		28.44	■■■□□ 2.14
ACAT1-208	ENST00000531853	QTRT2	Q9H974	415 aa	Known RBP	28.43	■■■□□ 2.14
ACAT1-208	ENST00000531853	ASXL1	Q8IXJ9	1541 aa		28.43	■■■□□ 2.14
ACAT1-208	ENST00000531853		E9PCH4	1651 aa		28.42	■■■□□ 2.14
ACAT1-208	ENST00000531853	MST1R	Q04912	1400 aa		28.4	■■■□□ 2.14
ACAT1-208	ENST00000531853	C8orf37	Q96NL8	207 aa		28.39	■■■□□ 2.14
ACAT1-208	ENST00000531853	NHSL1	Q5SYE7	1610 aa		28.36	■■■□□ 2.13
ACAT1-208	ENST00000531853	NGLY1	Q96IV0	654 aa		28.35	■■■□□ 2.13
ACAT1-208	ENST00000531853	IQGAP3	Q86VI3	1631 aa		28.35	■■■□□ 2.13
ACAT1-208	ENST00000531853	ROCK1	Q13464	1354 aa		28.35	■■■□□ 2.13
ACAT1-208	ENST00000531853	XRN1	Q8IZH2	1706 aa	Known RBP	28.34	■■■□□ 2.13
ACAT1-208	ENST00000531853	NUP155	O75694	1391 aa		28.34	■■■□□ 2.13
ACAT1-208	ENST00000531853	PNPLA6	Q8IY17	1366 aa		28.33	■■■□□ 2.13
ACAT1-208	ENST00000531853	RGS12	O14924	1447 aa		28.33	■■■□□ 2.13
ACAT1-208	ENST00000531853	SETBP1	Q9Y6X0	1596 aa		28.33	■■■□□ 2.12
ACAT1-208	ENST00000531853	FOXD1	Q16676	465 aa		28.3	■■■□□ 2.12
ACAT1-208	ENST00000531853	ADGRL3	Q9HAR2	1447 aa		28.29	■■■□□ 2.12
ACAT1-208	ENST00000531853	MET	P08581	1390 aa		28.28	■■■□□ 2.12
ACAT1-208	ENST00000531853	ZNF326	Q5BKZ1	582 aa	Known RBP	28.28	■■■□□ 2.12
ACAT1-208	ENST00000531853	NRXN3	Q9Y4C0	1643 aa		28.28	■■■□□ 2.12
ACAT1-208	ENST00000531853	DDX17	Q92841	729 aa	Known RBP	28.27	■■■□□ 2.12
ACAT1-208	ENST00000531853	ATAD2	Q6PL18	1390 aa		28.25	■■■□□ 2.11
ACAT1-208	ENST00000531853	ADAMTS2	O95450	1211 aa		28.24	■■■□□ 2.11
ACAT1-208	ENST00000531853	SRCAP	Q6ZRS2	3230 aa		28.24	■■■□□ 2.11
ACAT1-208	ENST00000531853	TRPC5	Q9UL62	973 aa	Predicted RBP	28.22	■■■□□ 2.11
ACAT1-208	ENST00000531853	USP21	Q9UK80	565 aa		28.21	■■■□□ 2.11
ACAT1-208	ENST00000531853	C1orf167	Q5SNV9	1468 aa		28.2	■■■□□ 2.1
ACAT1-208	ENST00000531853	SOS2	Q07890	1332 aa	Predicted RBP	28.19	■■■□□ 2.1
ACAT1-208	ENST00000531853	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.18	■■■□□ 2.1
ACAT1-208	ENST00000531853	ZRANB1	Q9UGI0	708 aa		28.18	■■■□□ 2.1
ACAT1-208	ENST00000531853	LAMC1	P11047	1609 aa		28.16	■■■□□ 2.1
ACAT1-208	ENST00000531853	PTCH1	Q13635	1447 aa		28.16	■■■□□ 2.1
ACAT1-208	ENST00000531853	CCDC125	Q86Z20	511 aa		28.15	■■■□□ 2.1
ACAT1-208	ENST00000531853	SPHKAP	Q2M3C7	1700 aa		28.15	■■■□□ 2.1
ACAT1-208	ENST00000531853	NALCN	Q8IZF0	1738 aa		28.14	■■■□□ 2.1
ACAT1-208	ENST00000531853	ORAI2	Q96SN7	254 aa		28.12	■■■□□ 2.09
ACAT1-208	ENST00000531853	NEXMIF	Q5QGS0	1516 aa		28.09	■■■□□ 2.09
ACAT1-208	ENST00000531853	VGF	O15240	615 aa	Predicted RBP	28.09	■■■□□ 2.09
ACAT1-208	ENST00000531853	ATRN	O75882	1429 aa		28.09	■■■□□ 2.09
ACAT1-208	ENST00000531853	ITGAE	P38570	1179 aa		28.07	■■■□□ 2.08
ACAT1-208	ENST00000531853	ROBO2	Q9HCK4	1378 aa		28.04	■■■□□ 2.08
ACAT1-208	ENST00000531853	PRAG1	Q86YV5	1406 aa		28.02	■■■□□ 2.08
ACAT1-208	ENST00000531853	NPHP3	Q7Z494	1330 aa		28.02	■■■□□ 2.08
ACAT1-208	ENST00000531853	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.02	■■■□□ 2.08
ACAT1-208	ENST00000531853	HFM1	A2PYH4	1435 aa		28.01	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms