RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
CHEK1-212ENST00000531607 COL16A1Q07092 1604 aaPredicted RBP16.59■□□□□ 0.25
CHEK1-212ENST00000531607 LOC105371045A0A1W2PR82 267 aa16.58■□□□□ 0.24
CHEK1-212ENST00000531607 IDI1Q13907 227 aa16.58■□□□□ 0.24
CHEK1-212ENST00000531607 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
CHEK1-212ENST00000531607 MSH6P52701 1360 aa16.57■□□□□ 0.24
CHEK1-212ENST00000531607 KCNA6P17658 529 aa16.57■□□□□ 0.24
CHEK1-212ENST00000531607 PROSER2Q86WR7 435 aaPredicted RBP16.57■□□□□ 0.24
CHEK1-212ENST00000531607 RBM33Q96EV2 1170 aaKnown RBP16.57■□□□□ 0.24
CHEK1-212ENST00000531607 RPRD2Q5VT52 1461 aaKnown RBP16.56■□□□□ 0.24
CHEK1-212ENST00000531607 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
CHEK1-212ENST00000531607 E9PCH4 1651 aa16.56■□□□□ 0.24
CHEK1-212ENST00000531607 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
CHEK1-212ENST00000531607 APLP2Q06481 763 aa16.55■□□□□ 0.24
CHEK1-212ENST00000531607 BCANQ96GW7 911 aa16.55■□□□□ 0.24
CHEK1-212ENST00000531607 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
CHEK1-212ENST00000531607 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
CHEK1-212ENST00000531607 UNC13BO14795 1591 aa16.55■□□□□ 0.24
CHEK1-212ENST00000531607 POTEAQ6S8J7 498 aa16.54■□□□□ 0.24
CHEK1-212ENST00000531607 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
CHEK1-212ENST00000531607 DIP2AQ14689 1571 aa16.52■□□□□ 0.24
CHEK1-212ENST00000531607 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
CHEK1-212ENST00000531607 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
CHEK1-212ENST00000531607 JCADQ9P266 1359 aa16.5■□□□□ 0.23
CHEK1-212ENST00000531607 PLEKHG1Q9ULL1 1385 aa16.5■□□□□ 0.23
CHEK1-212ENST00000531607 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
CHEK1-212ENST00000531607 IQGAP3Q86VI3 1631 aa16.48■□□□□ 0.23
CHEK1-212ENST00000531607 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
CHEK1-212ENST00000531607 PPP1R15AO75807 674 aaPredicted RBP16.48■□□□□ 0.23
CHEK1-212ENST00000531607 SLAIN2Q9P270 581 aa16.47■□□□□ 0.23
CHEK1-212ENST00000531607 LRP6O75581 1613 aa16.47■□□□□ 0.23
CHEK1-212ENST00000531607 TRPM2O94759 1503 aa16.45■□□□□ 0.22
CHEK1-212ENST00000531607 SPHKAPQ2M3C7 1700 aa16.45■□□□□ 0.22
CHEK1-212ENST00000531607 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
CHEK1-212ENST00000531607 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
CHEK1-212ENST00000531607 NHSL1Q5SYE7 1610 aa16.43■□□□□ 0.22
CHEK1-212ENST00000531607 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
CHEK1-212ENST00000531607 NCOA3Q9Y6Q9 1424 aa16.42■□□□□ 0.22
CHEK1-212ENST00000531607 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
CHEK1-212ENST00000531607 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
CHEK1-212ENST00000531607 ADAMTS13Q76LX8 1427 aa16.41■□□□□ 0.22
CHEK1-212ENST00000531607 CHGAP10645 457 aaKnown RBP16.4■□□□□ 0.22
CHEK1-212ENST00000531607 MEX3CQ5U5Q3 659 aaKnown RBP16.4■□□□□ 0.22
CHEK1-212ENST00000531607 SPATA31A6Q5VVP1 1343 aa16.4■□□□□ 0.22
CHEK1-212ENST00000531607 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
CHEK1-212ENST00000531607 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHEK1-212ENST00000531607 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
CHEK1-212ENST00000531607 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
CHEK1-212ENST00000531607 ASXL1Q8IXJ9 1541 aa16.37■□□□□ 0.21
CHEK1-212ENST00000531607 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
CHEK1-212ENST00000531607 KIF1BO60333 1816 aa16.37■□□□□ 0.21
CHEK1-212ENST00000531607 ATF3P18847 181 aa16.36■□□□□ 0.21
CHEK1-212ENST00000531607 CADPS2Q86UW7 1296 aa16.36■□□□□ 0.21
CHEK1-212ENST00000531607 SETBP1Q9Y6X0 1596 aa16.35■□□□□ 0.21
CHEK1-212ENST00000531607 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
CHEK1-212ENST00000531607 ZNF772Q68DY9 489 aaPredicted RBP16.34■□□□□ 0.21
CHEK1-212ENST00000531607 DCCP43146 1447 aa16.34■□□□□ 0.21
CHEK1-212ENST00000531607 C19orf44Q9H6X5 657 aa16.33■□□□□ 0.2
CHEK1-212ENST00000531607 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
CHEK1-212ENST00000531607 CDK12Q9NYV4 1490 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-212ENST00000531607 ROCK1Q13464 1354 aa16.3■□□□□ 0.2
CHEK1-212ENST00000531607 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
CHEK1-212ENST00000531607 NUTM2BA6NNL0 878 aaPredicted RBP16.29■□□□□ 0.2
CHEK1-212ENST00000531607 NUTM2EB1AL46 878 aaPredicted RBP16.29■□□□□ 0.2
CHEK1-212ENST00000531607 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
CHEK1-212ENST00000531607 NUTM2AQ8IVF1 878 aaPredicted RBP16.29■□□□□ 0.2
CHEK1-212ENST00000531607 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
CHEK1-212ENST00000531607 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
CHEK1-212ENST00000531607 MST1RQ04912 1400 aa16.28■□□□□ 0.2
CHEK1-212ENST00000531607 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.19
CHEK1-212ENST00000531607 LAMC1P11047 1609 aa16.27■□□□□ 0.19
CHEK1-212ENST00000531607 NUP155O75694 1391 aa16.26■□□□□ 0.19
CHEK1-212ENST00000531607 NEXMIFQ5QGS0 1516 aa16.26■□□□□ 0.19
CHEK1-212ENST00000531607 MARF1Q9Y4F3 1742 aaKnown RBP16.26■□□□□ 0.19
CHEK1-212ENST00000531607 RXRBP28702 533 aa16.26■□□□□ 0.19
CHEK1-212ENST00000531607 ADGRL3Q9HAR2 1447 aa16.25■□□□□ 0.19
CHEK1-212ENST00000531607 AFF2P51816 1311 aa16.24■□□□□ 0.19
CHEK1-212ENST00000531607 EP400Q96L91 3159 aa16.24■□□□□ 0.19
CHEK1-212ENST00000531607 RGS12O14924 1447 aa16.23■□□□□ 0.19
CHEK1-212ENST00000531607 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
CHEK1-212ENST00000531607 PPLO60437 1756 aa16.22■□□□□ 0.19
CHEK1-212ENST00000531607 METP08581 1390 aa16.22■□□□□ 0.19
CHEK1-212ENST00000531607 ZNF326Q5BKZ1 582 aaKnown RBP16.21■□□□□ 0.19
CHEK1-212ENST00000531607 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.18
CHEK1-212ENST00000531607 ITGAEP38570 1179 aa16.2■□□□□ 0.18
CHEK1-212ENST00000531607 PNPLA6Q8IY17 1366 aa16.2■□□□□ 0.18
CHEK1-212ENST00000531607 LRRC59Q96AG4 307 aaKnown RBP16.19■□□□□ 0.18
CHEK1-212ENST00000531607 C8orf37Q96NL8 207 aa16.19■□□□□ 0.18
CHEK1-212ENST00000531607 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
CHEK1-212ENST00000531607 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
CHEK1-212ENST00000531607 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
CHEK1-212ENST00000531607 C1orf167Q5SNV9 1468 aa16.16■□□□□ 0.18
CHEK1-212ENST00000531607 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
CHEK1-212ENST00000531607 RBM6P78332 1123 aaKnown RBP16.14■□□□□ 0.17
CHEK1-212ENST00000531607 QTRT2Q9H974 415 aaKnown RBP16.13■□□□□ 0.17
CHEK1-212ENST00000531607 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.12■□□□□ 0.17
CHEK1-212ENST00000531607 ADAMTS2O95450 1211 aa16.12■□□□□ 0.17
CHEK1-212ENST00000531607 CDC42BPGQ6DT37 1551 aa16.12■□□□□ 0.17
CHEK1-212ENST00000531607 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
CHEK1-212ENST00000531607 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms