RNA–Protein interactions for RNA: ENST00000531597.1

PACS1-212, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-212ENST00000531597 PHLPP1O60346 1717 aa23.42■■□□□ 1.34
PACS1-212ENST00000531597 SLC52A1Q9NWF4 448 aa23.42■■□□□ 1.34
PACS1-212ENST00000531597 BCANQ96GW7 911 aa23.41■■□□□ 1.34
PACS1-212ENST00000531597 ANKRD30AQ9BXX3 1397 aa23.4■■□□□ 1.34
PACS1-212ENST00000531597 ZFYVE9O95405 1425 aa23.38■■□□□ 1.33
PACS1-212ENST00000531597 PLEKHG1Q9ULL1 1385 aa23.37■■□□□ 1.33
PACS1-212ENST00000531597 FGD6Q6ZV73 1430 aa23.36■■□□□ 1.33
PACS1-212ENST00000531597 COL16A1Q07092 1604 aaPredicted RBP23.36■■□□□ 1.33
PACS1-212ENST00000531597 CHD2O14647 1828 aaKnown RBP23.36■■□□□ 1.33
PACS1-212ENST00000531597 LRP6O75581 1613 aa23.35■■□□□ 1.33
PACS1-212ENST00000531597 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.32
PACS1-212ENST00000531597 UPF1Q92900 1129 aaKnown RBP eCLIP23.32■■□□□ 1.32
PACS1-212ENST00000531597 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
PACS1-212ENST00000531597 NCOA3Q9Y6Q9 1424 aa23.32■■□□□ 1.32
PACS1-212ENST00000531597 SPATA31A6Q5VVP1 1343 aa23.32■■□□□ 1.32
PACS1-212ENST00000531597 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
PACS1-212ENST00000531597 PPP1R15AO75807 674 aaPredicted RBP23.3■■□□□ 1.32
PACS1-212ENST00000531597 MYO5BQ9ULV0 1848 aa23.3■■□□□ 1.32
PACS1-212ENST00000531597 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
PACS1-212ENST00000531597 ZNF772Q68DY9 489 aaPredicted RBP23.28■■□□□ 1.32
PACS1-212ENST00000531597 TMEM131LA2VDJ0 1609 aa23.28■■□□□ 1.32
PACS1-212ENST00000531597 ADGRL2O95490 1459 aa23.28■■□□□ 1.32
PACS1-212ENST00000531597 MEX3CQ5U5Q3 659 aaKnown RBP23.27■■□□□ 1.32
PACS1-212ENST00000531597 TRIM52Q96A61 297 aa23.27■■□□□ 1.32
PACS1-212ENST00000531597 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
PACS1-212ENST00000531597 ADAMTS13Q76LX8 1427 aa23.25■■□□□ 1.31
PACS1-212ENST00000531597 APLP2Q06481 763 aa23.25■■□□□ 1.31
PACS1-212ENST00000531597 C14orf37Q86TY3 774 aa23.25■■□□□ 1.31
PACS1-212ENST00000531597 CADPS2Q86UW7 1296 aa23.25■■□□□ 1.31
PACS1-212ENST00000531597 C19orf44Q9H6X5 657 aa23.25■■□□□ 1.31
PACS1-212ENST00000531597 AHDC1Q5TGY3 1603 aaPredicted RBP23.25■■□□□ 1.31
PACS1-212ENST00000531597 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
PACS1-212ENST00000531597 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.23■■□□□ 1.31
PACS1-212ENST00000531597 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
PACS1-212ENST00000531597 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.23■■□□□ 1.31
PACS1-212ENST00000531597 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
PACS1-212ENST00000531597 ATF3P18847 181 aa23.21■■□□□ 1.31
PACS1-212ENST00000531597 CHGAP10645 457 aaKnown RBP23.2■■□□□ 1.3
PACS1-212ENST00000531597 RXRBP28702 533 aa23.2■■□□□ 1.3
PACS1-212ENST00000531597 PIK3R4Q99570 1358 aa23.19■■□□□ 1.3
PACS1-212ENST00000531597 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
PACS1-212ENST00000531597 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
PACS1-212ENST00000531597 PTPRUQ92729 1446 aa23.16■■□□□ 1.3
PACS1-212ENST00000531597 NUTM2BA6NNL0 878 aaPredicted RBP23.16■■□□□ 1.3
PACS1-212ENST00000531597 NUTM2EB1AL46 878 aaPredicted RBP23.16■■□□□ 1.3
PACS1-212ENST00000531597 NUTM2AQ8IVF1 878 aaPredicted RBP23.16■■□□□ 1.3
PACS1-212ENST00000531597 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
PACS1-212ENST00000531597 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
PACS1-212ENST00000531597 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
PACS1-212ENST00000531597 AFF2P51816 1311 aa23.11■■□□□ 1.29
PACS1-212ENST00000531597 UNC13BO14795 1591 aa23.11■■□□□ 1.29
PACS1-212ENST00000531597 E9PCH4 1651 aa23.11■■□□□ 1.29
PACS1-212ENST00000531597 TRPM2O94759 1503 aa23.1■■□□□ 1.29
PACS1-212ENST00000531597 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
PACS1-212ENST00000531597 DCCP43146 1447 aa23.08■■□□□ 1.29
PACS1-212ENST00000531597 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.29
PACS1-212ENST00000531597 MST1RQ04912 1400 aa23.07■■□□□ 1.28
PACS1-212ENST00000531597 LRRC59Q96AG4 307 aaKnown RBP23.04■■□□□ 1.28
PACS1-212ENST00000531597 XRN1Q8IZH2 1706 aaKnown RBP23.03■■□□□ 1.28
PACS1-212ENST00000531597 RGS12O14924 1447 aa23.03■■□□□ 1.28
PACS1-212ENST00000531597 NRXN3Q9Y4C0 1643 aa23.03■■□□□ 1.28
PACS1-212ENST00000531597 NHSL1Q5SYE7 1610 aa23.02■■□□□ 1.28
PACS1-212ENST00000531597 IQGAP3Q86VI3 1631 aa23.02■■□□□ 1.28
PACS1-212ENST00000531597 DDX17Q92841 729 aaKnown RBP23.02■■□□□ 1.28
PACS1-212ENST00000531597 C8orf37Q96NL8 207 aa23.02■■□□□ 1.28
PACS1-212ENST00000531597 QTRT2Q9H974 415 aaKnown RBP23.02■■□□□ 1.28
PACS1-212ENST00000531597 RBM6P78332 1123 aaKnown RBP23.01■■□□□ 1.27
PACS1-212ENST00000531597 PNPLA6Q8IY17 1366 aa23.01■■□□□ 1.27
PACS1-212ENST00000531597 METP08581 1390 aa23■■□□□ 1.27
PACS1-212ENST00000531597 SETBP1Q9Y6X0 1596 aa22.99■■□□□ 1.27
PACS1-212ENST00000531597 NUP155O75694 1391 aa22.99■■□□□ 1.27
PACS1-212ENST00000531597 ROCK1Q13464 1354 aa22.98■■□□□ 1.27
PACS1-212ENST00000531597 SRCAPQ6ZRS2 3230 aa22.95■■□□□ 1.26
PACS1-212ENST00000531597 ADGRL3Q9HAR2 1447 aa22.94■■□□□ 1.26
PACS1-212ENST00000531597 NGLY1Q96IV0 654 aa22.92■■□□□ 1.26
PACS1-212ENST00000531597 ADAMTS2O95450 1211 aa22.91■■□□□ 1.26
PACS1-212ENST00000531597 ZNF326Q5BKZ1 582 aaKnown RBP22.91■■□□□ 1.26
PACS1-212ENST00000531597 NALCNQ8IZF0 1738 aa22.89■■□□□ 1.26
PACS1-212ENST00000531597 C1orf167Q5SNV9 1468 aa22.89■■□□□ 1.25
PACS1-212ENST00000531597 ATAD2Q6PL18 1390 aa22.86■■□□□ 1.25
PACS1-212ENST00000531597 SPHKAPQ2M3C7 1700 aa22.85■■□□□ 1.25
PACS1-212ENST00000531597 SOS2Q07890 1332 aaPredicted RBP22.85■■□□□ 1.25
PACS1-212ENST00000531597 ORAI2Q96SN7 254 aa22.85■■□□□ 1.25
PACS1-212ENST00000531597 USP21Q9UK80 565 aa22.85■■□□□ 1.25
PACS1-212ENST00000531597 LAMC1P11047 1609 aa22.85■■□□□ 1.25
PACS1-212ENST00000531597 NEXMIFQ5QGS0 1516 aa22.84■■□□□ 1.25
PACS1-212ENST00000531597 FNBP4Q8N3X1 1017 aaPredicted RBP22.83■■□□□ 1.25
PACS1-212ENST00000531597 TRPC5Q9UL62 973 aaPredicted RBP22.83■■□□□ 1.25
PACS1-212ENST00000531597 ITGAEP38570 1179 aa22.82■■□□□ 1.24
PACS1-212ENST00000531597 ROBO2Q9HCK4 1378 aa22.8■■□□□ 1.24
PACS1-212ENST00000531597 PTCH1Q13635 1447 aa22.8■■□□□ 1.24
PACS1-212ENST00000531597 CLTCL1P53675 1640 aa22.79■■□□□ 1.24
PACS1-212ENST00000531597 ATRNO75882 1429 aa22.79■■□□□ 1.24
PACS1-212ENST00000531597 ZRANB1Q9UGI0 708 aa22.76■■□□□ 1.23
PACS1-212ENST00000531597 COL22A1Q8NFW1 1626 aaPredicted RBP22.74■■□□□ 1.23
PACS1-212ENST00000531597 EP400Q96L91 3159 aa22.73■■□□□ 1.23
PACS1-212ENST00000531597 PRAG1Q86YV5 1406 aa22.73■■□□□ 1.23
PACS1-212ENST00000531597 MYOM2P54296 1465 aa22.73■■□□□ 1.23
PACS1-212ENST00000531597 BCL9LQ86UU0 1499 aa22.73■■□□□ 1.23
PACS1-212ENST00000531597 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms