RNA–Protein interactions for RNA: ENST00000531593.1

GPAA1-216, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-216ENST00000531593 GCC2Q8IWJ2 1684 aa24.96■■□□□ 1.59
GPAA1-216ENST00000531593 RIMS2Q9UQ26 1411 aa24.95■■□□□ 1.59
GPAA1-216ENST00000531593 E9PCH4 1651 aa24.94■■□□□ 1.58
GPAA1-216ENST00000531593 KCNA6P17658 529 aa24.94■■□□□ 1.58
GPAA1-216ENST00000531593 IQGAP3Q86VI3 1631 aa24.94■■□□□ 1.58
GPAA1-216ENST00000531593 ZFYVE9O95405 1425 aa24.93■■□□□ 1.58
GPAA1-216ENST00000531593 PROSER2Q86WR7 435 aaPredicted RBP24.92■■□□□ 1.58
GPAA1-216ENST00000531593 RRBP1Q9P2E9 1410 aaKnown RBP24.92■■□□□ 1.58
GPAA1-216ENST00000531593 TMEM94Q12767 1356 aa24.92■■□□□ 1.58
GPAA1-216ENST00000531593 TMEM131LA2VDJ0 1609 aa24.9■■□□□ 1.58
GPAA1-216ENST00000531593 MYO5BQ9ULV0 1848 aa24.9■■□□□ 1.58
GPAA1-216ENST00000531593 HDGFP51858 240 aaKnown RBP24.89■■□□□ 1.58
GPAA1-216ENST00000531593 PLEKHG1Q9ULL1 1385 aa24.89■■□□□ 1.57
GPAA1-216ENST00000531593 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.85■■□□□ 1.57
GPAA1-216ENST00000531593 XIRP1Q702N8 1843 aaKnown RBP24.84■■□□□ 1.57
GPAA1-216ENST00000531593 NAIPQ13075 1403 aa24.82■■□□□ 1.56
GPAA1-216ENST00000531593 MED1Q15648 1581 aaPredicted RBP24.81■■□□□ 1.56
GPAA1-216ENST00000531593 TRIM52Q96A61 297 aa24.8■■□□□ 1.56
GPAA1-216ENST00000531593 NWD1Q149M9 1564 aa24.8■■□□□ 1.56
GPAA1-216ENST00000531593 ZNF326Q5BKZ1 582 aaKnown RBP24.79■■□□□ 1.56
GPAA1-216ENST00000531593 TBX22Q9Y458 520 aa24.79■■□□□ 1.56
GPAA1-216ENST00000531593 NKTRP30414 1462 aaKnown RBP24.78■■□□□ 1.56
GPAA1-216ENST00000531593 ADAMTS13Q76LX8 1427 aa24.78■■□□□ 1.56
GPAA1-216ENST00000531593 SOCS7O14512 581 aa24.77■■□□□ 1.56
GPAA1-216ENST00000531593 MSH6P52701 1360 aa24.75■■□□□ 1.55
GPAA1-216ENST00000531593 PHF23Q9BUL5 403 aaPredicted RBP24.74■■□□□ 1.55
GPAA1-216ENST00000531593 C14orf37Q86TY3 774 aa24.73■■□□□ 1.55
GPAA1-216ENST00000531593 SPHKAPQ2M3C7 1700 aa24.72■■□□□ 1.55
GPAA1-216ENST00000531593 FAM135BQ49AJ0 1406 aa24.72■■□□□ 1.55
GPAA1-216ENST00000531593 HFM1A2PYH4 1435 aa24.7■■□□□ 1.55
GPAA1-216ENST00000531593 CHD2O14647 1828 aaKnown RBP24.7■■□□□ 1.54
GPAA1-216ENST00000531593 AMOTL2Q9Y2J4 779 aa24.68■■□□□ 1.54
GPAA1-216ENST00000531593 CLTCL1P53675 1640 aa24.68■■□□□ 1.54
GPAA1-216ENST00000531593 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
GPAA1-216ENST00000531593 SLAIN2Q9P270 581 aa24.67■■□□□ 1.54
GPAA1-216ENST00000531593 PTPRUQ92729 1446 aa24.67■■□□□ 1.54
GPAA1-216ENST00000531593 DIP2AQ14689 1571 aa24.66■■□□□ 1.54
GPAA1-216ENST00000531593 ROBO1Q9Y6N7 1651 aa24.66■■□□□ 1.54
GPAA1-216ENST00000531593 TRPM2O94759 1503 aa24.65■■□□□ 1.54
GPAA1-216ENST00000531593 PIK3R4Q99570 1358 aa24.64■■□□□ 1.53
GPAA1-216ENST00000531593 FOXD1Q16676 465 aa24.63■■□□□ 1.53
GPAA1-216ENST00000531593 METP08581 1390 aa24.6■■□□□ 1.53
GPAA1-216ENST00000531593 NRXN3Q9Y4C0 1643 aa24.6■■□□□ 1.53
GPAA1-216ENST00000531593 ATF3P18847 181 aa24.59■■□□□ 1.53
GPAA1-216ENST00000531593 SETBP1Q9Y6X0 1596 aa24.59■■□□□ 1.53
GPAA1-216ENST00000531593 NEXMIFQ5QGS0 1516 aa24.58■■□□□ 1.53
GPAA1-216ENST00000531593 C19orf44Q9H6X5 657 aa24.58■■□□□ 1.53
GPAA1-216ENST00000531593 NCOA3Q9Y6Q9 1424 aa24.58■■□□□ 1.53
GPAA1-216ENST00000531593 CADPS2Q86UW7 1296 aa24.55■■□□□ 1.52
GPAA1-216ENST00000531593 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.52■■□□□ 1.52
GPAA1-216ENST00000531593 KIF1BO60333 1816 aa24.52■■□□□ 1.52
GPAA1-216ENST00000531593 RGS17Q9UGC6 210 aaPredicted RBP24.52■■□□□ 1.52
GPAA1-216ENST00000531593 PHLPP1O60346 1717 aa24.51■■□□□ 1.51
GPAA1-216ENST00000531593 XRN1Q8IZH2 1706 aaKnown RBP24.5■■□□□ 1.51
GPAA1-216ENST00000531593 VGFO15240 615 aaPredicted RBP24.5■■□□□ 1.51
GPAA1-216ENST00000531593 MPHOSPH9Q99550 1183 aa24.49■■□□□ 1.51
GPAA1-216ENST00000531593 JCADQ9P266 1359 aa24.47■■□□□ 1.51
GPAA1-216ENST00000531593 RGL3Q3MIN7 710 aa24.47■■□□□ 1.51
GPAA1-216ENST00000531593 RPGRIP1LQ68CZ1 1315 aa24.46■■□□□ 1.51
GPAA1-216ENST00000531593 BRINP3Q76B58 766 aa24.46■■□□□ 1.51
GPAA1-216ENST00000531593 CCDC144AA2RUR9 1427 aa24.44■■□□□ 1.5
GPAA1-216ENST00000531593 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
GPAA1-216ENST00000531593 POTEAQ6S8J7 498 aa24.42■■□□□ 1.5
GPAA1-216ENST00000531593 DCCP43146 1447 aa24.41■■□□□ 1.5
GPAA1-216ENST00000531593 MST1RQ04912 1400 aa24.41■■□□□ 1.5
GPAA1-216ENST00000531593 ADGRL3Q9HAR2 1447 aa24.41■■□□□ 1.5
GPAA1-216ENST00000531593 ADGRF5Q8IZF2 1346 aa24.4■■□□□ 1.5
GPAA1-216ENST00000531593 ROBO2Q9HCK4 1378 aa24.4■■□□□ 1.5
GPAA1-216ENST00000531593 SETD5Q9C0A6 1442 aa24.39■■□□□ 1.5
GPAA1-216ENST00000531593 DDX17Q92841 729 aaKnown RBP24.39■■□□□ 1.49
GPAA1-216ENST00000531593 AHDC1Q5TGY3 1603 aaPredicted RBP24.38■■□□□ 1.49
GPAA1-216ENST00000531593 ASXL1Q8IXJ9 1541 aa24.36■■□□□ 1.49
GPAA1-216ENST00000531593 MEX3CQ5U5Q3 659 aaKnown RBP24.36■■□□□ 1.49
GPAA1-216ENST00000531593 PPLO60437 1756 aa24.36■■□□□ 1.49
GPAA1-216ENST00000531593 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
GPAA1-216ENST00000531593 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
GPAA1-216ENST00000531593 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
GPAA1-216ENST00000531593 SETD1AO15047 1707 aaKnown RBP24.35■■□□□ 1.49
GPAA1-216ENST00000531593 STK26Q9P289 416 aa24.34■■□□□ 1.49
GPAA1-216ENST00000531593 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
GPAA1-216ENST00000531593 LRP6O75581 1613 aa24.34■■□□□ 1.49
GPAA1-216ENST00000531593 PTCH1Q13635 1447 aa24.34■■□□□ 1.49
GPAA1-216ENST00000531593 SPATA31E1Q6ZUB1 1445 aa24.34■■□□□ 1.49
GPAA1-216ENST00000531593 SPATA31A6Q5VVP1 1343 aa24.33■■□□□ 1.48
GPAA1-216ENST00000531593 RAB3GAP2Q9H2M9 1393 aa24.32■■□□□ 1.48
GPAA1-216ENST00000531593 TMEM132EQ6IEE7 984 aa24.29■■□□□ 1.48
GPAA1-216ENST00000531593 C1orf167Q5SNV9 1468 aa24.29■■□□□ 1.48
GPAA1-216ENST00000531593 ANKRD30BQ9BXX2 1392 aa24.29■■□□□ 1.48
GPAA1-216ENST00000531593 ORAI2Q96SN7 254 aa24.28■■□□□ 1.48
GPAA1-216ENST00000531593 WAPLQ7Z5K2 1190 aa24.26■■□□□ 1.47
GPAA1-216ENST00000531593 LRRC59Q96AG4 307 aaKnown RBP24.25■■□□□ 1.47
GPAA1-216ENST00000531593 SHPRHQ149N8 1683 aa24.24■■□□□ 1.47
GPAA1-216ENST00000531593 ACIN1Q9UKV3 1341 aaKnown RBP24.23■■□□□ 1.47
GPAA1-216ENST00000531593 PRAG1Q86YV5 1406 aa24.23■■□□□ 1.47
GPAA1-216ENST00000531593 NHSL1Q5SYE7 1610 aa24.23■■□□□ 1.47
GPAA1-216ENST00000531593 NUTM2FA1L443 756 aa24.22■■□□□ 1.47
GPAA1-216ENST00000531593 PIK3C2GO75747 1445 aa24.21■■□□□ 1.47
GPAA1-216ENST00000531593 LRPPRCP42704 1394 aaKnown RBP24.21■■□□□ 1.47
GPAA1-216ENST00000531593 PLEKHH1Q9ULM0 1364 aa24.21■■□□□ 1.47
GPAA1-216ENST00000531593 IFT172Q9UG01 1749 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms