RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 HSPA1LP34931 641 aa19.91■□□□□ 0.78
SF3B2-212ENST00000531589 E9PCH4 1651 aa19.89■□□□□ 0.77
SF3B2-212ENST00000531589 RIMS2Q9UQ26 1411 aa19.89■□□□□ 0.77
SF3B2-212ENST00000531589 ZFYVE9O95405 1425 aa19.88■□□□□ 0.77
SF3B2-212ENST00000531589 PLEKHG1Q9ULL1 1385 aa19.88■□□□□ 0.77
SF3B2-212ENST00000531589 TMEM131LA2VDJ0 1609 aa19.87■□□□□ 0.77
SF3B2-212ENST00000531589 PROSER2Q86WR7 435 aaPredicted RBP19.86■□□□□ 0.77
SF3B2-212ENST00000531589 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
SF3B2-212ENST00000531589 ALKQ9UM73 1620 aa19.84■□□□□ 0.77
SF3B2-212ENST00000531589 TBX22Q9Y458 520 aa19.83■□□□□ 0.77
SF3B2-212ENST00000531589 NKTRP30414 1462 aaKnown RBP19.83■□□□□ 0.76
SF3B2-212ENST00000531589 NAIPQ13075 1403 aa19.82■□□□□ 0.76
SF3B2-212ENST00000531589 ILDR2Q71H61 639 aa19.8■□□□□ 0.76
SF3B2-212ENST00000531589 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
SF3B2-212ENST00000531589 NWD1Q149M9 1564 aa19.79■□□□□ 0.76
SF3B2-212ENST00000531589 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
SF3B2-212ENST00000531589 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
SF3B2-212ENST00000531589 MSH6P52701 1360 aa19.77■□□□□ 0.76
SF3B2-212ENST00000531589 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
SF3B2-212ENST00000531589 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
SF3B2-212ENST00000531589 XIRP1Q702N8 1843 aaKnown RBP19.76■□□□□ 0.75
SF3B2-212ENST00000531589 PIK3R4Q99570 1358 aa19.76■□□□□ 0.75
SF3B2-212ENST00000531589 ZNF326Q5BKZ1 582 aaKnown RBP19.76■□□□□ 0.75
SF3B2-212ENST00000531589 TRIM52Q96A61 297 aa19.76■□□□□ 0.75
SF3B2-212ENST00000531589 RBM33Q96EV2 1170 aaKnown RBP19.75■□□□□ 0.75
SF3B2-212ENST00000531589 SPHKAPQ2M3C7 1700 aa19.75■□□□□ 0.75
SF3B2-212ENST00000531589 DIP2AQ14689 1571 aa19.74■□□□□ 0.75
SF3B2-212ENST00000531589 ADAMTS13Q76LX8 1427 aa19.74■□□□□ 0.75
SF3B2-212ENST00000531589 SOCS7O14512 581 aa19.73■□□□□ 0.75
SF3B2-212ENST00000531589 NCOA3Q9Y6Q9 1424 aa19.73■□□□□ 0.75
SF3B2-212ENST00000531589 CHD2O14647 1828 aaKnown RBP19.72■□□□□ 0.75
SF3B2-212ENST00000531589 C14orf37Q86TY3 774 aa19.71■□□□□ 0.75
SF3B2-212ENST00000531589 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
SF3B2-212ENST00000531589 MED1Q15648 1581 aaPredicted RBP19.7■□□□□ 0.74
SF3B2-212ENST00000531589 TRPM2O94759 1503 aa19.7■□□□□ 0.74
SF3B2-212ENST00000531589 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
SF3B2-212ENST00000531589 SLAIN2Q9P270 581 aa19.69■□□□□ 0.74
SF3B2-212ENST00000531589 AMOTL2Q9Y2J4 779 aa19.68■□□□□ 0.74
SF3B2-212ENST00000531589 C19orf44Q9H6X5 657 aa19.66■□□□□ 0.74
SF3B2-212ENST00000531589 CLTCL1P53675 1640 aa19.65■□□□□ 0.74
SF3B2-212ENST00000531589 CADPS2Q86UW7 1296 aa19.65■□□□□ 0.74
SF3B2-212ENST00000531589 ACIN1Q9UKV3 1341 aaKnown RBP19.65■□□□□ 0.74
SF3B2-212ENST00000531589 SETBP1Q9Y6X0 1596 aa19.65■□□□□ 0.74
SF3B2-212ENST00000531589 VGFO15240 615 aaPredicted RBP19.64■□□□□ 0.73
SF3B2-212ENST00000531589 ATF3P18847 181 aa19.64■□□□□ 0.73
SF3B2-212ENST00000531589 ROBO1Q9Y6N7 1651 aa19.63■□□□□ 0.73
SF3B2-212ENST00000531589 RPGRIP1LQ68CZ1 1315 aa19.62■□□□□ 0.73
SF3B2-212ENST00000531589 KIF1BO60333 1816 aa19.62■□□□□ 0.73
SF3B2-212ENST00000531589 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
SF3B2-212ENST00000531589 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
SF3B2-212ENST00000531589 NRXN3Q9Y4C0 1643 aa19.58■□□□□ 0.73
SF3B2-212ENST00000531589 METP08581 1390 aa19.57■□□□□ 0.72
SF3B2-212ENST00000531589 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
SF3B2-212ENST00000531589 DCCP43146 1447 aa19.56■□□□□ 0.72
SF3B2-212ENST00000531589 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.55■□□□□ 0.72
SF3B2-212ENST00000531589 XRN1Q8IZH2 1706 aaKnown RBP19.54■□□□□ 0.72
SF3B2-212ENST00000531589 CCDC144AA2RUR9 1427 aa19.54■□□□□ 0.72
SF3B2-212ENST00000531589 FOXD1Q16676 465 aa19.54■□□□□ 0.72
SF3B2-212ENST00000531589 JCADQ9P266 1359 aa19.54■□□□□ 0.72
SF3B2-212ENST00000531589 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
SF3B2-212ENST00000531589 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
SF3B2-212ENST00000531589 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
SF3B2-212ENST00000531589 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
SF3B2-212ENST00000531589 RGL3Q3MIN7 710 aa19.47■□□□□ 0.71
SF3B2-212ENST00000531589 SPATA31A6Q5VVP1 1343 aa19.47■□□□□ 0.71
SF3B2-212ENST00000531589 ANKRD30BQ9BXX2 1392 aa19.46■□□□□ 0.71
SF3B2-212ENST00000531589 PTCH1Q13635 1447 aa19.46■□□□□ 0.71
SF3B2-212ENST00000531589 RGS17Q9UGC6 210 aaPredicted RBP19.46■□□□□ 0.71
SF3B2-212ENST00000531589 AHDC1Q5TGY3 1603 aaPredicted RBP19.46■□□□□ 0.71
SF3B2-212ENST00000531589 MST1RQ04912 1400 aa19.45■□□□□ 0.7
SF3B2-212ENST00000531589 COL16A1Q07092 1604 aaPredicted RBP19.45■□□□□ 0.7
SF3B2-212ENST00000531589 PPLO60437 1756 aa19.44■□□□□ 0.7
SF3B2-212ENST00000531589 SPATA31E1Q6ZUB1 1445 aa19.43■□□□□ 0.7
SF3B2-212ENST00000531589 PRAG1Q86YV5 1406 aa19.43■□□□□ 0.7
SF3B2-212ENST00000531589 ROBO2Q9HCK4 1378 aa19.42■□□□□ 0.7
SF3B2-212ENST00000531589 ADGRF5Q8IZF2 1346 aa19.41■□□□□ 0.7
SF3B2-212ENST00000531589 ASXL1Q8IXJ9 1541 aa19.41■□□□□ 0.7
SF3B2-212ENST00000531589 SETD1AO15047 1707 aaKnown RBP19.4■□□□□ 0.7
SF3B2-212ENST00000531589 LRRC59Q96AG4 307 aaKnown RBP19.4■□□□□ 0.7
SF3B2-212ENST00000531589 RAB3GAP2Q9H2M9 1393 aa19.4■□□□□ 0.7
SF3B2-212ENST00000531589 MEX3CQ5U5Q3 659 aaKnown RBP19.39■□□□□ 0.69
SF3B2-212ENST00000531589 NALCNQ8IZF0 1738 aa19.38■□□□□ 0.69
SF3B2-212ENST00000531589 POTEAQ6S8J7 498 aa19.37■□□□□ 0.69
SF3B2-212ENST00000531589 C1orf167Q5SNV9 1468 aa19.36■□□□□ 0.69
SF3B2-212ENST00000531589 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
SF3B2-212ENST00000531589 HRCP23327 699 aa19.35■□□□□ 0.69
SF3B2-212ENST00000531589 PIK3C2GO75747 1445 aa19.34■□□□□ 0.69
SF3B2-212ENST00000531589 LRPPRCP42704 1394 aaKnown RBP19.34■□□□□ 0.69
SF3B2-212ENST00000531589 ZNF772Q68DY9 489 aaPredicted RBP19.34■□□□□ 0.69
SF3B2-212ENST00000531589 STK26Q9P289 416 aa19.34■□□□□ 0.69
SF3B2-212ENST00000531589 ABCC11Q96J66 1382 aa19.33■□□□□ 0.69
SF3B2-212ENST00000531589 NHSL1Q5SYE7 1610 aa19.33■□□□□ 0.69
SF3B2-212ENST00000531589 TECPR2O15040 1411 aa19.33■□□□□ 0.68
SF3B2-212ENST00000531589 IFT172Q9UG01 1749 aa19.32■□□□□ 0.68
SF3B2-212ENST00000531589 NUTM2BA6NNL0 878 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-212ENST00000531589 NUTM2EB1AL46 878 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-212ENST00000531589 NUTM2AQ8IVF1 878 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-212ENST00000531589 LRP6O75581 1613 aa19.32■□□□□ 0.68
SF3B2-212ENST00000531589 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
SF3B2-212ENST00000531589 ORAI2Q96SN7 254 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms