RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 RIMS2Q9UQ26 1411 aa25.35■■□□□ 1.65
CTSB-222ENST00000531551 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
CTSB-222ENST00000531551 HDGFP51858 240 aaKnown RBP25.34■■□□□ 1.65
CTSB-222ENST00000531551 HSPA2P54652 639 aa25.34■■□□□ 1.65
CTSB-222ENST00000531551 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
CTSB-222ENST00000531551 EID1Q9Y6B2 187 aa25.33■■□□□ 1.65
CTSB-222ENST00000531551 TXNDC2Q86VQ3 553 aa25.32■■□□□ 1.64
CTSB-222ENST00000531551 KDM5AP29375 1690 aaKnown RBP25.32■■□□□ 1.64
CTSB-222ENST00000531551 VGFO15240 615 aaPredicted RBP25.32■■□□□ 1.64
CTSB-222ENST00000531551 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.32■■□□□ 1.64
CTSB-222ENST00000531551 NEXMIFQ5QGS0 1516 aa25.31■■□□□ 1.64
CTSB-222ENST00000531551 LMTK3Q96Q04 1460 aa25.3■■□□□ 1.64
CTSB-222ENST00000531551 ADGRF5Q8IZF2 1346 aa25.3■■□□□ 1.64
CTSB-222ENST00000531551 LTKP29376 864 aa25.3■■□□□ 1.64
CTSB-222ENST00000531551 BCANQ96GW7 911 aa25.29■■□□□ 1.64
CTSB-222ENST00000531551 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
CTSB-222ENST00000531551 ANKLE2Q86XL3 938 aa25.28■■□□□ 1.64
CTSB-222ENST00000531551 STAC3Q96MF2 364 aa25.27■■□□□ 1.64
CTSB-222ENST00000531551 SLIT1O75093 1534 aa25.27■■□□□ 1.64
CTSB-222ENST00000531551 ARHGAP23Q9P227 1491 aa25.26■■□□□ 1.63
CTSB-222ENST00000531551 PPLO60437 1756 aa25.24■■□□□ 1.63
CTSB-222ENST00000531551 NBPF8Q3BBV2 869 aa25.23■■□□□ 1.63
CTSB-222ENST00000531551 MYOM2P54296 1465 aa25.23■■□□□ 1.63
CTSB-222ENST00000531551 NCKAP5LQ9HCH0 1330 aa25.23■■□□□ 1.63
CTSB-222ENST00000531551 SCAF11Q99590 1463 aaKnown RBP25.22■■□□□ 1.63
CTSB-222ENST00000531551 IFT172Q9UG01 1749 aa25.22■■□□□ 1.63
CTSB-222ENST00000531551 PRAG1Q86YV5 1406 aa25.21■■□□□ 1.63
CTSB-222ENST00000531551 CFAP70Q5T0N1 1121 aa25.17■■□□□ 1.62
CTSB-222ENST00000531551 PLEKHG1Q9ULL1 1385 aa25.17■■□□□ 1.62
CTSB-222ENST00000531551 PIK3C2GO75747 1445 aa25.16■■□□□ 1.62
CTSB-222ENST00000531551 NRXN1Q9ULB1 1477 aa25.16■■□□□ 1.62
CTSB-222ENST00000531551 SLC26A8Q96RN1 970 aa25.15■■□□□ 1.62
CTSB-222ENST00000531551 C14orf93Q9H972 538 aaKnown RBP25.12■■□□□ 1.61
CTSB-222ENST00000531551 NPHP4O75161 1426 aaPredicted RBP25.12■■□□□ 1.61
CTSB-222ENST00000531551 NBPF1Q3BBV0 1214 aa25.11■■□□□ 1.61
CTSB-222ENST00000531551 ROCK2O75116 1388 aaKnown RBP25.1■■□□□ 1.61
CTSB-222ENST00000531551 TMEM132EQ6IEE7 984 aa25.09■■□□□ 1.61
CTSB-222ENST00000531551 POLR1AO95602 1720 aaPredicted RBP25.08■■□□□ 1.6
CTSB-222ENST00000531551 SETBP1Q9Y6X0 1596 aa25.07■■□□□ 1.6
CTSB-222ENST00000531551 ADAMTS13Q76LX8 1427 aa25.07■■□□□ 1.6
CTSB-222ENST00000531551 MED14O60244 1454 aa25.06■■□□□ 1.6
CTSB-222ENST00000531551 ALKQ9UM73 1620 aa25.06■■□□□ 1.6
CTSB-222ENST00000531551 CARD11Q9BXL7 1154 aa25.06■■□□□ 1.6
CTSB-222ENST00000531551 IQGAP1P46940 1657 aa25.05■■□□□ 1.6
CTSB-222ENST00000531551 RALGAPBQ86X10 1494 aa25.05■■□□□ 1.6
CTSB-222ENST00000531551 TBX22Q9Y458 520 aa25.04■■□□□ 1.6
CTSB-222ENST00000531551 NRXN3Q9Y4C0 1643 aa25.04■■□□□ 1.6
CTSB-222ENST00000531551 TRPM1Q7Z4N2 1603 aa25.03■■□□□ 1.6
CTSB-222ENST00000531551 METP08581 1390 aa25.03■■□□□ 1.6
CTSB-222ENST00000531551 STK26Q9P289 416 aa25.02■■□□□ 1.6
CTSB-222ENST00000531551 STRCQ7RTU9 1775 aa25.01■■□□□ 1.59
CTSB-222ENST00000531551 LAMC1P11047 1609 aa25■■□□□ 1.59
CTSB-222ENST00000531551 DMRT2Q9Y5R5 561 aa24.98■■□□□ 1.59
CTSB-222ENST00000531551 KIAA1210Q9ULL0 1709 aa24.98■■□□□ 1.59
CTSB-222ENST00000531551 TRAK1Q9UPV9 953 aa24.98■■□□□ 1.59
CTSB-222ENST00000531551 DIP2AQ14689 1571 aa24.96■■□□□ 1.59
CTSB-222ENST00000531551 ADGRB1O14514 1584 aa24.96■■□□□ 1.59
CTSB-222ENST00000531551 ASXL1Q8IXJ9 1541 aa24.96■■□□□ 1.59
CTSB-222ENST00000531551 GPRASP1Q5JY77 1395 aa24.96■■□□□ 1.59
CTSB-222ENST00000531551 AMOTL2Q9Y2J4 779 aa24.94■■□□□ 1.58
CTSB-222ENST00000531551 YTHDC2Q9H6S0 1430 aaKnown RBP24.94■■□□□ 1.58
CTSB-222ENST00000531551 SETD1AO15047 1707 aaKnown RBP24.93■■□□□ 1.58
CTSB-222ENST00000531551 LRPPRCP42704 1394 aaKnown RBP24.91■■□□□ 1.58
CTSB-222ENST00000531551 PTPRUQ92729 1446 aa24.91■■□□□ 1.58
CTSB-222ENST00000531551 PIK3R4Q99570 1358 aa24.91■■□□□ 1.58
CTSB-222ENST00000531551 EIF4G2P78344 907 aaKnown RBP eCLIP24.89■■□□□ 1.58
CTSB-222ENST00000531551 USP47Q96K76 1375 aa24.89■■□□□ 1.58
CTSB-222ENST00000531551 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.57
CTSB-222ENST00000531551 KCNA6P17658 529 aa24.87■■□□□ 1.57
CTSB-222ENST00000531551 ABCC11Q96J66 1382 aa24.87■■□□□ 1.57
CTSB-222ENST00000531551 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
CTSB-222ENST00000531551 SAFB2Q14151 953 aaKnown RBP eCLIP24.86■■□□□ 1.57
CTSB-222ENST00000531551 POGKQ9P215 609 aa24.86■■□□□ 1.57
CTSB-222ENST00000531551 PRAM1Q96QH2 718 aa24.85■■□□□ 1.57
CTSB-222ENST00000531551 EIF3AQ14152 1382 aaKnown RBP24.85■■□□□ 1.57
CTSB-222ENST00000531551 ST20-MTHFSA0A0A6YYL1 179 aa24.84■■□□□ 1.57
CTSB-222ENST00000531551 WAPLQ7Z5K2 1190 aa24.84■■□□□ 1.57
CTSB-222ENST00000531551 ZNF335Q9H4Z2 1342 aaPredicted RBP24.84■■□□□ 1.57
CTSB-222ENST00000531551 ROBO2Q9HCK4 1378 aa24.82■■□□□ 1.56
CTSB-222ENST00000531551 CENPJQ9HC77 1338 aaPredicted RBP24.81■■□□□ 1.56
CTSB-222ENST00000531551 RBM33Q96EV2 1170 aaKnown RBP24.81■■□□□ 1.56
CTSB-222ENST00000531551 TECPR2O15040 1411 aa24.8■■□□□ 1.56
CTSB-222ENST00000531551 PLEKHH1Q9ULM0 1364 aa24.79■■□□□ 1.56
CTSB-222ENST00000531551 PROSER2Q86WR7 435 aaPredicted RBP24.79■■□□□ 1.56
CTSB-222ENST00000531551 CHD2O14647 1828 aaKnown RBP24.78■■□□□ 1.56
CTSB-222ENST00000531551 SIRT1Q96EB6 747 aa24.77■■□□□ 1.56
CTSB-222ENST00000531551 DLC1Q96QB1 1528 aa24.77■■□□□ 1.56
CTSB-222ENST00000531551 XRN1Q8IZH2 1706 aaKnown RBP24.77■■□□□ 1.56
CTSB-222ENST00000531551 PTCH1Q13635 1447 aa24.76■■□□□ 1.55
CTSB-222ENST00000531551 CPS1P31327 1500 aa24.76■■□□□ 1.55
CTSB-222ENST00000531551 FAM135BQ49AJ0 1406 aa24.76■■□□□ 1.55
CTSB-222ENST00000531551 NWD1Q149M9 1564 aa24.75■■□□□ 1.55
CTSB-222ENST00000531551 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
CTSB-222ENST00000531551 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
CTSB-222ENST00000531551 MINK1Q8N4C8 1332 aaPredicted RBP24.75■■□□□ 1.55
CTSB-222ENST00000531551 C14orf37Q86TY3 774 aa24.74■■□□□ 1.55
CTSB-222ENST00000531551 NKTRP30414 1462 aaKnown RBP24.72■■□□□ 1.55
CTSB-222ENST00000531551 TESK2Q96S53 571 aa24.7■■□□□ 1.55
CTSB-222ENST00000531551 STRCP1A6NGW2 1772 aa24.7■■□□□ 1.54
CTSB-222ENST00000531551 TMEM94Q12767 1356 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms