RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 TMEM94Q12767 1356 aa20.36■□□□□ 0.85
AMBRA1-210ENST00000531542 TMEM131LA2VDJ0 1609 aa20.36■□□□□ 0.85
AMBRA1-210ENST00000531542 NKTRP30414 1462 aaKnown RBP20.36■□□□□ 0.85
AMBRA1-210ENST00000531542 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
AMBRA1-210ENST00000531542 FAM135BQ49AJ0 1406 aa20.35■□□□□ 0.85
AMBRA1-210ENST00000531542 TBX22Q9Y458 520 aa20.34■□□□□ 0.85
AMBRA1-210ENST00000531542 NWD1Q149M9 1564 aa20.34■□□□□ 0.85
AMBRA1-210ENST00000531542 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
AMBRA1-210ENST00000531542 RRBP1Q9P2E9 1410 aaKnown RBP20.33■□□□□ 0.84
AMBRA1-210ENST00000531542 E9PCH4 1651 aa20.32■□□□□ 0.84
AMBRA1-210ENST00000531542 ITGAEP38570 1179 aa20.32■□□□□ 0.84
AMBRA1-210ENST00000531542 XIRP1Q702N8 1843 aaKnown RBP20.32■□□□□ 0.84
AMBRA1-210ENST00000531542 MED1Q15648 1581 aaPredicted RBP20.31■□□□□ 0.84
AMBRA1-210ENST00000531542 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
AMBRA1-210ENST00000531542 BCANQ96GW7 911 aa20.3■□□□□ 0.84
AMBRA1-210ENST00000531542 NCOA3Q9Y6Q9 1424 aa20.29■□□□□ 0.84
AMBRA1-210ENST00000531542 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
AMBRA1-210ENST00000531542 PIK3R4Q99570 1358 aa20.28■□□□□ 0.84
AMBRA1-210ENST00000531542 CHGAP10645 457 aaKnown RBP20.26■□□□□ 0.83
AMBRA1-210ENST00000531542 ADAMTS13Q76LX8 1427 aa20.26■□□□□ 0.83
AMBRA1-210ENST00000531542 DIP2AQ14689 1571 aa20.25■□□□□ 0.83
AMBRA1-210ENST00000531542 MSH6P52701 1360 aa20.24■□□□□ 0.83
AMBRA1-210ENST00000531542 MYO5BQ9ULV0 1848 aa20.23■□□□□ 0.83
AMBRA1-210ENST00000531542 NAIPQ13075 1403 aa20.22■□□□□ 0.83
AMBRA1-210ENST00000531542 CHD2O14647 1828 aaKnown RBP20.22■□□□□ 0.83
AMBRA1-210ENST00000531542 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
AMBRA1-210ENST00000531542 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
AMBRA1-210ENST00000531542 NUTM2DQ5VT03 806 aaPredicted RBP20.18■□□□□ 0.82
AMBRA1-210ENST00000531542 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
AMBRA1-210ENST00000531542 HFM1A2PYH4 1435 aa20.18■□□□□ 0.82
AMBRA1-210ENST00000531542 C19orf44Q9H6X5 657 aa20.17■□□□□ 0.82
AMBRA1-210ENST00000531542 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
AMBRA1-210ENST00000531542 TRPM2O94759 1503 aa20.16■□□□□ 0.82
AMBRA1-210ENST00000531542 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
AMBRA1-210ENST00000531542 SPHKAPQ2M3C7 1700 aa20.15■□□□□ 0.82
AMBRA1-210ENST00000531542 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
AMBRA1-210ENST00000531542 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.81
AMBRA1-210ENST00000531542 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
AMBRA1-210ENST00000531542 PTPRUQ92729 1446 aa20.12■□□□□ 0.81
AMBRA1-210ENST00000531542 ZNF326Q5BKZ1 582 aaKnown RBP20.11■□□□□ 0.81
AMBRA1-210ENST00000531542 RGS17Q9UGC6 210 aaPredicted RBP20.1■□□□□ 0.81
AMBRA1-210ENST00000531542 DCCP43146 1447 aa20.1■□□□□ 0.81
AMBRA1-210ENST00000531542 ATF3P18847 181 aa20.09■□□□□ 0.81
AMBRA1-210ENST00000531542 C14orf37Q86TY3 774 aa20.09■□□□□ 0.81
AMBRA1-210ENST00000531542 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
AMBRA1-210ENST00000531542 CLTCL1P53675 1640 aa20.08■□□□□ 0.8
AMBRA1-210ENST00000531542 JCADQ9P266 1359 aa20.08■□□□□ 0.8
AMBRA1-210ENST00000531542 METP08581 1390 aa20.07■□□□□ 0.8
AMBRA1-210ENST00000531542 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
AMBRA1-210ENST00000531542 RPGRIP1LQ68CZ1 1315 aa20.06■□□□□ 0.8
AMBRA1-210ENST00000531542 TRIM52Q96A61 297 aa20.06■□□□□ 0.8
AMBRA1-210ENST00000531542 XRN1Q8IZH2 1706 aaKnown RBP20.05■□□□□ 0.8
AMBRA1-210ENST00000531542 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
AMBRA1-210ENST00000531542 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
AMBRA1-210ENST00000531542 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.04■□□□□ 0.8
AMBRA1-210ENST00000531542 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.79
AMBRA1-210ENST00000531542 PHLPP1O60346 1717 aa20.01■□□□□ 0.79
AMBRA1-210ENST00000531542 AHDC1Q5TGY3 1603 aaPredicted RBP20.01■□□□□ 0.79
AMBRA1-210ENST00000531542 SPATA31A6Q5VVP1 1343 aa20.01■□□□□ 0.79
AMBRA1-210ENST00000531542 BRINP3Q76B58 766 aa20■□□□□ 0.79
AMBRA1-210ENST00000531542 COL16A1Q07092 1604 aaPredicted RBP20■□□□□ 0.79
AMBRA1-210ENST00000531542 PRAG1Q86YV5 1406 aa20■□□□□ 0.79
AMBRA1-210ENST00000531542 KIF1BO60333 1816 aa19.99■□□□□ 0.79
AMBRA1-210ENST00000531542 ADGRL3Q9HAR2 1447 aa19.98■□□□□ 0.79
AMBRA1-210ENST00000531542 MST1RQ04912 1400 aa19.97■□□□□ 0.79
AMBRA1-210ENST00000531542 PTCH1Q13635 1447 aa19.96■□□□□ 0.79
AMBRA1-210ENST00000531542 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
AMBRA1-210ENST00000531542 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
AMBRA1-210ENST00000531542 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
AMBRA1-210ENST00000531542 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
AMBRA1-210ENST00000531542 CCDC144AA2RUR9 1427 aa19.91■□□□□ 0.78
AMBRA1-210ENST00000531542 SPATA31E1Q6ZUB1 1445 aa19.9■□□□□ 0.78
AMBRA1-210ENST00000531542 SETD1AO15047 1707 aaKnown RBP19.89■□□□□ 0.77
AMBRA1-210ENST00000531542 SHPRHQ149N8 1683 aa19.89■□□□□ 0.77
AMBRA1-210ENST00000531542 FOXD1Q16676 465 aa19.89■□□□□ 0.77
AMBRA1-210ENST00000531542 LRRC59Q96AG4 307 aaKnown RBP19.89■□□□□ 0.77
AMBRA1-210ENST00000531542 ANKRD30BQ9BXX2 1392 aa19.89■□□□□ 0.77
AMBRA1-210ENST00000531542 ROBO2Q9HCK4 1378 aa19.89■□□□□ 0.77
AMBRA1-210ENST00000531542 LRP6O75581 1613 aa19.88■□□□□ 0.77
AMBRA1-210ENST00000531542 PPLO60437 1756 aa19.87■□□□□ 0.77
AMBRA1-210ENST00000531542 ZNF772Q68DY9 489 aaPredicted RBP19.86■□□□□ 0.77
AMBRA1-210ENST00000531542 C1orf167Q5SNV9 1468 aa19.86■□□□□ 0.77
AMBRA1-210ENST00000531542 NALCNQ8IZF0 1738 aa19.85■□□□□ 0.77
AMBRA1-210ENST00000531542 NHSL1Q5SYE7 1610 aa19.84■□□□□ 0.77
AMBRA1-210ENST00000531542 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
AMBRA1-210ENST00000531542 MEX3CQ5U5Q3 659 aaKnown RBP19.83■□□□□ 0.77
AMBRA1-210ENST00000531542 LAMC1P11047 1609 aa19.82■□□□□ 0.76
AMBRA1-210ENST00000531542 TECPR2O15040 1411 aa19.82■□□□□ 0.76
AMBRA1-210ENST00000531542 RGL3Q3MIN7 710 aa19.81■□□□□ 0.76
AMBRA1-210ENST00000531542 ABCC11Q96J66 1382 aa19.81■□□□□ 0.76
AMBRA1-210ENST00000531542 SOS2Q07890 1332 aaPredicted RBP19.8■□□□□ 0.76
AMBRA1-210ENST00000531542 LRPPRCP42704 1394 aaKnown RBP19.8■□□□□ 0.76
AMBRA1-210ENST00000531542 PNPLA6Q8IY17 1366 aa19.8■□□□□ 0.76
AMBRA1-210ENST00000531542 PIK3C2GO75747 1445 aa19.79■□□□□ 0.76
AMBRA1-210ENST00000531542 SIRT1Q96EB6 747 aa19.78■□□□□ 0.76
AMBRA1-210ENST00000531542 DDX17Q92841 729 aaKnown RBP19.77■□□□□ 0.76
AMBRA1-210ENST00000531542 ORAI2Q96SN7 254 aa19.77■□□□□ 0.76
AMBRA1-210ENST00000531542 CDC42BPGQ6DT37 1551 aa19.76■□□□□ 0.75
AMBRA1-210ENST00000531542 NUTM2BA6NNL0 878 aaPredicted RBP19.76■□□□□ 0.75
AMBRA1-210ENST00000531542 NUTM2EB1AL46 878 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms