RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 ANKRD30AQ9BXX3 1397 aa31.17■■■□□ 2.58
HIPK3-205ENST00000531504 SLC52A1Q9NWF4 448 aa31.15■■■□□ 2.58
HIPK3-205ENST00000531504 CHD2O14647 1828 aaKnown RBP31.13■■■□□ 2.57
HIPK3-205ENST00000531504 COL16A1Q07092 1604 aaPredicted RBP31.13■■■□□ 2.57
HIPK3-205ENST00000531504 RPRD2Q5VT52 1461 aaKnown RBP31.08■■■□□ 2.57
HIPK3-205ENST00000531504 PLEKHG1Q9ULL1 1385 aa31.08■■■□□ 2.57
HIPK3-205ENST00000531504 FGD6Q6ZV73 1430 aa31.07■■■□□ 2.57
HIPK3-205ENST00000531504 SPATA31A6Q5VVP1 1343 aa31.06■■■□□ 2.56
HIPK3-205ENST00000531504 HDGFP51858 240 aaKnown RBP31.06■■■□□ 2.56
HIPK3-205ENST00000531504 ZFYVE9O95405 1425 aa31.06■■■□□ 2.56
HIPK3-205ENST00000531504 NCOA3Q9Y6Q9 1424 aa31.06■■■□□ 2.56
HIPK3-205ENST00000531504 MYO5BQ9ULV0 1848 aa31.05■■■□□ 2.56
HIPK3-205ENST00000531504 PPP1R15AO75807 674 aaPredicted RBP31.05■■■□□ 2.56
HIPK3-205ENST00000531504 GCC2Q8IWJ2 1684 aa31.04■■■□□ 2.56
HIPK3-205ENST00000531504 CHIC2Q9UKJ5 165 aa31.04■■■□□ 2.56
HIPK3-205ENST00000531504 APLP2Q06481 763 aa31.03■■■□□ 2.56
HIPK3-205ENST00000531504 MEX3CQ5U5Q3 659 aaKnown RBP31.03■■■□□ 2.56
HIPK3-205ENST00000531504 ZNF772Q68DY9 489 aaPredicted RBP31.03■■■□□ 2.56
HIPK3-205ENST00000531504 RIMS2Q9UQ26 1411 aa31.01■■■□□ 2.55
HIPK3-205ENST00000531504 LRP6O75581 1613 aa31.01■■■□□ 2.55
HIPK3-205ENST00000531504 SHPRHQ149N8 1683 aa31■■■□□ 2.55
HIPK3-205ENST00000531504 C14orf37Q86TY3 774 aa31■■■□□ 2.55
HIPK3-205ENST00000531504 AHDC1Q5TGY3 1603 aaPredicted RBP30.99■■■□□ 2.55
HIPK3-205ENST00000531504 TMEM131LA2VDJ0 1609 aa30.98■■■□□ 2.55
HIPK3-205ENST00000531504 ADGRL2O95490 1459 aa30.97■■■□□ 2.55
HIPK3-205ENST00000531504 TBX22Q9Y458 520 aa30.97■■■□□ 2.55
HIPK3-205ENST00000531504 CADPS2Q86UW7 1296 aa30.96■■■□□ 2.55
HIPK3-205ENST00000531504 DIP2AQ14689 1571 aa30.96■■■□□ 2.55
HIPK3-205ENST00000531504 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.95■■■□□ 2.55
HIPK3-205ENST00000531504 UPF1Q92900 1129 aaKnown RBP eCLIP30.95■■■□□ 2.55
HIPK3-205ENST00000531504 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.94■■■□□ 2.54
HIPK3-205ENST00000531504 TRIM52Q96A61 297 aa30.93■■■□□ 2.54
HIPK3-205ENST00000531504 LOC105371045A0A1W2PR82 267 aa30.92■■■□□ 2.54
HIPK3-205ENST00000531504 ATF3P18847 181 aa30.92■■■□□ 2.54
HIPK3-205ENST00000531504 C19orf44Q9H6X5 657 aa30.91■■■□□ 2.54
HIPK3-205ENST00000531504 PIK3R4Q99570 1358 aa30.91■■■□□ 2.54
HIPK3-205ENST00000531504 ANKRD50Q9ULJ7 1429 aa30.9■■■□□ 2.54
HIPK3-205ENST00000531504 RXRBP28702 533 aa30.86■■■□□ 2.53
HIPK3-205ENST00000531504 ADAMTS13Q76LX8 1427 aa30.86■■■□□ 2.53
HIPK3-205ENST00000531504 CDK12Q9NYV4 1490 aaPredicted RBP30.86■■■□□ 2.53
HIPK3-205ENST00000531504 TRPM2O94759 1503 aa30.84■■■□□ 2.53
HIPK3-205ENST00000531504 CHGAP10645 457 aaKnown RBP30.84■■■□□ 2.53
HIPK3-205ENST00000531504 UNC13BO14795 1591 aa30.81■■■□□ 2.52
HIPK3-205ENST00000531504 DCCP43146 1447 aa30.8■■■□□ 2.52
HIPK3-205ENST00000531504 E9PCH4 1651 aa30.78■■■□□ 2.52
HIPK3-205ENST00000531504 BRINP3Q76B58 766 aa30.78■■■□□ 2.52
HIPK3-205ENST00000531504 NUTM2BA6NNL0 878 aaPredicted RBP30.77■■■□□ 2.52
HIPK3-205ENST00000531504 NUTM2EB1AL46 878 aaPredicted RBP30.77■■■□□ 2.52
HIPK3-205ENST00000531504 NUTM2AQ8IVF1 878 aaPredicted RBP30.77■■■□□ 2.52
HIPK3-205ENST00000531504 FAM50AQ14320 339 aaKnown RBP30.76■■■□□ 2.51
HIPK3-205ENST00000531504 NUTM2DQ5VT03 806 aaPredicted RBP30.76■■■□□ 2.51
HIPK3-205ENST00000531504 ASXL1Q8IXJ9 1541 aa30.75■■■□□ 2.51
HIPK3-205ENST00000531504 AMOTL2Q9Y2J4 779 aa30.74■■■□□ 2.51
HIPK3-205ENST00000531504 NHSL1Q5SYE7 1610 aa30.73■■■□□ 2.51
HIPK3-205ENST00000531504 SETD5Q9C0A6 1442 aa30.73■■■□□ 2.51
HIPK3-205ENST00000531504 AFF2P51816 1311 aa30.73■■■□□ 2.51
HIPK3-205ENST00000531504 IQGAP3Q86VI3 1631 aa30.69■■■□□ 2.5
HIPK3-205ENST00000531504 PTPRUQ92729 1446 aa30.69■■■□□ 2.5
HIPK3-205ENST00000531504 XRN1Q8IZH2 1706 aaKnown RBP30.69■■■□□ 2.5
HIPK3-205ENST00000531504 MST1RQ04912 1400 aa30.65■■■□□ 2.5
HIPK3-205ENST00000531504 LRRC59Q96AG4 307 aaKnown RBP30.65■■■□□ 2.5
HIPK3-205ENST00000531504 SETBP1Q9Y6X0 1596 aa30.63■■■□□ 2.49
HIPK3-205ENST00000531504 RGS12O14924 1447 aa30.63■■■□□ 2.49
HIPK3-205ENST00000531504 NRXN3Q9Y4C0 1643 aa30.62■■■□□ 2.49
HIPK3-205ENST00000531504 RBM6P78332 1123 aaKnown RBP30.61■■■□□ 2.49
HIPK3-205ENST00000531504 C8orf37Q96NL8 207 aa30.6■■■□□ 2.49
HIPK3-205ENST00000531504 QTRT2Q9H974 415 aaKnown RBP30.58■■■□□ 2.49
HIPK3-205ENST00000531504 ADGRL3Q9HAR2 1447 aa30.56■■■□□ 2.48
HIPK3-205ENST00000531504 ROCK1Q13464 1354 aa30.56■■■□□ 2.48
HIPK3-205ENST00000531504 PNPLA6Q8IY17 1366 aa30.56■■■□□ 2.48
HIPK3-205ENST00000531504 NUP155O75694 1391 aa30.54■■■□□ 2.48
HIPK3-205ENST00000531504 SPHKAPQ2M3C7 1700 aa30.53■■■□□ 2.48
HIPK3-205ENST00000531504 NALCNQ8IZF0 1738 aa30.53■■■□□ 2.48
HIPK3-205ENST00000531504 NGLY1Q96IV0 654 aa30.52■■■□□ 2.48
HIPK3-205ENST00000531504 ZNF326Q5BKZ1 582 aaKnown RBP30.49■■■□□ 2.47
HIPK3-205ENST00000531504 METP08581 1390 aa30.49■■■□□ 2.47
HIPK3-205ENST00000531504 ATAD2Q6PL18 1390 aa30.49■■■□□ 2.47
HIPK3-205ENST00000531504 DDX17Q92841 729 aaKnown RBP30.47■■■□□ 2.47
HIPK3-205ENST00000531504 FOXD1Q16676 465 aa30.46■■■□□ 2.47
HIPK3-205ENST00000531504 LAMC1P11047 1609 aa30.46■■■□□ 2.47
HIPK3-205ENST00000531504 ADAMTS2O95450 1211 aa30.45■■■□□ 2.47
HIPK3-205ENST00000531504 C1orf167Q5SNV9 1468 aa30.42■■■□□ 2.46
HIPK3-205ENST00000531504 NEXMIFQ5QGS0 1516 aa30.39■■■□□ 2.46
HIPK3-205ENST00000531504 SRCAPQ6ZRS2 3230 aa30.39■■■□□ 2.45
HIPK3-205ENST00000531504 USP21Q9UK80 565 aa30.38■■■□□ 2.45
HIPK3-205ENST00000531504 TRPC5Q9UL62 973 aaPredicted RBP30.38■■■□□ 2.45
HIPK3-205ENST00000531504 PTCH1Q13635 1447 aa30.38■■■□□ 2.45
HIPK3-205ENST00000531504 SOS2Q07890 1332 aaPredicted RBP30.35■■■□□ 2.45
HIPK3-205ENST00000531504 ZRANB1Q9UGI0 708 aa30.34■■■□□ 2.45
HIPK3-205ENST00000531504 KIF1BO60333 1816 aa30.33■■■□□ 2.45
HIPK3-205ENST00000531504 CLTCL1P53675 1640 aa30.33■■■□□ 2.45
HIPK3-205ENST00000531504 COL22A1Q8NFW1 1626 aaPredicted RBP30.33■■■□□ 2.45
HIPK3-205ENST00000531504 FNBP4Q8N3X1 1017 aaPredicted RBP30.31■■■□□ 2.44
HIPK3-205ENST00000531504 ATRNO75882 1429 aa30.3■■■□□ 2.44
HIPK3-205ENST00000531504 ORAI2Q96SN7 254 aa30.28■■■□□ 2.44
HIPK3-205ENST00000531504 ITGAEP38570 1179 aa30.27■■■□□ 2.44
HIPK3-205ENST00000531504 CCDC125Q86Z20 511 aa30.26■■■□□ 2.43
HIPK3-205ENST00000531504 PRAG1Q86YV5 1406 aa30.25■■■□□ 2.43
HIPK3-205ENST00000531504 ROBO2Q9HCK4 1378 aa30.25■■■□□ 2.43
HIPK3-205ENST00000531504 MARF1Q9Y4F3 1742 aaKnown RBP30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms