RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 SETBP1Q9Y6X0 1596 aa10.41□□□□□ -0.74
PACS1-211ENST00000531298 SPINK5Q9NQ38 1064 aaPredicted RBP10.41□□□□□ -0.74
PACS1-211ENST00000531298 ABCC3O15438 1527 aa10.41□□□□□ -0.74
PACS1-211ENST00000531298 ADGRB3O60242 1522 aa10.41□□□□□ -0.74
PACS1-211ENST00000531298 COL17A1Q9UMD9 1497 aaPredicted RBP10.41□□□□□ -0.74
PACS1-211ENST00000531298 NOS1P29475 1434 aa10.41□□□□□ -0.74
PACS1-211ENST00000531298 PIK3C2BO00750 1634 aa10.4□□□□□ -0.74
PACS1-211ENST00000531298 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
PACS1-211ENST00000531298 CAMSAP1Q5T5Y3 1602 aa10.4□□□□□ -0.75
PACS1-211ENST00000531298 INSRP06213 1382 aa10.39□□□□□ -0.75
PACS1-211ENST00000531298 SCAF11Q99590 1463 aaKnown RBP10.39□□□□□ -0.75
PACS1-211ENST00000531298 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
PACS1-211ENST00000531298 CDCA8Q53HL2 280 aa10.39□□□□□ -0.75
PACS1-211ENST00000531298 HIRIP3Q9BW71 556 aaPredicted RBP10.39□□□□□ -0.75
PACS1-211ENST00000531298 EIF3AQ14152 1382 aaKnown RBP10.39□□□□□ -0.75
PACS1-211ENST00000531298 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
PACS1-211ENST00000531298 ZFYVE9O95405 1425 aa10.38□□□□□ -0.75
PACS1-211ENST00000531298 NPATQ14207 1427 aa10.38□□□□□ -0.75
PACS1-211ENST00000531298 MYO3AQ8NEV4 1616 aa10.37□□□□□ -0.75
PACS1-211ENST00000531298 GTF3C3Q9Y5Q9 886 aa10.37□□□□□ -0.75
PACS1-211ENST00000531298 ST20-MTHFSA0A0A6YYL1 179 aa10.36□□□□□ -0.75
PACS1-211ENST00000531298 RALBP1Q15311 655 aa10.36□□□□□ -0.75
PACS1-211ENST00000531298 PPLO60437 1756 aa10.36□□□□□ -0.75
PACS1-211ENST00000531298 YTHDC1Q96MU7 727 aaKnown RBP10.35□□□□□ -0.75
PACS1-211ENST00000531298 TESK2Q96S53 571 aa10.35□□□□□ -0.75
PACS1-211ENST00000531298 NPC1L1Q9UHC9 1359 aa10.35□□□□□ -0.75
PACS1-211ENST00000531298 SYNMO15061 1565 aa10.35□□□□□ -0.75
PACS1-211ENST00000531298 TMF1P82094 1093 aa10.34□□□□□ -0.75
PACS1-211ENST00000531298 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
PACS1-211ENST00000531298 SLC52A1Q9NWF4 448 aa10.34□□□□□ -0.75
PACS1-211ENST00000531298 KDM2AQ9Y2K7 1162 aa10.34□□□□□ -0.75
PACS1-211ENST00000531298 DSG3P32926 999 aa10.33□□□□□ -0.76
PACS1-211ENST00000531298 ZNF326Q5BKZ1 582 aaKnown RBP10.33□□□□□ -0.76
PACS1-211ENST00000531298 CYB5RLQ6IPT4 315 aa10.33□□□□□ -0.76
PACS1-211ENST00000531298 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
PACS1-211ENST00000531298 BRD4O60885 1362 aaPredicted RBP10.33□□□□□ -0.76
PACS1-211ENST00000531298 RGL3Q3MIN7 710 aa10.32□□□□□ -0.76
PACS1-211ENST00000531298 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
PACS1-211ENST00000531298 KIF13AQ9H1H9 1805 aa10.31□□□□□ -0.76
PACS1-211ENST00000531298 NBPF1Q3BBV0 1214 aa10.31□□□□□ -0.76
PACS1-211ENST00000531298 SAMD1Q6SPF0 538 aaPredicted RBP10.31□□□□□ -0.76
PACS1-211ENST00000531298 MROH2AA6NES4 1674 aa10.31□□□□□ -0.76
PACS1-211ENST00000531298 PARD3Q8TEW0 1356 aa10.3□□□□□ -0.76
PACS1-211ENST00000531298 ARHGEF40Q8TER5 1519 aa10.3□□□□□ -0.76
PACS1-211ENST00000531298 PREX1Q8TCU6 1659 aa10.3□□□□□ -0.76
PACS1-211ENST00000531298 UGGT1Q9NYU2 1555 aa10.3□□□□□ -0.76
PACS1-211ENST00000531298 KDM5AP29375 1690 aaKnown RBP10.29□□□□□ -0.76
PACS1-211ENST00000531298 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
PACS1-211ENST00000531298 FAM69CQ0P6D2 419 aa10.29□□□□□ -0.76
PACS1-211ENST00000531298 ERICH6BQ5W0A0 696 aa10.29□□□□□ -0.76
PACS1-211ENST00000531298 SIGLEC1Q9BZZ2 1709 aa10.29□□□□□ -0.76
PACS1-211ENST00000531298 ZBED9Q6R2W3 1325 aa10.29□□□□□ -0.76
PACS1-211ENST00000531298 MYBBP1AQ9BQG0 1328 aaKnown RBP10.29□□□□□ -0.76
PACS1-211ENST00000531298 YEATS2Q9ULM3 1422 aa10.28□□□□□ -0.76
PACS1-211ENST00000531298 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
PACS1-211ENST00000531298 RAPGEF3O95398 923 aa10.28□□□□□ -0.76
PACS1-211ENST00000531298 C14orf93Q9H972 538 aaKnown RBP10.28□□□□□ -0.76
PACS1-211ENST00000531298 NEXMIFQ5QGS0 1516 aa10.28□□□□□ -0.76
PACS1-211ENST00000531298 LRPPRCP42704 1394 aaKnown RBP10.27□□□□□ -0.76
PACS1-211ENST00000531298 ADGRB1O14514 1584 aa10.27□□□□□ -0.76
PACS1-211ENST00000531298 SPATA31D1Q6ZQQ2 1576 aa10.27□□□□□ -0.76
PACS1-211ENST00000531298 TMEM131LA2VDJ0 1609 aa10.26□□□□□ -0.77
PACS1-211ENST00000531298 CAPN15O75808 1086 aa10.26□□□□□ -0.77
PACS1-211ENST00000531298 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
PACS1-211ENST00000531298 MRS2Q9HD23 443 aa10.26□□□□□ -0.77
PACS1-211ENST00000531298 GGT6Q6P531 493 aa10.25□□□□□ -0.77
PACS1-211ENST00000531298 ATF5Q9Y2D1 282 aaPredicted RBP10.25□□□□□ -0.77
PACS1-211ENST00000531298 DISP3Q9P2K9 1392 aa10.25□□□□□ -0.77
PACS1-211ENST00000531298 ERVK-7P63135 1459 aa10.24□□□□□ -0.77
PACS1-211ENST00000531298 MYOM1P52179 1685 aa10.24□□□□□ -0.77
PACS1-211ENST00000531298 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
PACS1-211ENST00000531298 PNISRQ8TF01 805 aaKnown RBP10.23□□□□□ -0.77
PACS1-211ENST00000531298 ADGRF5Q8IZF2 1346 aa10.23□□□□□ -0.77
PACS1-211ENST00000531298 NINLQ9Y2I6 1382 aa10.23□□□□□ -0.77
PACS1-211ENST00000531298 USP32Q8NFA0 1604 aa10.22□□□□□ -0.77
PACS1-211ENST00000531298 TSPOAP1O95153 1857 aa10.22□□□□□ -0.77
PACS1-211ENST00000531298 ASXL1Q8IXJ9 1541 aa10.22□□□□□ -0.77
PACS1-211ENST00000531298 CFAP65Q6ZU64 1925 aaKnown RBP10.21□□□□□ -0.77
PACS1-211ENST00000531298 HNRNPUQ00839 825 aaKnown RBP eCLIP10.21□□□□□ -0.77
PACS1-211ENST00000531298 TMC1Q8TDI8 760 aa10.2□□□□□ -0.78
PACS1-211ENST00000531298 DLC1Q96QB1 1528 aa10.2□□□□□ -0.78
PACS1-211ENST00000531298 CENPJQ9HC77 1338 aaPredicted RBP10.2□□□□□ -0.78
PACS1-211ENST00000531298 ARHGEF28Q8N1W1 1705 aaKnown RBP10.19□□□□□ -0.78
PACS1-211ENST00000531298 NEFLP07196 543 aa10.19□□□□□ -0.78
PACS1-211ENST00000531298 PDE3BQ13370 1112 aa10.19□□□□□ -0.78
PACS1-211ENST00000531298 IDI1Q13907 227 aa10.19□□□□□ -0.78
PACS1-211ENST00000531298 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
PACS1-211ENST00000531298 NGEFQ8N5V2 710 aa10.19□□□□□ -0.78
PACS1-211ENST00000531298 SUPT16HQ9Y5B9 1047 aaKnown RBP10.19□□□□□ -0.78
PACS1-211ENST00000531298 QRICH2Q9H0J4 1663 aa10.18□□□□□ -0.78
PACS1-211ENST00000531298 SMG6Q86US8 1419 aaKnown RBP10.18□□□□□ -0.78
PACS1-211ENST00000531298 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
PACS1-211ENST00000531298 PANK3Q9H999 370 aa10.18□□□□□ -0.78
PACS1-211ENST00000531298 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
PACS1-211ENST00000531298 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
PACS1-211ENST00000531298 NSD2O96028 1365 aa10.17□□□□□ -0.78
PACS1-211ENST00000531298 CCDC184Q52MB2 194 aa10.17□□□□□ -0.78
PACS1-211ENST00000531298 AMER1Q5JTC6 1135 aaPredicted RBP10.17□□□□□ -0.78
PACS1-211ENST00000531298 KNSTRNQ9Y448 316 aa10.17□□□□□ -0.78
PACS1-211ENST00000531298 MYO5BQ9ULV0 1848 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms