RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 RIMS2Q9UQ26 1411 aa16.56■□□□□ 0.24
FGFR1-236ENST00000531196 RRBP1Q9P2E9 1410 aaKnown RBP16.55■□□□□ 0.24
FGFR1-236ENST00000531196 KCNA6P17658 529 aa16.54■□□□□ 0.24
FGFR1-236ENST00000531196 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
FGFR1-236ENST00000531196 ZFYVE9O95405 1425 aa16.53■□□□□ 0.24
FGFR1-236ENST00000531196 TMEM94Q12767 1356 aa16.53■□□□□ 0.24
FGFR1-236ENST00000531196 TMEM131LA2VDJ0 1609 aa16.53■□□□□ 0.24
FGFR1-236ENST00000531196 PLEKHG1Q9ULL1 1385 aa16.52■□□□□ 0.24
FGFR1-236ENST00000531196 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
FGFR1-236ENST00000531196 MYO5BQ9ULV0 1848 aa16.52■□□□□ 0.23
FGFR1-236ENST00000531196 NKTRP30414 1462 aaKnown RBP16.51■□□□□ 0.23
FGFR1-236ENST00000531196 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
FGFR1-236ENST00000531196 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
FGFR1-236ENST00000531196 ILDR2Q71H61 639 aa16.5■□□□□ 0.23
FGFR1-236ENST00000531196 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
FGFR1-236ENST00000531196 RBM33Q96EV2 1170 aaKnown RBP16.48■□□□□ 0.23
FGFR1-236ENST00000531196 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
FGFR1-236ENST00000531196 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
FGFR1-236ENST00000531196 NAIPQ13075 1403 aa16.47■□□□□ 0.23
FGFR1-236ENST00000531196 SPHKAPQ2M3C7 1700 aa16.46■□□□□ 0.23
FGFR1-236ENST00000531196 MSH6P52701 1360 aa16.46■□□□□ 0.23
FGFR1-236ENST00000531196 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
FGFR1-236ENST00000531196 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
FGFR1-236ENST00000531196 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
FGFR1-236ENST00000531196 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
FGFR1-236ENST00000531196 TBX22Q9Y458 520 aa16.44■□□□□ 0.22
FGFR1-236ENST00000531196 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
FGFR1-236ENST00000531196 DIP2AQ14689 1571 aa16.43■□□□□ 0.22
FGFR1-236ENST00000531196 ADAMTS13Q76LX8 1427 aa16.42■□□□□ 0.22
FGFR1-236ENST00000531196 TRPM2O94759 1503 aa16.41■□□□□ 0.22
FGFR1-236ENST00000531196 SOCS7O14512 581 aa16.41■□□□□ 0.22
FGFR1-236ENST00000531196 FAM135BQ49AJ0 1406 aa16.4■□□□□ 0.22
FGFR1-236ENST00000531196 CHD2O14647 1828 aaKnown RBP16.4■□□□□ 0.22
FGFR1-236ENST00000531196 PIK3R4Q99570 1358 aa16.39■□□□□ 0.21
FGFR1-236ENST00000531196 CLTCL1P53675 1640 aa16.38■□□□□ 0.21
FGFR1-236ENST00000531196 ROBO1Q9Y6N7 1651 aa16.38■□□□□ 0.21
FGFR1-236ENST00000531196 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
FGFR1-236ENST00000531196 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
FGFR1-236ENST00000531196 AMOTL2Q9Y2J4 779 aa16.35■□□□□ 0.21
FGFR1-236ENST00000531196 NCOA3Q9Y6Q9 1424 aa16.35■□□□□ 0.21
FGFR1-236ENST00000531196 SETBP1Q9Y6X0 1596 aa16.34■□□□□ 0.21
FGFR1-236ENST00000531196 ATF3P18847 181 aa16.33■□□□□ 0.2
FGFR1-236ENST00000531196 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
FGFR1-236ENST00000531196 NRXN3Q9Y4C0 1643 aa16.33■□□□□ 0.2
FGFR1-236ENST00000531196 KIF1BO60333 1816 aa16.33■□□□□ 0.2
FGFR1-236ENST00000531196 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
FGFR1-236ENST00000531196 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
FGFR1-236ENST00000531196 C19orf44Q9H6X5 657 aa16.31■□□□□ 0.2
FGFR1-236ENST00000531196 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
FGFR1-236ENST00000531196 PHLPP1O60346 1717 aa16.28■□□□□ 0.2
FGFR1-236ENST00000531196 METP08581 1390 aa16.28■□□□□ 0.2
FGFR1-236ENST00000531196 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
FGFR1-236ENST00000531196 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.2
FGFR1-236ENST00000531196 FOXD1Q16676 465 aa16.27■□□□□ 0.2
FGFR1-236ENST00000531196 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.19
FGFR1-236ENST00000531196 DCCP43146 1447 aa16.26■□□□□ 0.19
FGFR1-236ENST00000531196 JCADQ9P266 1359 aa16.26■□□□□ 0.19
FGFR1-236ENST00000531196 RPGRIP1LQ68CZ1 1315 aa16.25■□□□□ 0.19
FGFR1-236ENST00000531196 MPHOSPH9Q99550 1183 aa16.23■□□□□ 0.19
FGFR1-236ENST00000531196 ADGRL3Q9HAR2 1447 aa16.22■□□□□ 0.19
FGFR1-236ENST00000531196 COL16A1Q07092 1604 aaPredicted RBP16.22■□□□□ 0.19
FGFR1-236ENST00000531196 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
FGFR1-236ENST00000531196 ACIN1Q9UKV3 1341 aaKnown RBP16.2■□□□□ 0.18
FGFR1-236ENST00000531196 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
FGFR1-236ENST00000531196 BRINP3Q76B58 766 aa16.2■□□□□ 0.18
FGFR1-236ENST00000531196 PPLO60437 1756 aa16.2■□□□□ 0.18
FGFR1-236ENST00000531196 MST1RQ04912 1400 aa16.19■□□□□ 0.18
FGFR1-236ENST00000531196 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
FGFR1-236ENST00000531196 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
FGFR1-236ENST00000531196 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
FGFR1-236ENST00000531196 MEX3CQ5U5Q3 659 aaKnown RBP16.18■□□□□ 0.18
FGFR1-236ENST00000531196 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
FGFR1-236ENST00000531196 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
FGFR1-236ENST00000531196 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
FGFR1-236ENST00000531196 SETD1AO15047 1707 aaKnown RBP16.16■□□□□ 0.18
FGFR1-236ENST00000531196 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
FGFR1-236ENST00000531196 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
FGFR1-236ENST00000531196 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
FGFR1-236ENST00000531196 ADGRF5Q8IZF2 1346 aa16.15■□□□□ 0.18
FGFR1-236ENST00000531196 RAB3GAP2Q9H2M9 1393 aa16.14■□□□□ 0.17
FGFR1-236ENST00000531196 PRAG1Q86YV5 1406 aa16.13■□□□□ 0.17
FGFR1-236ENST00000531196 SHPRHQ149N8 1683 aa16.13■□□□□ 0.17
FGFR1-236ENST00000531196 LRP6O75581 1613 aa16.12■□□□□ 0.17
FGFR1-236ENST00000531196 NUTM2BA6NNL0 878 aaPredicted RBP16.12■□□□□ 0.17
FGFR1-236ENST00000531196 NUTM2EB1AL46 878 aaPredicted RBP16.12■□□□□ 0.17
FGFR1-236ENST00000531196 POTEAQ6S8J7 498 aa16.12■□□□□ 0.17
FGFR1-236ENST00000531196 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
FGFR1-236ENST00000531196 C1orf167Q5SNV9 1468 aa16.11■□□□□ 0.17
FGFR1-236ENST00000531196 STK26Q9P289 416 aa16.11■□□□□ 0.17
FGFR1-236ENST00000531196 NHSL1Q5SYE7 1610 aa16.11■□□□□ 0.17
FGFR1-236ENST00000531196 LRRC59Q96AG4 307 aaKnown RBP16.1■□□□□ 0.17
FGFR1-236ENST00000531196 IFT172Q9UG01 1749 aa16.1■□□□□ 0.17
FGFR1-236ENST00000531196 DDX17Q92841 729 aaKnown RBP16.09■□□□□ 0.17
FGFR1-236ENST00000531196 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
FGFR1-236ENST00000531196 LRPPRCP42704 1394 aaKnown RBP16.08■□□□□ 0.16
FGFR1-236ENST00000531196 ZNF772Q68DY9 489 aaPredicted RBP16.07■□□□□ 0.16
FGFR1-236ENST00000531196 CDC42BPGQ6DT37 1551 aa16.07■□□□□ 0.16
FGFR1-236ENST00000531196 TECPR2O15040 1411 aa16.06■□□□□ 0.16
FGFR1-236ENST00000531196 TMEM132EQ6IEE7 984 aa16.06■□□□□ 0.16
FGFR1-236ENST00000531196 ORAI2Q96SN7 254 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms