RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 IQGAP3Q86VI3 1631 aa23.59■■□□□ 1.37
CTSB-220ENST00000531089 HDGFP51858 240 aaKnown RBP23.59■■□□□ 1.37
CTSB-220ENST00000531089 ZFYVE9O95405 1425 aa23.58■■□□□ 1.37
CTSB-220ENST00000531089 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.36
CTSB-220ENST00000531089 BCANQ96GW7 911 aa23.57■■□□□ 1.36
CTSB-220ENST00000531089 CHGAP10645 457 aaKnown RBP23.56■■□□□ 1.36
CTSB-220ENST00000531089 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
CTSB-220ENST00000531089 RIMS2Q9UQ26 1411 aa23.55■■□□□ 1.36
CTSB-220ENST00000531089 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
CTSB-220ENST00000531089 TMEM94Q12767 1356 aa23.54■■□□□ 1.36
CTSB-220ENST00000531089 RRBP1Q9P2E9 1410 aaKnown RBP23.54■■□□□ 1.36
CTSB-220ENST00000531089 SOCS7O14512 581 aa23.53■■□□□ 1.36
CTSB-220ENST00000531089 PLEKHG1Q9ULL1 1385 aa23.53■■□□□ 1.36
CTSB-220ENST00000531089 TBX22Q9Y458 520 aa23.52■■□□□ 1.36
CTSB-220ENST00000531089 NUTM2DQ5VT03 806 aaPredicted RBP23.51■■□□□ 1.35
CTSB-220ENST00000531089 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
CTSB-220ENST00000531089 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
CTSB-220ENST00000531089 CHD2O14647 1828 aaKnown RBP23.5■■□□□ 1.35
CTSB-220ENST00000531089 FAM135BQ49AJ0 1406 aa23.46■■□□□ 1.35
CTSB-220ENST00000531089 NWD1Q149M9 1564 aa23.45■■□□□ 1.35
CTSB-220ENST00000531089 MED1Q15648 1581 aaPredicted RBP23.45■■□□□ 1.34
CTSB-220ENST00000531089 NAIPQ13075 1403 aa23.44■■□□□ 1.34
CTSB-220ENST00000531089 ADAMTS13Q76LX8 1427 aa23.44■■□□□ 1.34
CTSB-220ENST00000531089 NKTRP30414 1462 aaKnown RBP23.43■■□□□ 1.34
CTSB-220ENST00000531089 SPHKAPQ2M3C7 1700 aa23.39■■□□□ 1.34
CTSB-220ENST00000531089 SLAIN2Q9P270 581 aa23.39■■□□□ 1.33
CTSB-220ENST00000531089 MSH6P52701 1360 aa23.37■■□□□ 1.33
CTSB-220ENST00000531089 PIK3R4Q99570 1358 aa23.36■■□□□ 1.33
CTSB-220ENST00000531089 NCOA3Q9Y6Q9 1424 aa23.34■■□□□ 1.33
CTSB-220ENST00000531089 ZNF326Q5BKZ1 582 aaKnown RBP23.34■■□□□ 1.33
CTSB-220ENST00000531089 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
CTSB-220ENST00000531089 AMOTL2Q9Y2J4 779 aa23.34■■□□□ 1.33
CTSB-220ENST00000531089 ROBO1Q9Y6N7 1651 aa23.34■■□□□ 1.33
CTSB-220ENST00000531089 PTPRUQ92729 1446 aa23.33■■□□□ 1.32
CTSB-220ENST00000531089 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
CTSB-220ENST00000531089 DIP2AQ14689 1571 aa23.32■■□□□ 1.32
CTSB-220ENST00000531089 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
CTSB-220ENST00000531089 C19orf44Q9H6X5 657 aa23.31■■□□□ 1.32
CTSB-220ENST00000531089 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
CTSB-220ENST00000531089 RGS17Q9UGC6 210 aaPredicted RBP23.29■■□□□ 1.32
CTSB-220ENST00000531089 NRXN3Q9Y4C0 1643 aa23.29■■□□□ 1.32
CTSB-220ENST00000531089 TRPM2O94759 1503 aa23.27■■□□□ 1.32
CTSB-220ENST00000531089 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
CTSB-220ENST00000531089 SLC4A1APQ9BWU0 796 aaKnown RBP23.27■■□□□ 1.32
CTSB-220ENST00000531089 KIF1BO60333 1816 aa23.27■■□□□ 1.32
CTSB-220ENST00000531089 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.26■■□□□ 1.31
CTSB-220ENST00000531089 SETBP1Q9Y6X0 1596 aa23.26■■□□□ 1.31
CTSB-220ENST00000531089 METP08581 1390 aa23.25■■□□□ 1.31
CTSB-220ENST00000531089 CADPS2Q86UW7 1296 aa23.25■■□□□ 1.31
CTSB-220ENST00000531089 NEXMIFQ5QGS0 1516 aa23.23■■□□□ 1.31
CTSB-220ENST00000531089 ATF3P18847 181 aa23.23■■□□□ 1.31
CTSB-220ENST00000531089 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
CTSB-220ENST00000531089 FOXD1Q16676 465 aa23.2■■□□□ 1.3
CTSB-220ENST00000531089 PHLPP1O60346 1717 aa23.2■■□□□ 1.3
CTSB-220ENST00000531089 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
CTSB-220ENST00000531089 RPGRIP1LQ68CZ1 1315 aa23.18■■□□□ 1.3
CTSB-220ENST00000531089 JCADQ9P266 1359 aa23.15■■□□□ 1.3
CTSB-220ENST00000531089 MPHOSPH9Q99550 1183 aa23.15■■□□□ 1.3
CTSB-220ENST00000531089 BRINP3Q76B58 766 aa23.14■■□□□ 1.29
CTSB-220ENST00000531089 POTEAQ6S8J7 498 aa23.13■■□□□ 1.29
CTSB-220ENST00000531089 COL16A1Q07092 1604 aaPredicted RBP23.12■■□□□ 1.29
CTSB-220ENST00000531089 DCCP43146 1447 aa23.1■■□□□ 1.29
CTSB-220ENST00000531089 SETD1AO15047 1707 aaKnown RBP23.09■■□□□ 1.29
CTSB-220ENST00000531089 PPLO60437 1756 aa23.09■■□□□ 1.29
CTSB-220ENST00000531089 AHDC1Q5TGY3 1603 aaPredicted RBP23.08■■□□□ 1.29
CTSB-220ENST00000531089 MST1RQ04912 1400 aa23.07■■□□□ 1.28
CTSB-220ENST00000531089 RGL3Q3MIN7 710 aa23.07■■□□□ 1.28
CTSB-220ENST00000531089 SPATA31A6Q5VVP1 1343 aa23.05■■□□□ 1.28
CTSB-220ENST00000531089 ADGRF5Q8IZF2 1346 aa23.05■■□□□ 1.28
CTSB-220ENST00000531089 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
CTSB-220ENST00000531089 ROBO2Q9HCK4 1378 aa23.04■■□□□ 1.28
CTSB-220ENST00000531089 ACIN1Q9UKV3 1341 aaKnown RBP23.04■■□□□ 1.28
CTSB-220ENST00000531089 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
CTSB-220ENST00000531089 SPATA31E1Q6ZUB1 1445 aa23.02■■□□□ 1.28
CTSB-220ENST00000531089 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
CTSB-220ENST00000531089 NALCNQ8IZF0 1738 aa23.01■■□□□ 1.27
CTSB-220ENST00000531089 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
CTSB-220ENST00000531089 ASXL1Q8IXJ9 1541 aa23■■□□□ 1.27
CTSB-220ENST00000531089 LRP6O75581 1613 aa23■■□□□ 1.27
CTSB-220ENST00000531089 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
CTSB-220ENST00000531089 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
CTSB-220ENST00000531089 LRRC59Q96AG4 307 aaKnown RBP22.99■■□□□ 1.27
CTSB-220ENST00000531089 PRAG1Q86YV5 1406 aa22.98■■□□□ 1.27
CTSB-220ENST00000531089 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
CTSB-220ENST00000531089 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
CTSB-220ENST00000531089 ORAI2Q96SN7 254 aa22.96■■□□□ 1.27
CTSB-220ENST00000531089 ANKRD30BQ9BXX2 1392 aa22.96■■□□□ 1.27
CTSB-220ENST00000531089 IFT172Q9UG01 1749 aa22.94■■□□□ 1.26
CTSB-220ENST00000531089 NUTM2BA6NNL0 878 aaPredicted RBP22.94■■□□□ 1.26
CTSB-220ENST00000531089 NUTM2EB1AL46 878 aaPredicted RBP22.94■■□□□ 1.26
CTSB-220ENST00000531089 MEX3CQ5U5Q3 659 aaKnown RBP22.94■■□□□ 1.26
CTSB-220ENST00000531089 TMEM132EQ6IEE7 984 aa22.94■■□□□ 1.26
CTSB-220ENST00000531089 NUTM2AQ8IVF1 878 aaPredicted RBP22.94■■□□□ 1.26
CTSB-220ENST00000531089 WAPLQ7Z5K2 1190 aa22.92■■□□□ 1.26
CTSB-220ENST00000531089 STK26Q9P289 416 aa22.92■■□□□ 1.26
CTSB-220ENST00000531089 RAB3GAP2Q9H2M9 1393 aa22.92■■□□□ 1.26
CTSB-220ENST00000531089 ZNF772Q68DY9 489 aaPredicted RBP22.9■■□□□ 1.26
CTSB-220ENST00000531089 ABCC11Q96J66 1382 aa22.89■■□□□ 1.25
CTSB-220ENST00000531089 C14orf93Q9H972 538 aaKnown RBP22.89■■□□□ 1.25
CTSB-220ENST00000531089 SOS2Q07890 1332 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms